RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 SLC26A5P58743 744 aa27.4■■□□□ 1.98
USP42-202ENST00000404008 Q0VFX4 171 aa27.4■■□□□ 1.98
USP42-202ENST00000404008 CHAF1BQ13112 559 aa27.4■■□□□ 1.98
USP42-202ENST00000404008 PLAG1Q6DJT9 500 aa27.4■■□□□ 1.98
USP42-202ENST00000404008 APLFQ8IW19 511 aaPredicted RBP27.4■■□□□ 1.98
USP42-202ENST00000404008 LRRC25Q8N386 305 aaPredicted RBP27.4■■□□□ 1.98
USP42-202ENST00000404008 AMER2Q8N7J2 671 aa27.4■■□□□ 1.98
USP42-202ENST00000404008 CLEC1AQ8NC01 280 aa27.4■■□□□ 1.98
USP42-202ENST00000404008 OR7A2PQ8NGA2 310 aa27.4■■□□□ 1.98
USP42-202ENST00000404008 OR14A16Q8NHC5 309 aa27.4■■□□□ 1.98
USP42-202ENST00000404008 NUDT8Q8WV74 236 aa27.4■■□□□ 1.98
USP42-202ENST00000404008 DAZLQ92904 295 aaKnown RBP27.4■■□□□ 1.98
USP42-202ENST00000404008 DPY30Q9C005 99 aa27.4■■□□□ 1.98
USP42-202ENST00000404008 KLHL14Q9P2G3 628 aa27.4■■□□□ 1.98
USP42-202ENST00000404008 MED13Q9UHV7 2174 aa27.4■■□□□ 1.98
USP42-202ENST00000404008 GMNCA6NCL1 334 aa27.39■■□□□ 1.98
USP42-202ENST00000404008 MYO1GB0I1T2 1018 aa27.39■■□□□ 1.98
USP42-202ENST00000404008 AIMP2Q13155 320 aaKnown RBP27.39■■□□□ 1.98
USP42-202ENST00000404008 EXT1Q16394 746 aa27.39■■□□□ 1.98
USP42-202ENST00000404008 COL28A1Q2UY09 1125 aa27.39■■□□□ 1.98
USP42-202ENST00000404008 RIT1Q92963 219 aa27.39■■□□□ 1.98
USP42-202ENST00000404008 RILPQ96NA2 401 aa27.39■■□□□ 1.98
USP42-202ENST00000404008 ATP13A2Q9NQ11 1180 aa27.39■■□□□ 1.98
USP42-202ENST00000404008 SH3BP4Q9P0V3 963 aa27.39■■□□□ 1.98
USP42-202ENST00000404008 G3BP2Q9UN86 482 aaKnown RBP27.39■■□□□ 1.98
USP42-202ENST00000404008 PPIEQ9UNP9 301 aaKnown RBP27.39■■□□□ 1.98
USP42-202ENST00000404008 ICAM2P13598 275 aa27.38■■□□□ 1.97
USP42-202ENST00000404008 DDX5P17844 614 aaKnown RBP27.38■■□□□ 1.97
USP42-202ENST00000404008 ARFIP2P53365 341 aa27.38■■□□□ 1.97
USP42-202ENST00000404008 NME5P56597 212 aa27.38■■□□□ 1.97
USP42-202ENST00000404008 SF3A3Q12874 501 aaKnown RBP eCLIP27.38■■□□□ 1.97
USP42-202ENST00000404008 MPEG1Q2M385 716 aa27.38■■□□□ 1.97
USP42-202ENST00000404008 SPRED3Q2MJR0 410 aa27.38■■□□□ 1.97
USP42-202ENST00000404008 BTBD16Q32M84 506 aa27.38■■□□□ 1.97
USP42-202ENST00000404008 PDCD4Q53EL6 469 aaKnown RBP27.38■■□□□ 1.97
USP42-202ENST00000404008 BORAQ6PGQ7 559 aa27.38■■□□□ 1.97
USP42-202ENST00000404008 GPR155Q7Z3F1 870 aa27.38■■□□□ 1.97
USP42-202ENST00000404008 CCDC116Q8IYX3 515 aa27.38■■□□□ 1.97
USP42-202ENST00000404008 B3GNT7Q8NFL0 401 aa27.38■■□□□ 1.97
USP42-202ENST00000404008 SUN3Q8TAQ9 357 aa27.38■■□□□ 1.97
USP42-202ENST00000404008 APOBEC4Q8WW27 367 aaKnown RBP27.38■■□□□ 1.97
USP42-202ENST00000404008 BBS4Q96RK4 519 aa27.38■■□□□ 1.97
USP42-202ENST00000404008 PRPF18Q99633 342 aaKnown RBP27.38■■□□□ 1.97
USP42-202ENST00000404008 CXorf21Q9HAI6 301 aa27.38■■□□□ 1.97
USP42-202ENST00000404008 SDR39U1Q9NRG7 319 aaPredicted RBP27.38■■□□□ 1.97
USP42-202ENST00000404008 ITGB2P05107 769 aa27.37■■□□□ 1.97
USP42-202ENST00000404008 CELA2AP08217 269 aa27.37■■□□□ 1.97
USP42-202ENST00000404008 UFM1P61960 85 aa27.37■■□□□ 1.97
USP42-202ENST00000404008 RPS6KA2Q15349 733 aa27.37■■□□□ 1.97
USP42-202ENST00000404008 TBR1Q16650 682 aa27.37■■□□□ 1.97
USP42-202ENST00000404008 CPTPQ5TA50 214 aa27.37■■□□□ 1.97
USP42-202ENST00000404008 CAMKMTQ7Z624 323 aa27.37■■□□□ 1.97
USP42-202ENST00000404008 MORN4Q8NDC4 146 aa27.37■■□□□ 1.97
USP42-202ENST00000404008 M1APQ8TC57 530 aa27.37■■□□□ 1.97
USP42-202ENST00000404008 CIDECQ96AQ7 238 aaPredicted RBP27.37■■□□□ 1.97
USP42-202ENST00000404008 COQ8BQ96D53 544 aa27.37■■□□□ 1.97
USP42-202ENST00000404008 TEX37Q96LM6 180 aa27.37■■□□□ 1.97
USP42-202ENST00000404008 SLAMF7Q9NQ25 335 aa27.37■■□□□ 1.97
USP42-202ENST00000404008 PDPK1O15530 556 aa27.36■■□□□ 1.97
USP42-202ENST00000404008 DDAH2O95865 285 aa27.36■■□□□ 1.97
USP42-202ENST00000404008 LAMP1P11279 417 aa27.36■■□□□ 1.97
USP42-202ENST00000404008 NT5EP21589 574 aa27.36■■□□□ 1.97
USP42-202ENST00000404008 DRD4P21917 467 aa27.36■■□□□ 1.97
USP42-202ENST00000404008 NTSP30990 170 aa27.36■■□□□ 1.97
USP42-202ENST00000404008 MPIP34949 423 aa27.36■■□□□ 1.97
USP42-202ENST00000404008 GPR143P51810 404 aa27.36■■□□□ 1.97
USP42-202ENST00000404008 PGDP52209 483 aa27.36■■□□□ 1.97
USP42-202ENST00000404008 CLNS1AP54105 237 aaKnown RBP27.36■■□□□ 1.97
USP42-202ENST00000404008 KBTBD2Q8IY47 623 aa27.36■■□□□ 1.97
USP42-202ENST00000404008 SLC2A12Q8TD20 617 aa27.36■■□□□ 1.97
USP42-202ENST00000404008 TESCQ96BS2 214 aa27.36■■□□□ 1.97
USP42-202ENST00000404008 NSRP1Q9H0G5 558 aaKnown RBP27.36■■□□□ 1.97
USP42-202ENST00000404008 CLMPQ9H6B4 373 aa27.36■■□□□ 1.97
USP42-202ENST00000404008 MMP25Q9NPA2 562 aa27.36■■□□□ 1.97
USP42-202ENST00000404008 ATAD3AQ9NVI7 634 aa27.36■■□□□ 1.97
USP42-202ENST00000404008 DOCK10Q96BY6 2186 aa27.36■■□□□ 1.97
USP42-202ENST00000404008 EPG5Q9HCE0 2579 aa27.36■■□□□ 1.97
USP42-202ENST00000404008 DYRK3O43781 588 aa27.35■■□□□ 1.97
USP42-202ENST00000404008 DNAJB5O75953 348 aa27.35■■□□□ 1.97
USP42-202ENST00000404008 SERPINA7P05543 415 aa27.35■■□□□ 1.97
USP42-202ENST00000404008 PTGER1P34995 402 aa27.35■■□□□ 1.97
USP42-202ENST00000404008 FRKP42685 505 aaPredicted RBP27.35■■□□□ 1.97
USP42-202ENST00000404008 MRPL19P49406 292 aaKnown RBP27.35■■□□□ 1.97
USP42-202ENST00000404008 SOX8P57073 446 aa27.35■■□□□ 1.97
USP42-202ENST00000404008 PRICKLE4Q2TBC4 344 aa27.35■■□□□ 1.97
USP42-202ENST00000404008 GALNT12Q8IXK2 581 aa27.35■■□□□ 1.97
USP42-202ENST00000404008 MIER2Q8N344 545 aa27.35■■□□□ 1.97
USP42-202ENST00000404008 APCDD1LQ8NCL9 501 aa27.35■■□□□ 1.97
USP42-202ENST00000404008 C10orf82Q8WW14 230 aa27.35■■□□□ 1.97
USP42-202ENST00000404008 FBXL20Q96IG2 436 aa27.35■■□□□ 1.97
USP42-202ENST00000404008 AMDHD1Q96NU7 426 aa27.35■■□□□ 1.97
USP42-202ENST00000404008 ZIM2Q9NZV7 527 aa27.35■■□□□ 1.97
USP42-202ENST00000404008 TRIM33Q9UPN9 1127 aa27.35■■□□□ 1.97
USP42-202ENST00000404008 HRKO00198 91 aa27.35■■□□□ 1.97
USP42-202ENST00000404008 CT62P0C5K7 136 aa27.35■■□□□ 1.97
USP42-202ENST00000404008 NCBP2P52298 156 aaKnown RBP eCLIP27.35■■□□□ 1.971e-6■□□□□ 9.8
USP42-202ENST00000404008 IRX1P78414 480 aaPredicted RBP27.35■■□□□ 1.97
USP42-202ENST00000404008 MGAT2Q10469 447 aa27.35■■□□□ 1.97
USP42-202ENST00000404008 LTB4RQ15722 352 aa27.35■■□□□ 1.97
USP42-202ENST00000404008 GALNT16Q8N428 558 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms