RNA–Protein interactions for RNA: ENST00000401394.5

CTCF-202, Transcript of CCCTC-binding factor, humanhuman

TSL 1 (best) BASIC

Gene CTCF, Length 2,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-202ENST00000401394 RAB8AP61006 207 aa19.9■□□□□ 0.78
CTCF-202ENST00000401394 FABP5Q01469 135 aa19.9■□□□□ 0.78
CTCF-202ENST00000401394 SPIN4Q56A73 249 aa19.9■□□□□ 0.78
CTCF-202ENST00000401394 DCST1Q5T197 706 aa19.9■□□□□ 0.78
CTCF-202ENST00000401394 ADGRF3Q8IZF5 1079 aa19.9■□□□□ 0.78
CTCF-202ENST00000401394 APOBEC4Q8WW27 367 aaKnown RBP19.9■□□□□ 0.78
CTCF-202ENST00000401394 REPS1Q96D71 796 aa19.9■□□□□ 0.78
CTCF-202ENST00000401394 MACROD1Q9BQ69 325 aa19.9■□□□□ 0.78
CTCF-202ENST00000401394 BHLHE41Q9C0J9 482 aaPredicted RBP19.9■□□□□ 0.78
CTCF-202ENST00000401394 DMRT3Q9NQL9 472 aa19.9■□□□□ 0.78
CTCF-202ENST00000401394 ALG5Q9Y673 324 aa19.9■□□□□ 0.78
CTCF-202ENST00000401394 GLOD5A6NK44 160 aa19.9■□□□□ 0.78
CTCF-202ENST00000401394 NEDD8-MDP1E9PL57 170 aa19.9■□□□□ 0.78
CTCF-202ENST00000401394 CTBP2P56545 445 aa19.9■□□□□ 0.78
CTCF-202ENST00000401394 RHAGQ02094 409 aa19.9■□□□□ 0.78
CTCF-202ENST00000401394 SLC35F1Q5T1Q4 408 aa19.9■□□□□ 0.78
CTCF-202ENST00000401394 C11orf96Q7Z7L8 435 aa19.9■□□□□ 0.78
CTCF-202ENST00000401394 NPAS4Q8IUM7 802 aa19.9■□□□□ 0.78
CTCF-202ENST00000401394 SLC9A6Q92581 669 aa19.9■□□□□ 0.78
CTCF-202ENST00000401394 EXOSC8Q96B26 276 aaKnown RBP19.9■□□□□ 0.78
CTCF-202ENST00000401394 TMED9Q9BVK6 235 aa19.9■□□□□ 0.78
CTCF-202ENST00000401394 SLC22A4Q9H015 551 aa19.9■□□□□ 0.78
CTCF-202ENST00000401394 ATP6V1HQ9UI12 483 aa19.9■□□□□ 0.78
CTCF-202ENST00000401394 CORO2BQ9UQ03 480 aa19.9■□□□□ 0.78
CTCF-202ENST00000401394 FEZF1A0PJY2 475 aa19.89■□□□□ 0.78
CTCF-202ENST00000401394 SH3D21A4FU49 640 aa19.89■□□□□ 0.78
CTCF-202ENST00000401394 CTSAP10619 480 aa19.89■□□□□ 0.78
CTCF-202ENST00000401394 PPIBP23284 216 aaKnown RBP19.89■□□□□ 0.78
CTCF-202ENST00000401394 AVPR1BP47901 424 aa19.89■□□□□ 0.78
CTCF-202ENST00000401394 GINS1Q14691 196 aa19.89■□□□□ 0.78
CTCF-202ENST00000401394 HEPACAMQ14CZ8 416 aa19.89■□□□□ 0.78
CTCF-202ENST00000401394 FAM71E1Q6IPT2 247 aa19.89■□□□□ 0.78
CTCF-202ENST00000401394 CAMKMTQ7Z624 323 aa19.89■□□□□ 0.78
CTCF-202ENST00000401394 SLC30A8Q8IWU4 369 aa19.89■□□□□ 0.78
CTCF-202ENST00000401394 OXR1Q8N573 874 aa19.89■□□□□ 0.78
CTCF-202ENST00000401394 UPRTQ96BW1 309 aa19.89■□□□□ 0.78
CTCF-202ENST00000401394 SENP5Q96HI0 755 aaPredicted RBP19.89■□□□□ 0.78
CTCF-202ENST00000401394 SERHL2Q9H4I8 314 aa19.89■□□□□ 0.78
CTCF-202ENST00000401394 TBC1D17Q9HA65 648 aa19.89■□□□□ 0.78
CTCF-202ENST00000401394 COQ3Q9NZJ6 369 aa19.89■□□□□ 0.78
CTCF-202ENST00000401394 SEC14L4Q9UDX3 406 aa19.89■□□□□ 0.78
CTCF-202ENST00000401394 TMCC3Q9ULS5 477 aa19.89■□□□□ 0.78
CTCF-202ENST00000401394 GRIP1Q9Y3R0 1128 aa19.89■□□□□ 0.78
CTCF-202ENST00000401394 GSAPA4D1B5 854 aa19.89■□□□□ 0.77
CTCF-202ENST00000401394 FCHO2Q0JRZ9 810 aa19.89■□□□□ 0.77
CTCF-202ENST00000401394 SYT14P1Q58G82 188 aa19.89■□□□□ 0.77
CTCF-202ENST00000401394 PODNL1Q6PEZ8 512 aa19.89■□□□□ 0.77
CTCF-202ENST00000401394 ZER1Q7Z7L7 766 aa19.89■□□□□ 0.77
CTCF-202ENST00000401394 ENKURQ8TC29 256 aa19.89■□□□□ 0.77
CTCF-202ENST00000401394 MRPS31Q92665 395 aaKnown RBP19.89■□□□□ 0.77
CTCF-202ENST00000401394 FZD3Q9NPG1 666 aa19.89■□□□□ 0.77
CTCF-202ENST00000401394 STARD7Q9NQZ5 370 aa19.89■□□□□ 0.77
CTCF-202ENST00000401394 NPAP1Q9NZP6 1156 aa19.89■□□□□ 0.77
CTCF-202ENST00000401394 C5orf58C9J3I9 102 aa19.89■□□□□ 0.77
CTCF-202ENST00000401394 GTPBP1O00178 669 aaKnown RBP19.89■□□□□ 0.77
CTCF-202ENST00000401394 ABLIM3O94929 683 aa19.89■□□□□ 0.77
CTCF-202ENST00000401394 EPHX1P07099 455 aa19.89■□□□□ 0.77
CTCF-202ENST00000401394 MMP11P24347 488 aa19.89■□□□□ 0.77
CTCF-202ENST00000401394 EVI2BP34910 448 aa19.89■□□□□ 0.77
CTCF-202ENST00000401394 TMEM215Q68D42 235 aa19.89■□□□□ 0.77
CTCF-202ENST00000401394 IL20RBQ6UXL0 311 aa19.89■□□□□ 0.77
CTCF-202ENST00000401394 IQCHQ86VS3 1027 aa19.89■□□□□ 0.77
CTCF-202ENST00000401394 TMC8Q8IU68 726 aa19.89■□□□□ 0.77
CTCF-202ENST00000401394 VWA5B2Q8N398 1253 aa19.89■□□□□ 0.77
CTCF-202ENST00000401394 PCSK9Q8NBP7 692 aaKnown RBP19.89■□□□□ 0.77
CTCF-202ENST00000401394 OR2A12Q8NGT7 310 aa19.89■□□□□ 0.77
CTCF-202ENST00000401394 OR56A3Q8NH54 315 aa19.89■□□□□ 0.77
CTCF-202ENST00000401394 TMEM169Q96HH4 297 aa19.89■□□□□ 0.77
CTCF-202ENST00000401394 ART5Q96L15 291 aa19.89■□□□□ 0.77
CTCF-202ENST00000401394 F2RL3Q96RI0 385 aa19.89■□□□□ 0.77
CTCF-202ENST00000401394 MND1Q9BWT6 205 aa19.89■□□□□ 0.77
CTCF-202ENST00000401394 TMEM38AQ9H6F2 299 aa19.89■□□□□ 0.77
CTCF-202ENST00000401394 ANGPT4Q9Y264 503 aa19.89■□□□□ 0.77
CTCF-202ENST00000401394 GSTM5P46439 218 aa19.88■□□□□ 0.77
CTCF-202ENST00000401394 TMEM115Q12893 351 aaPredicted RBP19.88■□□□□ 0.77
CTCF-202ENST00000401394 SP140Q13342 867 aa19.88■□□□□ 0.77
CTCF-202ENST00000401394 REEP3Q6NUK4 255 aa19.88■□□□□ 0.77
CTCF-202ENST00000401394 CNIH2Q6PI25 160 aa19.88■□□□□ 0.77
CTCF-202ENST00000401394 KRT73Q86Y46 540 aa19.88■□□□□ 0.77
CTCF-202ENST00000401394 C2orf15Q8WU43 125 aaKnown RBP19.88■□□□□ 0.77
CTCF-202ENST00000401394 ZFPM2Q8WW38 1151 aa19.88■□□□□ 0.77
CTCF-202ENST00000401394 XAGE5Q8WWM1 108 aa19.88■□□□□ 0.77
CTCF-202ENST00000401394 ARSGQ96EG1 525 aa19.88■□□□□ 0.77
CTCF-202ENST00000401394 BRF2Q9HAW0 419 aa19.88■□□□□ 0.77
CTCF-202ENST00000401394 POLR1CO15160 346 aaPredicted RBP19.88■□□□□ 0.77
CTCF-202ENST00000401394 CTSLP07711 333 aa19.88■□□□□ 0.77
CTCF-202ENST00000401394 PRKAG1P54619 331 aa19.88■□□□□ 0.77
CTCF-202ENST00000401394 FAM20CQ8IXL6 584 aa19.88■□□□□ 0.77
CTCF-202ENST00000401394 ACOXLQ9NUZ1 547 aa19.88■□□□□ 0.77
CTCF-202ENST00000401394 MCUBQ9NWR8 336 aa19.88■□□□□ 0.77
CTCF-202ENST00000401394 A0A1W2PQ45 241 aaPredicted RBP19.87■□□□□ 0.77
CTCF-202ENST00000401394 A0A1W2PQY0 241 aa19.87■□□□□ 0.77
CTCF-202ENST00000401394 A0A1W2PS29 197 aa19.87■□□□□ 0.77
CTCF-202ENST00000401394 SERTM1A2A2V5 107 aa19.87■□□□□ 0.77
CTCF-202ENST00000401394 PLOD3O60568 738 aa19.87■□□□□ 0.77
CTCF-202ENST00000401394 TBX6O95947 436 aaPredicted RBP19.87■□□□□ 0.77
CTCF-202ENST00000401394 CATP04040 527 aaKnown RBP19.87■□□□□ 0.77
CTCF-202ENST00000401394 YES1P07947 543 aa19.87■□□□□ 0.77
CTCF-202ENST00000401394 DGKGP49619 791 aa19.87■□□□□ 0.77
CTCF-202ENST00000401394 C21orf58P58505 322 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms