RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 OTCP00480 354 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 PDYNP01213 254 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 CRYABP02511 175 aaKnown RBP5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 KLK1P06870 262 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 FAM58BPP0C7Q3 252 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 NR2F6P10588 404 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 GP1BBP13224 206 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 CHN1P15882 459 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 TAC1P20366 129 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 NME2P22392 152 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 TRHRP34981 398 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 PTGER1P34995 402 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 HSD17B3P37058 310 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 SOX3P41225 446 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 STT3AP46977 705 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 MEOX1P50221 254 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 HTR6P50406 440 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 SSR4P51571 173 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 NR0B1P51843 470 aaKnown RBP5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 HK2P52789 917 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 GPR85P60893 370 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 HERVK_113P63132 956 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 IGLV3-21P80748 117 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 ALDH6A1Q02252 535 aaKnown RBP5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 CLCQ05315 142 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 IFT88Q13099 833 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 CUL3Q13618 768 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 SERTAD2Q14140 314 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 ZNF750Q32MQ0 723 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 ZNF678Q5SXM1 525 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 MRM1Q6IN84 353 aaKnown RBP5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 METTL2BQ6P1Q9 378 aaKnown RBP5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 SCIMPQ6UWF3 145 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 IL20RBQ6UXL0 311 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 HSDL2Q6YN16 418 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 COMMD6Q7Z4G1 85 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 NUDT13Q86X67 352 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 CYP4Z2PQ8N1L4 340 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 ARMC10Q8N2F6 343 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 TMEM156Q8N614 296 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 HORMAD2Q8N7B1 307 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 CDYL2Q8N8U2 506 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 TMEM178AQ8NBL3 297 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 MORN4Q8NDC4 146 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 OR2W6PQ8NHA6 318 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 OR14A16Q8NHC5 309 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 DNAJB8Q8NHS0 232 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 EPS8L3Q8TE67 593 aaKnown RBP5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 ZNF721Q8TF20 911 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 SELENOMQ8WWX9 145 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 DAZLQ92904 295 aaKnown RBP5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 MTBPQ96DY7 904 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 SENP5Q96HI0 755 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 DGAT2Q96PD7 388 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 KCNA7Q96RP8 456 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 RASL10BQ96S79 203 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 SERPINI1Q99574 410 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 CCDC77Q9BR77 488 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 CENPKQ9BS16 269 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 ERVK-6Q9BXR3 956 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 ELOVL6Q9H5J4 265 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 DDX31Q9H8H2 851 aaKnown RBP5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 ANKZF1Q9H8Y5 726 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 DEPPQ9NTK1 212 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 LYARQ9NX58 379 aaKnown RBP5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 PLEKHB1Q9UF11 243 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 PHF11Q9UIL8 331 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 NPIPA1Q9UND3 350 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 SLC12A4Q9UP95 1085 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 V9GYY5 206 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 MYO9AB2RTY4 2548 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 CREBBPQ92793 2442 aa5.35□□□□□ -1.55
HMGB1P20-201ENST00000402555 POLQO75417 2590 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 CACNA1CQ13936 2221 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 PINLYPA6NC86 204 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 WIPF3A6NGB9 483 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 A8MVJ9 347 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 G3V2L1 256 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 MANBAO00462 879 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 PEX1O43933 1283 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 OR10H2O60403 315 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 SEMA3DO95025 777 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 GPR75O95800 540 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 IGKV3-11P04433 115 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 STSP08842 583 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 COX7A2P14406 83 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 ALOX15P16050 662 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 ZNF24P17028 368 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 KRT15P19012 456 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 IMPDH1P20839 514 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 ATP5F1P24539 256 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 TLX1P31314 330 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 SSTR4P31391 388 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 BUD31P41223 144 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 PRKAA2P54646 552 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 VSNL1P62760 191 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 ERVK-8P63133 956 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 RNF4P78317 190 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 PLIN5Q00G26 463 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 170.9 ms