RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 WISP2O76076 250 aa13.08□□□□□ -0.32
HLA-DQB1-202ENST00000399079 RASAL1O95294 804 aa13.08□□□□□ -0.32
HLA-DQB1-202ENST00000399079 BPGMP07738 259 aa13.08□□□□□ -0.32
HLA-DQB1-202ENST00000399079 IL3P08700 152 aa13.08□□□□□ -0.32
HLA-DQB1-202ENST00000399079 CT62P0C5K7 136 aa13.08□□□□□ -0.32
HLA-DQB1-202ENST00000399079 CPMP14384 443 aa13.08□□□□□ -0.32
HLA-DQB1-202ENST00000399079 TIA1P31483 386 aaKnown RBP eCLIP13.08□□□□□ -0.32
HLA-DQB1-202ENST00000399079 TRHRP34981 398 aaPredicted RBP13.08□□□□□ -0.32
HLA-DQB1-202ENST00000399079 FEN1P39748 380 aaKnown RBP13.08□□□□□ -0.32
HLA-DQB1-202ENST00000399079 ASPHQ12797 758 aa13.08□□□□□ -0.32
HLA-DQB1-202ENST00000399079 MPP2Q14168 576 aa13.08□□□□□ -0.32
HLA-DQB1-202ENST00000399079 MAPKAPK3Q16644 382 aa13.08□□□□□ -0.32
HLA-DQB1-202ENST00000399079 GALNTL5Q7Z4T8 443 aa13.08□□□□□ -0.32
HLA-DQB1-202ENST00000399079 TMEM156Q8N614 296 aa13.08□□□□□ -0.32
HLA-DQB1-202ENST00000399079 C7orf57Q8NEG2 295 aa13.08□□□□□ -0.32
HLA-DQB1-202ENST00000399079 AGR3Q8TD06 166 aa13.08□□□□□ -0.32
HLA-DQB1-202ENST00000399079 SCMH1Q96GD3 660 aa13.08□□□□□ -0.32
HLA-DQB1-202ENST00000399079 TRMOQ9BU70 441 aa13.08□□□□□ -0.32
HLA-DQB1-202ENST00000399079 TUBB1Q9H4B7 451 aa13.08□□□□□ -0.32
HLA-DQB1-202ENST00000399079 CXorf21Q9HAI6 301 aa13.08□□□□□ -0.32
HLA-DQB1-202ENST00000399079 YARS2Q9Y2Z4 477 aaKnown RBP13.08□□□□□ -0.32
HLA-DQB1-202ENST00000399079 CCL27Q9Y4X3 112 aa13.08□□□□□ -0.32
HLA-DQB1-202ENST00000399079 DNAJC15Q9Y5T4 150 aa13.08□□□□□ -0.32
HLA-DQB1-202ENST00000399079 SVILO95425 2214 aa13.07□□□□□ -0.32
HLA-DQB1-202ENST00000399079 WDR91A4D1P6 747 aa13.07□□□□□ -0.32
HLA-DQB1-202ENST00000399079 NPHS1O60500 1241 aa13.07□□□□□ -0.32
HLA-DQB1-202ENST00000399079 CLPSP04118 112 aa13.07□□□□□ -0.32
HLA-DQB1-202ENST00000399079 SP1P08047 785 aa13.07□□□□□ -0.32
HLA-DQB1-202ENST00000399079 ANXA4P09525 319 aaPredicted RBP13.07□□□□□ -0.32
HLA-DQB1-202ENST00000399079 CD46P15529 392 aa13.07□□□□□ -0.32
HLA-DQB1-202ENST00000399079 SSTR4P31391 388 aa13.07□□□□□ -0.32
HLA-DQB1-202ENST00000399079 SSR4P51571 173 aa13.07□□□□□ -0.32
HLA-DQB1-202ENST00000399079 TRA2BP62995 288 aaKnown RBP13.07□□□□□ -0.32
HLA-DQB1-202ENST00000399079 DUSP2Q05923 314 aa13.07□□□□□ -0.32
HLA-DQB1-202ENST00000399079 SRSF1Q07955 248 aaKnown RBP eCLIP13.07□□□□□ -0.32
HLA-DQB1-202ENST00000399079 SPRED3Q2MJR0 410 aa13.07□□□□□ -0.32
HLA-DQB1-202ENST00000399079 CES4AQ5XG92 561 aa13.07□□□□□ -0.32
HLA-DQB1-202ENST00000399079 GALNT18Q6P9A2 607 aa13.07□□□□□ -0.32
HLA-DQB1-202ENST00000399079 LRIG3Q6UXM1 1119 aa13.07□□□□□ -0.32
HLA-DQB1-202ENST00000399079 MDGA2Q7Z553 956 aa13.07□□□□□ -0.32
HLA-DQB1-202ENST00000399079 HORMAD2Q8N7B1 307 aa13.07□□□□□ -0.32
HLA-DQB1-202ENST00000399079 BCORP1Q8N888 145 aa13.07□□□□□ -0.32
HLA-DQB1-202ENST00000399079 OR2T11Q8NH01 316 aa13.07□□□□□ -0.32
HLA-DQB1-202ENST00000399079 OR8K3Q8NH51 312 aa13.07□□□□□ -0.32
HLA-DQB1-202ENST00000399079 C16orf78Q8WTQ4 265 aa13.07□□□□□ -0.32
HLA-DQB1-202ENST00000399079 KLHL29Q96CT2 875 aa13.07□□□□□ -0.32
HLA-DQB1-202ENST00000399079 PGM2Q96G03 612 aa13.07□□□□□ -0.32
HLA-DQB1-202ENST00000399079 C5orf34Q96MH7 638 aa13.07□□□□□ -0.32
HLA-DQB1-202ENST00000399079 RASL10BQ96S79 203 aa13.07□□□□□ -0.32
HLA-DQB1-202ENST00000399079 PELOQ9BRX2 385 aaKnown RBP13.07□□□□□ -0.32
HLA-DQB1-202ENST00000399079 TRIM45Q9H8W5 580 aaPredicted RBP13.07□□□□□ -0.32
HLA-DQB1-202ENST00000399079 RRAGDQ9NQL2 400 aaPredicted RBP13.07□□□□□ -0.32
HLA-DQB1-202ENST00000399079 OLAHQ9NV23 265 aa13.07□□□□□ -0.32
HLA-DQB1-202ENST00000399079 POLR3HQ9Y535 204 aaPredicted RBP13.07□□□□□ -0.32
HLA-DQB1-202ENST00000399079 PCDHGB6Q9Y5F9 930 aa13.07□□□□□ -0.32
HLA-DQB1-202ENST00000399079 ESPL1Q14674 2120 aa13.06□□□□□ -0.32
HLA-DQB1-202ENST00000399079 ANKUB1A6NFN9 424 aa13.06□□□□□ -0.32
HLA-DQB1-202ENST00000399079 OR6B1O95007 311 aa13.06□□□□□ -0.32
HLA-DQB1-202ENST00000399079 LINC00032P0C843 101 aa13.06□□□□□ -0.32
HLA-DQB1-202ENST00000399079 PORP16435 677 aaPredicted RBP13.06□□□□□ -0.32
HLA-DQB1-202ENST00000399079 GALNSP34059 522 aa13.06□□□□□ -0.32
HLA-DQB1-202ENST00000399079 SOX3P41225 446 aa13.06□□□□□ -0.32
HLA-DQB1-202ENST00000399079 SERPINB4P48594 390 aa13.06□□□□□ -0.32
HLA-DQB1-202ENST00000399079 SLC37A1P57057 533 aa13.06□□□□□ -0.32
HLA-DQB1-202ENST00000399079 INAQ16352 499 aa13.06□□□□□ -0.32
HLA-DQB1-202ENST00000399079 UGT3A2Q3SY77 523 aa13.06□□□□□ -0.32
HLA-DQB1-202ENST00000399079 SH2D4BQ5SQS7 431 aa13.06□□□□□ -0.32
HLA-DQB1-202ENST00000399079 KANK2Q63ZY3 851 aa13.06□□□□□ -0.32
HLA-DQB1-202ENST00000399079 ZNF324BQ6AW86 544 aaPredicted RBP13.06□□□□□ -0.32
HLA-DQB1-202ENST00000399079 SLC25A25Q6KCM7 469 aa13.06□□□□□ -0.32
HLA-DQB1-202ENST00000399079 IL20RBQ6UXL0 311 aa13.06□□□□□ -0.32
HLA-DQB1-202ENST00000399079 Q6ZSR9 355 aa13.06□□□□□ -0.32
HLA-DQB1-202ENST00000399079 NUDCD3Q8IVD9 361 aa13.06□□□□□ -0.32
HLA-DQB1-202ENST00000399079 GALNT12Q8IXK2 581 aa13.06□□□□□ -0.32
HLA-DQB1-202ENST00000399079 CYP4Z2PQ8N1L4 340 aa13.06□□□□□ -0.32
HLA-DQB1-202ENST00000399079 CDC26Q8NHZ8 85 aa13.06□□□□□ -0.32
HLA-DQB1-202ENST00000399079 PRR7Q8TB68 274 aa13.06□□□□□ -0.32
HLA-DQB1-202ENST00000399079 CNRIP1Q96F85 164 aaPredicted RBP13.06□□□□□ -0.32
HLA-DQB1-202ENST00000399079 ART5Q96L15 291 aa13.06□□□□□ -0.32
HLA-DQB1-202ENST00000399079 GAL3ST4Q96RP7 486 aa13.06□□□□□ -0.32
HLA-DQB1-202ENST00000399079 SLX1AQ9BQ83 275 aa13.06□□□□□ -0.32
HLA-DQB1-202ENST00000399079 FAIM2Q9BWQ8 316 aa13.06□□□□□ -0.32
HLA-DQB1-202ENST00000399079 SSU72Q9NP77 194 aaKnown RBP13.06□□□□□ -0.32
HLA-DQB1-202ENST00000399079 KCNK9Q9NPC2 374 aa13.06□□□□□ -0.32
HLA-DQB1-202ENST00000399079 SIRT5Q9NXA8 310 aa13.06□□□□□ -0.32
HLA-DQB1-202ENST00000399079 UTS2RQ9UKP6 389 aa13.06□□□□□ -0.32
HLA-DQB1-202ENST00000399079 TRAF6Q9Y4K3 522 aa13.06□□□□□ -0.32
HLA-DQB1-202ENST00000399079 GOLGA6L10A6NI86 522 aa13.05□□□□□ -0.32
HLA-DQB1-202ENST00000399079 NME2P1O60361 137 aa13.05□□□□□ -0.32
HLA-DQB1-202ENST00000399079 SEC22BO75396 215 aa13.05□□□□□ -0.32
HLA-DQB1-202ENST00000399079 RSL1D1O76021 490 aaKnown RBP13.05□□□□□ -0.32
HLA-DQB1-202ENST00000399079 FGF4P08620 206 aa13.05□□□□□ -0.32
HLA-DQB1-202ENST00000399079 NT5EP21589 574 aa13.05□□□□□ -0.32
HLA-DQB1-202ENST00000399079 NME2P22392 152 aa13.05□□□□□ -0.32
HLA-DQB1-202ENST00000399079 MST1P26927 711 aa13.05□□□□□ -0.32
HLA-DQB1-202ENST00000399079 KIAA0040Q15053 153 aa13.05□□□□□ -0.32
HLA-DQB1-202ENST00000399079 RNF111Q6ZNA4 994 aa13.05□□□□□ -0.32
HLA-DQB1-202ENST00000399079 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.05□□□□□ -0.32
HLA-DQB1-202ENST00000399079 CLYBLQ8N0X4 340 aa13.05□□□□□ -0.32
HLA-DQB1-202ENST00000399079 TMEM178AQ8NBL3 297 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms