RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 TRAPPC4Q9Y296 219 aa7.06□□□□□ -1.28
HDAC9-202ENST00000405010 FKBP7Q9Y680 259 aa7.06□□□□□ -1.28
HDAC9-202ENST00000405010 A0A0G2JLL6 359 aaPredicted RBP7.05□□□□□ -1.28
HDAC9-202ENST00000405010 A0A1W2PPL8 197 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 C2orf78A6NCI8 922 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 MTRF1O75570 445 aaKnown RBP7.05□□□□□ -1.28
HDAC9-202ENST00000405010 ARL6IP5O75915 188 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 DDNO94850 711 aaPredicted RBP7.05□□□□□ -1.28
HDAC9-202ENST00000405010 CELF2O95319 508 aaKnown RBP7.05□□□□□ -1.28
HDAC9-202ENST00000405010 ECDO95905 644 aaPredicted RBP7.05□□□□□ -1.28
HDAC9-202ENST00000405010 IFNGP01579 166 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 CD3GP09693 182 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 MAGEA11P43364 429 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 RGRP47804 291 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 CTBP2P56545 445 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 WDR5P61964 334 aaKnown RBP7.05□□□□□ -1.28
HDAC9-202ENST00000405010 HOXC5Q00444 222 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 UPP1Q16831 310 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 C4orf46Q504U0 113 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 PYHIN1Q6K0P9 492 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 WASH2PQ6VEQ5 465 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 RTL4Q6ZR62 310 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 CEACAM19Q7Z692 300 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 PRRT2Q7Z6L0 340 aaPredicted RBP7.05□□□□□ -1.28
HDAC9-202ENST00000405010 ADGRG2Q8IZP9 1017 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 TMIEQ8NEW7 156 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 RBPMSQ93062 196 aaKnown RBP7.05□□□□□ -1.28
HDAC9-202ENST00000405010 PDLIM5Q96HC4 596 aaKnown RBP7.05□□□□□ -1.28
HDAC9-202ENST00000405010 OR2M2Q96R28 347 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 CDCA4Q9BXL8 241 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 GABARAPL3Q9BY60 117 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 ZNF436Q9C0F3 470 aaPredicted RBP7.05□□□□□ -1.28
HDAC9-202ENST00000405010 ASAH2Q9NR71 780 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 ACOXLQ9NUZ1 547 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 KIAA1522Q9P206 1035 aaPredicted RBP7.05□□□□□ -1.28
HDAC9-202ENST00000405010 GLS2Q9UI32 602 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 BTNL2Q9UIR0 455 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 ZNF225Q9UK10 706 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 PADI2Q9Y2J8 665 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 NUBP2Q9Y5Y2 271 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 FOCADQ5VW36 1801 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 POM121CA8CG34 1229 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 DISC1C4P0D8 188 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 NCR1O76036 304 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 GASTP01350 101 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 TFP02787 698 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 URODP06132 367 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 AKR1A1P14550 325 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 HK1P19367 917 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 CBLP22681 906 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 ACRV1P26436 265 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 RPL4P36578 427 aaKnown RBP7.05□□□□□ -1.28
HDAC9-202ENST00000405010 ETV3P41162 512 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 MNDAP41218 407 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 EPHB3P54753 998 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 RPS25P62851 125 aaKnown RBP7.05□□□□□ -1.28
HDAC9-202ENST00000405010 GPR68Q15743 365 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 STK11Q15831 433 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 SWI5Q1ZZU3 235 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 FAHD1Q6P587 224 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 GPC2Q8N158 579 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 C2orf69Q8N8R5 385 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 FAM98AQ8NCA5 519 aaKnown RBP7.05□□□□□ -1.28
HDAC9-202ENST00000405010 RAET1EQ8TD07 263 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 ADAMTS15Q8TE58 950 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 DCLRE1CQ96SD1 692 aaKnown RBP7.05□□□□□ -1.28
HDAC9-202ENST00000405010 TSNAXQ99598 290 aaKnown RBP7.05□□□□□ -1.28
HDAC9-202ENST00000405010 AIF1LQ9BQI0 150 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 GSX2Q9BZM3 304 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.05□□□□□ -1.28
HDAC9-202ENST00000405010 ACTL8Q9H568 366 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 SNX11Q9Y5W9 270 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 CDH10Q9Y6N8 788 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 SCN1AP35498 2009 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 A0A0G2JN53 185 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 GABRR3A8MPY1 467 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 FAM227AF5H4B4 570 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 H7C0S8 307 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 FLRT2O43155 660 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 TPPPO94811 219 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 F2P00734 622 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 SERPINA3P01011 423 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 HSD3B1P14060 373 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 HSD3B2P26439 372 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 GKP32189 559 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 CSKP41240 450 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 GDI2P50395 445 aaKnown RBP7.05□□□□□ -1.28
HDAC9-202ENST00000405010 ETV1P50549 477 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 PIN1Q13526 163 aaPredicted RBP7.05□□□□□ -1.28
HDAC9-202ENST00000405010 CAMK1Q14012 370 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 PLK5Q496M5 336 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 GPRC6AQ5T6X5 926 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 OLFML2AQ68BL7 652 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 HMGN2P46Q86SG4 172 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 TMEM145Q8NBT3 493 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 DBF4BQ8NFT6 615 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 SLC25A46Q96AG3 418 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 OR10A4Q9H209 315 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 CSNK1G1Q9HCP0 422 aa7.05□□□□□ -1.28
HDAC9-202ENST00000405010 SLC35C2Q9NQQ7 365 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms