RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 OR1N1Q8NGS0 311 aa13.58□□□□□ -0.24
CDPF1-203ENST00000404583 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.58□□□□□ -0.24
CDPF1-203ENST00000404583 ZNF721Q8TF20 911 aa13.58□□□□□ -0.24
CDPF1-203ENST00000404583 THAP3Q8WTV1 239 aaPredicted RBP13.58□□□□□ -0.24
CDPF1-203ENST00000404583 KLHL29Q96CT2 875 aa13.58□□□□□ -0.24
CDPF1-203ENST00000404583 EGLN2Q96KS0 407 aa13.58□□□□□ -0.24
CDPF1-203ENST00000404583 PPP1R36Q96LQ0 422 aa13.58□□□□□ -0.24
CDPF1-203ENST00000404583 MANSC1Q9H8J5 431 aa13.58□□□□□ -0.24
CDPF1-203ENST00000404583 PNPOQ9NVS9 261 aa13.58□□□□□ -0.24
CDPF1-203ENST00000404583 LUZP4Q9P127 313 aa13.58□□□□□ -0.24
CDPF1-203ENST00000404583 ANAPC2Q9UJX6 822 aa13.58□□□□□ -0.24
CDPF1-203ENST00000404583 UTS2RQ9UKP6 389 aa13.58□□□□□ -0.24
CDPF1-203ENST00000404583 PSME2Q9UL46 239 aa13.58□□□□□ -0.24
CDPF1-203ENST00000404583 HEMK1Q9Y5R4 338 aaPredicted RBP13.58□□□□□ -0.24
CDPF1-203ENST00000404583 SUV39H1O43463 412 aa13.57□□□□□ -0.24
CDPF1-203ENST00000404583 PEX11AO75192 247 aa13.57□□□□□ -0.24
CDPF1-203ENST00000404583 SNUPNO95149 360 aaKnown RBP13.57□□□□□ -0.24
CDPF1-203ENST00000404583 WDPCPO95876 746 aa13.57□□□□□ -0.24
CDPF1-203ENST00000404583 CPMP14384 443 aa13.57□□□□□ -0.24
CDPF1-203ENST00000404583 PORP16435 677 aaPredicted RBP13.57□□□□□ -0.24
CDPF1-203ENST00000404583 DUSP2Q05923 314 aa13.57□□□□□ -0.24
CDPF1-203ENST00000404583 ZNF267Q14586 743 aaPredicted RBP13.57□□□□□ -0.24
CDPF1-203ENST00000404583 PLEKHN1Q494U1 663 aaPredicted RBP13.57□□□□□ -0.24
CDPF1-203ENST00000404583 ATG16L1Q676U5 607 aa13.57□□□□□ -0.24
CDPF1-203ENST00000404583 SLC6A19Q695T7 634 aa13.57□□□□□ -0.24
CDPF1-203ENST00000404583 FAM71E1Q6IPT2 247 aa13.57□□□□□ -0.24
CDPF1-203ENST00000404583 RPS19BP1Q86WX3 136 aaKnown RBP13.57□□□□□ -0.24
CDPF1-203ENST00000404583 TRIM42Q8IWZ5 723 aa13.57□□□□□ -0.24
CDPF1-203ENST00000404583 BEST3Q8N1M1 668 aa13.57□□□□□ -0.24
CDPF1-203ENST00000404583 HAS2Q92819 552 aa13.57□□□□□ -0.24
CDPF1-203ENST00000404583 RIT1Q92963 219 aa13.57□□□□□ -0.24
CDPF1-203ENST00000404583 CNRIP1Q96F85 164 aaPredicted RBP13.57□□□□□ -0.24
CDPF1-203ENST00000404583 SENP5Q96HI0 755 aaPredicted RBP13.57□□□□□ -0.24
CDPF1-203ENST00000404583 FCRL1Q96LA6 429 aa13.57□□□□□ -0.24
CDPF1-203ENST00000404583 PELOQ9BRX2 385 aaKnown RBP13.57□□□□□ -0.24
CDPF1-203ENST00000404583 CNPPD1Q9BV87 410 aa13.57□□□□□ -0.24
CDPF1-203ENST00000404583 LIN28AQ9H9Z2 209 aaKnown RBP13.57□□□□□ -0.24
CDPF1-203ENST00000404583 THAP1Q9NVV9 213 aa13.57□□□□□ -0.24
CDPF1-203ENST00000404583 HAO1Q9UJM8 370 aa13.57□□□□□ -0.24
CDPF1-203ENST00000404583 DYTNA2CJ06 578 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 J3QKU1 62 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 DYRK3O43781 588 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 SNNO75324 88 aaPredicted RBP13.56□□□□□ -0.24
CDPF1-203ENST00000404583 CT62P0C5K7 136 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 NT5EP21589 574 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 GALNSP34059 522 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 PTGER1P34995 402 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 GSTM5P46439 218 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 ERVK-8P63133 956 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 ARG2P78540 354 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 PRSS53Q2L4Q9 553 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 SPRED3Q2MJR0 410 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 Q6ZS92 163 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 RAB3IL1Q8TBN0 382 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 ZNF75CPQ92670 426 aaPredicted RBP13.56□□□□□ -0.24
CDPF1-203ENST00000404583 GFM2Q969S9 779 aaKnown RBP13.56□□□□□ -0.24
CDPF1-203ENST00000404583 EXOSC8Q96B26 276 aaKnown RBP13.56□□□□□ -0.24
CDPF1-203ENST00000404583 C19orf60Q96EN9 201 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 PPP3R2Q96LZ3 170 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 ZNF681Q96N22 645 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 CCT7Q99832 543 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 ACBD3Q9H3P7 528 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 MYNNQ9NPC7 610 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 BAIAP2L1Q9UHR4 511 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 EXO1Q9UQ84 846 aaKnown RBP13.56□□□□□ -0.24
CDPF1-203ENST00000404583 ERVK-19Q9WJR5 959 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 B3GNT3Q9Y2A9 372 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 TMED5Q9Y3A6 229 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 ZNF780BQ9Y6R6 833 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 ZFAND5O76080 213 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 IGKV3-11P04433 115 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 SDC1P18827 310 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 CSNK2A2P19784 350 aaPredicted RBP13.56□□□□□ -0.24
CDPF1-203ENST00000404583 DDCP20711 480 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 MLF1P58340 268 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 PPP2R2AP63151 447 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 RNF4P78317 190 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 ATP6AP1LQ52LC2 224 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 C6orf136Q5SQH8 315 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 HSDL2Q6YN16 418 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 C16orf47Q6ZP98 133 aaPredicted RBP13.56□□□□□ -0.24
CDPF1-203ENST00000404583 PRICKLE2Q7Z3G6 844 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 TICAM1Q8IUC6 712 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 CCDC116Q8IYX3 515 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 Q8NA96 180 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 CLHC1Q8NHS4 586 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 PNPLA2Q96AD5 504 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 TUBGCP3Q96CW5 907 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 FBXL20Q96IG2 436 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 ART5Q96L15 291 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 TSSK3Q96PN8 268 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 TRIM4Q9C037 500 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 CXorf21Q9HAI6 301 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 PFDN4Q9NQP4 134 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 SLC35C2Q9NQQ7 365 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 ANKRD10Q9NXR5 420 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 COPS7AQ9UBW8 275 aa13.56□□□□□ -0.24
CDPF1-203ENST00000404583 WBP11Q9Y2W2 641 aaKnown RBP13.56□□□□□ -0.24
CDPF1-203ENST00000404583 TMEM200CA6NKL6 621 aa13.55□□□□□ -0.24
CDPF1-203ENST00000404583 GABRR3A8MPY1 467 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms