RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 PRAMEF2O60811 474 aa17.84■□□□□ 0.45
RTN4-207ENST00000402434 IL3P08700 152 aa17.84■□□□□ 0.45
RTN4-207ENST00000402434 NEFHP12036 1026 aa17.84■□□□□ 0.45
RTN4-207ENST00000402434 CPMP14384 443 aa17.84■□□□□ 0.45
RTN4-207ENST00000402434 PORP16435 677 aaPredicted RBP17.84■□□□□ 0.45
RTN4-207ENST00000402434 ZNF763Q0D2J5 394 aa17.84■□□□□ 0.45
RTN4-207ENST00000402434 SH2D4BQ5SQS7 431 aa17.84■□□□□ 0.45
RTN4-207ENST00000402434 OR5L2Q8NGL0 311 aa17.84■□□□□ 0.45
RTN4-207ENST00000402434 OR2T11Q8NH01 316 aa17.84■□□□□ 0.45
RTN4-207ENST00000402434 SUN3Q8TAQ9 357 aa17.84■□□□□ 0.45
RTN4-207ENST00000402434 C19orf60Q96EN9 201 aa17.84■□□□□ 0.45
RTN4-207ENST00000402434 ZNF681Q96N22 645 aa17.84■□□□□ 0.45
RTN4-207ENST00000402434 C1orf109Q9NX04 203 aa17.84■□□□□ 0.45
RTN4-207ENST00000402434 ZDHHC2Q9UIJ5 367 aa17.84■□□□□ 0.45
RTN4-207ENST00000402434 NTNG1Q9Y2I2 539 aa17.84■□□□□ 0.45
RTN4-207ENST00000402434 WBP11Q9Y2W2 641 aaKnown RBP17.84■□□□□ 0.45
RTN4-207ENST00000402434 YARS2Q9Y2Z4 477 aaKnown RBP17.84■□□□□ 0.45
RTN4-207ENST00000402434 COPG1Q9Y678 874 aaKnown RBP17.84■□□□□ 0.45
RTN4-207ENST00000402434 CROCCQ5TZA2 2017 aa17.84■□□□□ 0.45
RTN4-207ENST00000402434 TMEM120BA0PK00 339 aa17.83■□□□□ 0.45
RTN4-207ENST00000402434 PYCARD-AS1I3L0S3 204 aa17.83■□□□□ 0.45
RTN4-207ENST00000402434 SEC22BO75396 215 aa17.83■□□□□ 0.45
RTN4-207ENST00000402434 ITGA10O75578 1167 aa17.83■□□□□ 0.45
RTN4-207ENST00000402434 NEURL1O76050 574 aa17.83■□□□□ 0.45
RTN4-207ENST00000402434 WISP1O95388 367 aa17.83■□□□□ 0.45
RTN4-207ENST00000402434 ATP1B1P05026 303 aa17.83■□□□□ 0.45
RTN4-207ENST00000402434 LINC00032P0C843 101 aa17.83■□□□□ 0.45
RTN4-207ENST00000402434 H2AFXP16104 143 aaPredicted RBP17.83■□□□□ 0.45
RTN4-207ENST00000402434 CSNK2A2P19784 350 aaPredicted RBP17.83■□□□□ 0.45
RTN4-207ENST00000402434 CYB561P49447 251 aa17.83■□□□□ 0.45
RTN4-207ENST00000402434 ST13P50502 369 aaKnown RBP17.83■□□□□ 0.45
RTN4-207ENST00000402434 HLCSP50747 726 aa17.83■□□□□ 0.45
RTN4-207ENST00000402434 MAGOHP61326 146 aaKnown RBP17.83■□□□□ 0.45
RTN4-207ENST00000402434 HEPACAMQ14CZ8 416 aa17.83■□□□□ 0.45
RTN4-207ENST00000402434 OR1C1Q15619 314 aa17.83■□□□□ 0.45
RTN4-207ENST00000402434 CHI3L2Q15782 390 aa17.83■□□□□ 0.45
RTN4-207ENST00000402434 INAQ16352 499 aa17.83■□□□□ 0.45
RTN4-207ENST00000402434 ZNF750Q32MQ0 723 aa17.83■□□□□ 0.45
RTN4-207ENST00000402434 SPINK14Q6IE38 97 aa17.83■□□□□ 0.45
RTN4-207ENST00000402434 NOXRED1Q6NXP6 359 aa17.83■□□□□ 0.45
RTN4-207ENST00000402434 HORMAD2Q8N7B1 307 aa17.83■□□□□ 0.45
RTN4-207ENST00000402434 PPP1R14CQ8TAE6 165 aa17.83■□□□□ 0.45
RTN4-207ENST00000402434 TWIST2Q8WVJ9 160 aa17.83■□□□□ 0.45
RTN4-207ENST00000402434 SIGLEC12Q96PQ1 595 aa17.83■□□□□ 0.45
RTN4-207ENST00000402434 EBPLQ9BY08 206 aa17.83■□□□□ 0.45
RTN4-207ENST00000402434 LRTM1Q9HBL6 345 aa17.83■□□□□ 0.45
RTN4-207ENST00000402434 ASF1BQ9NVP2 202 aa17.83■□□□□ 0.45
RTN4-207ENST00000402434 EHD3Q9NZN3 535 aa17.83■□□□□ 0.45
RTN4-207ENST00000402434 LRFN1Q9P244 771 aa17.83■□□□□ 0.45
RTN4-207ENST00000402434 TMEM114B3SHH9 223 aa17.82■□□□□ 0.44
RTN4-207ENST00000402434 ITM2AO43736 263 aa17.82■□□□□ 0.44
RTN4-207ENST00000402434 SNUPNO95149 360 aaKnown RBP17.82■□□□□ 0.44
RTN4-207ENST00000402434 GRK2P25098 689 aa17.82■□□□□ 0.44
RTN4-207ENST00000402434 ALDH9A1P49189 494 aa17.82■□□□□ 0.44
RTN4-207ENST00000402434 HK2P52789 917 aa17.82■□□□□ 0.44
RTN4-207ENST00000402434 SLC37A1P57057 533 aa17.82■□□□□ 0.44
RTN4-207ENST00000402434 WDR4P57081 412 aaKnown RBP17.82■□□□□ 0.44
RTN4-207ENST00000402434 ERVK-8P63133 956 aa17.82■□□□□ 0.44
RTN4-207ENST00000402434 OC90Q02509 493 aaPredicted RBP17.82■□□□□ 0.44
RTN4-207ENST00000402434 ZNF267Q14586 743 aaPredicted RBP17.82■□□□□ 0.44
RTN4-207ENST00000402434 ZNF227Q86WZ6 799 aa17.82■□□□□ 0.44
RTN4-207ENST00000402434 GALNT12Q8IXK2 581 aa17.82■□□□□ 0.44
RTN4-207ENST00000402434 C9orf40Q8IXQ3 194 aa17.82■□□□□ 0.44
RTN4-207ENST00000402434 NUBPLQ8TB37 319 aa17.82■□□□□ 0.44
RTN4-207ENST00000402434 KLHL29Q96CT2 875 aa17.82■□□□□ 0.44
RTN4-207ENST00000402434 CNRIP1Q96F85 164 aaPredicted RBP17.82■□□□□ 0.44
RTN4-207ENST00000402434 FCRL1Q96LA6 429 aa17.82■□□□□ 0.44
RTN4-207ENST00000402434 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.82■□□□□ 0.442e-17■■□□□ 11.9
RTN4-207ENST00000402434 UTS2RQ9UKP6 389 aa17.82■□□□□ 0.44
RTN4-207ENST00000402434 ERVK-19Q9WJR5 959 aa17.82■□□□□ 0.44
RTN4-207ENST00000402434 PIP5K1BO14986 540 aa17.82■□□□□ 0.44
RTN4-207ENST00000402434 LSM1O15116 133 aaKnown RBP17.82■□□□□ 0.44
RTN4-207ENST00000402434 ERAL1O75616 437 aaKnown RBP17.82■□□□□ 0.44
RTN4-207ENST00000402434 OR2J2O76002 312 aa17.82■□□□□ 0.44
RTN4-207ENST00000402434 CLPSP04118 112 aa17.82■□□□□ 0.44
RTN4-207ENST00000402434 FEN1P39748 380 aaKnown RBP17.82■□□□□ 0.44
RTN4-207ENST00000402434 ABCE1P61221 599 aaKnown RBP17.82■□□□□ 0.44
RTN4-207ENST00000402434 FUT7Q11130 342 aa17.82■□□□□ 0.44
RTN4-207ENST00000402434 NR6A1Q15406 480 aa17.82■□□□□ 0.44
RTN4-207ENST00000402434 MPEG1Q2M385 716 aa17.82■□□□□ 0.44
RTN4-207ENST00000402434 RFTN2Q52LD8 501 aaPredicted RBP17.82■□□□□ 0.44
RTN4-207ENST00000402434 XKR7Q5GH72 579 aa17.82■□□□□ 0.44
RTN4-207ENST00000402434 ZNF766Q5HY98 468 aa17.82■□□□□ 0.44
RTN4-207ENST00000402434 FAM71E1Q6IPT2 247 aa17.82■□□□□ 0.44
RTN4-207ENST00000402434 C16orf47Q6ZP98 133 aaPredicted RBP17.82■□□□□ 0.44
RTN4-207ENST00000402434 GALNT11Q8NCW6 608 aa17.82■□□□□ 0.44
RTN4-207ENST00000402434 AGR3Q8TD06 166 aa17.82■□□□□ 0.44
RTN4-207ENST00000402434 SCMH1Q96GD3 660 aa17.82■□□□□ 0.44
RTN4-207ENST00000402434 CCT7Q99832 543 aa17.82■□□□□ 0.44
RTN4-207ENST00000402434 CNPPD1Q9BV87 410 aa17.82■□□□□ 0.44
RTN4-207ENST00000402434 C20orf27Q9GZN8 174 aa17.82■□□□□ 0.44
RTN4-207ENST00000402434 LIN28AQ9H9Z2 209 aaKnown RBP17.82■□□□□ 0.44
RTN4-207ENST00000402434 MYNNQ9NPC7 610 aa17.82■□□□□ 0.44
RTN4-207ENST00000402434 ARGLU1Q9NWB6 273 aaPredicted RBP17.82■□□□□ 0.44
RTN4-207ENST00000402434 TAS2R7Q9NYW3 318 aa17.82■□□□□ 0.44
RTN4-207ENST00000402434 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.82■□□□□ 0.44
RTN4-207ENST00000402434 POLR3HQ9Y535 204 aaPredicted RBP17.82■□□□□ 0.44
RTN4-207ENST00000402434 ZNF780BQ9Y6R6 833 aa17.82■□□□□ 0.44
RTN4-207ENST00000402434 UBR5O95071 2799 aaPredicted RBP17.81■□□□□ 0.44
RTN4-207ENST00000402434 LYPLA1O75608 230 aaPredicted RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms