RNA–Protein interactions for RNA: ENST00000399050.8

CTNND1-205, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-205ENST00000399050 SHMT2P34897 504 aa8.27□□□□□ -1.09
CTNND1-205ENST00000399050 MTNR1AP48039 350 aa8.27□□□□□ -1.09
CTNND1-205ENST00000399050 PITPNBP48739 271 aa8.27□□□□□ -1.09
CTNND1-205ENST00000399050 KRBOX4Q5JUW0 171 aa8.27□□□□□ -1.09
CTNND1-205ENST00000399050 AGAP6Q5VW22 663 aa8.27□□□□□ -1.09
CTNND1-205ENST00000399050 SLC22A10Q63ZE4 541 aa8.27□□□□□ -1.09
CTNND1-205ENST00000399050 DNM1P34Q6PK57 102 aa8.27□□□□□ -1.09
CTNND1-205ENST00000399050 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.27□□□□□ -1.09
CTNND1-205ENST00000399050 MFSD8Q8NHS3 518 aa8.27□□□□□ -1.09
CTNND1-205ENST00000399050 SH3RF2Q8TEC5 729 aa8.27□□□□□ -1.09
CTNND1-205ENST00000399050 THAP4Q8WY91 577 aa8.27□□□□□ -1.09
CTNND1-205ENST00000399050 AGAP4Q96P64 663 aa8.27□□□□□ -1.09
CTNND1-205ENST00000399050 C20orf27Q9GZN8 174 aa8.27□□□□□ -1.09
CTNND1-205ENST00000399050 OR2S2Q9NQN1 319 aa8.27□□□□□ -1.09
CTNND1-205ENST00000399050 GPR52Q9Y2T5 361 aa8.27□□□□□ -1.09
CTNND1-205ENST00000399050 JRKO75564 520 aa8.27□□□□□ -1.09
CTNND1-205ENST00000399050 TFP02787 698 aa8.27□□□□□ -1.09
CTNND1-205ENST00000399050 RAB3BP20337 219 aa8.27□□□□□ -1.09
CTNND1-205ENST00000399050 HNF1BP35680 557 aa8.27□□□□□ -1.09
CTNND1-205ENST00000399050 CDKN1CP49918 316 aaPredicted RBP8.27□□□□□ -1.09
CTNND1-205ENST00000399050 HTR6P50406 440 aa8.27□□□□□ -1.09
CTNND1-205ENST00000399050 SF3A2Q15428 464 aaKnown RBP8.27□□□□□ -1.09
CTNND1-205ENST00000399050 FAM214AQ32MH5 1076 aa8.27□□□□□ -1.09
CTNND1-205ENST00000399050 BCL7AQ4VC05 210 aa8.27□□□□□ -1.09
CTNND1-205ENST00000399050 GLT8D1Q68CQ7 371 aa8.27□□□□□ -1.09
CTNND1-205ENST00000399050 CCDC116Q8IYX3 515 aa8.27□□□□□ -1.09
CTNND1-205ENST00000399050 B3GNT7Q8NFL0 401 aa8.27□□□□□ -1.09
CTNND1-205ENST00000399050 OR6N2Q8NGY6 317 aa8.27□□□□□ -1.09
CTNND1-205ENST00000399050 JSRP1Q96MG2 331 aaPredicted RBP8.27□□□□□ -1.09
CTNND1-205ENST00000399050 NPIPA5E9PKD4 350 aa8.27□□□□□ -1.09
CTNND1-205ENST00000399050 AQP9O43315 295 aa8.27□□□□□ -1.09
CTNND1-205ENST00000399050 SSX5O60225 188 aa8.27□□□□□ -1.09
CTNND1-205ENST00000399050 CDK1P06493 297 aa8.27□□□□□ -1.09
CTNND1-205ENST00000399050 FGF4P08620 206 aa8.27□□□□□ -1.09
CTNND1-205ENST00000399050 PRSS56P0CW18 603 aa8.27□□□□□ -1.09
CTNND1-205ENST00000399050 OSMP13725 252 aa8.27□□□□□ -1.09
CTNND1-205ENST00000399050 GPR4P46093 362 aa8.27□□□□□ -1.09
CTNND1-205ENST00000399050 INHBEP58166 350 aa8.27□□□□□ -1.09
CTNND1-205ENST00000399050 RAB8AP61006 207 aa8.27□□□□□ -1.09
CTNND1-205ENST00000399050 EIF4HQ15056 248 aaKnown RBP8.27□□□□□ -1.09
CTNND1-205ENST00000399050 CDNFQ49AH0 187 aa8.27□□□□□ -1.09
CTNND1-205ENST00000399050 CES4AQ5XG92 561 aa8.27□□□□□ -1.09
CTNND1-205ENST00000399050 TMPRSS12Q86WS5 348 aa8.27□□□□□ -1.09
CTNND1-205ENST00000399050 TMEM130Q8N3G9 435 aa8.27□□□□□ -1.09
CTNND1-205ENST00000399050 SYT14Q8NB59 555 aa8.27□□□□□ -1.09
CTNND1-205ENST00000399050 ARNTL2Q8WYA1 636 aa8.27□□□□□ -1.09
CTNND1-205ENST00000399050 FAM46AQ96IP4 442 aaKnown RBP8.27□□□□□ -1.09
CTNND1-205ENST00000399050 C17orf62Q9BQA9 187 aa8.27□□□□□ -1.09
CTNND1-205ENST00000399050 RBCK1Q9BYM8 510 aa8.27□□□□□ -1.09
CTNND1-205ENST00000399050 WDR26Q9H7D7 661 aa8.27□□□□□ -1.09
CTNND1-205ENST00000399050 NMNAT1Q9HAN9 279 aaPredicted RBP8.27□□□□□ -1.09
CTNND1-205ENST00000399050 DCAF13Q9NV06 445 aaKnown RBP8.27□□□□□ -1.09
CTNND1-205ENST00000399050 NPIPA1Q9UND3 350 aa8.27□□□□□ -1.09
CTNND1-205ENST00000399050 A8MUA0 341 aa8.26□□□□□ -1.09
CTNND1-205ENST00000399050 CHRNB1P11230 501 aa8.26□□□□□ -1.09
CTNND1-205ENST00000399050 CDKN2CP42773 168 aa8.26□□□□□ -1.09
CTNND1-205ENST00000399050 FLT3LGP49771 235 aa8.26□□□□□ -1.09
CTNND1-205ENST00000399050 ILF3Q12906 894 aaKnown RBP eCLIP8.26□□□□□ -1.092e-7■■□□□ 13.8
CTNND1-205ENST00000399050 TBC1D25Q3MII6 688 aa8.26□□□□□ -1.09
CTNND1-205ENST00000399050 ELP2Q6IA86 826 aa8.26□□□□□ -1.09
CTNND1-205ENST00000399050 LETMD1Q6P1Q0 360 aa8.26□□□□□ -1.09
CTNND1-205ENST00000399050 CHCHD4Q8N4Q1 142 aa8.26□□□□□ -1.09
CTNND1-205ENST00000399050 TFGQ92734 400 aaPredicted RBP8.26□□□□□ -1.09
CTNND1-205ENST00000399050 CPNE2Q96FN4 548 aaPredicted RBP8.26□□□□□ -1.09
CTNND1-205ENST00000399050 TMEM41AQ96HV5 264 aa8.26□□□□□ -1.09
CTNND1-205ENST00000399050 ZNF649Q9BS31 505 aa8.26□□□□□ -1.09
CTNND1-205ENST00000399050 TBL1XR1Q9BZK7 514 aa8.26□□□□□ -1.09
CTNND1-205ENST00000399050 DPEP2Q9H4A9 486 aa8.26□□□□□ -1.09
CTNND1-205ENST00000399050 TMEM98Q9Y2Y6 226 aa8.26□□□□□ -1.09
CTNND1-205ENST00000399050 UBFD1O14562 309 aaKnown RBP8.26□□□□□ -1.09
CTNND1-205ENST00000399050 KHNYNO15037 678 aaKnown RBP8.26□□□□□ -1.09
CTNND1-205ENST00000399050 PTPN2P17706 415 aa8.26□□□□□ -1.09
CTNND1-205ENST00000399050 PYCR1P32322 319 aa8.26□□□□□ -1.09
CTNND1-205ENST00000399050 GCGRP47871 477 aa8.26□□□□□ -1.09
CTNND1-205ENST00000399050 MASP1P48740 699 aa8.26□□□□□ -1.09
CTNND1-205ENST00000399050 ERVK-21P61565 698 aa8.26□□□□□ -1.09
CTNND1-205ENST00000399050 FAM189BP81408 668 aa8.26□□□□□ -1.09
CTNND1-205ENST00000399050 GPR19Q15760 415 aa8.26□□□□□ -1.09
CTNND1-205ENST00000399050 FAM189A2Q15884 450 aa8.26□□□□□ -1.09
CTNND1-205ENST00000399050 FAM109AQ8N4B1 249 aa8.26□□□□□ -1.09
CTNND1-205ENST00000399050 CCDC54Q8NEL0 328 aa8.26□□□□□ -1.09
CTNND1-205ENST00000399050 OR7G1Q8NGA0 311 aa8.26□□□□□ -1.09
CTNND1-205ENST00000399050 IGSF8Q969P0 613 aa8.26□□□□□ -1.09
CTNND1-205ENST00000399050 SLC22A18Q96BI1 424 aa8.26□□□□□ -1.09
CTNND1-205ENST00000399050 PCYT2Q99447 389 aa8.26□□□□□ -1.09
CTNND1-205ENST00000399050 STRA6Q9BX79 667 aa8.26□□□□□ -1.09
CTNND1-205ENST00000399050 SYT4Q9H2B2 425 aa8.26□□□□□ -1.09
CTNND1-205ENST00000399050 RANGRFQ9HD47 186 aaPredicted RBP8.26□□□□□ -1.09
CTNND1-205ENST00000399050 ASB4Q9Y574 426 aa8.26□□□□□ -1.09
CTNND1-205ENST00000399050 MED1Q15648 1581 aaPredicted RBP8.26□□□□□ -1.09
CTNND1-205ENST00000399050 CICQ96RK0 1608 aaPredicted RBP8.26□□□□□ -1.09
CTNND1-205ENST00000399050 A0A1W2PRU2 124 aa8.26□□□□□ -1.09
CTNND1-205ENST00000399050 ANHXE9PGG2 379 aa8.26□□□□□ -1.09
CTNND1-205ENST00000399050 M0R129 80 aa8.26□□□□□ -1.09
CTNND1-205ENST00000399050 SPDEFO95238 335 aa8.26□□□□□ -1.09
CTNND1-205ENST00000399050 HAPLN1P10915 354 aaPredicted RBP8.26□□□□□ -1.09
CTNND1-205ENST00000399050 HSD3B1P14060 373 aa8.26□□□□□ -1.09
CTNND1-205ENST00000399050 ELNP15502 786 aa8.26□□□□□ -1.09
CTNND1-205ENST00000399050 GGT2P36268 569 aa8.26□□□□□ -1.09
CTNND1-205ENST00000399050 TLE2Q04725 743 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms