RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 SEC13P55735 322 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 YBEYP58557 167 aaPredicted RBP9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 RPA4Q13156 261 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 FGFBP1Q14512 234 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 ZNF273Q14593 569 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 FCN2Q15485 313 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 VMACQ2NL98 169 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 C18orf21Q32NC0 220 aaPredicted RBP9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 LEXMQ3ZCV2 418 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 ERICH5Q6P6B1 374 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 RFLNAQ6ZTI6 216 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 CHST9Q7L1S5 443 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 BMP8AQ7Z5Y6 402 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 SERPINA11Q86U17 422 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 TAGAPQ8N103 731 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 Q8N402 240 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 CELF5Q8N6W0 485 aaKnown RBP9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 CLDN22Q8N7P3 220 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 OR7G3Q8NG95 312 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 TPD52L3Q96J77 140 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 CD244Q9BZW8 370 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 ELOVL6Q9H5J4 265 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 IFT46Q9NQC8 304 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 TMEM184CQ9NVA4 438 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 SH3BP4Q9P0V3 963 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 GMEB2Q9UKD1 530 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 MAFFQ9ULX9 164 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 POFUT2Q9Y2G5 429 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 ZNF175Q9Y473 711 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 OR5K4A6NMS3 321 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 TNFRSF11BO00300 401 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 WWP2O00308 870 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 CHP2O43745 196 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 CCNB2O95067 398 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 B3GALT4O96024 378 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 ADH5P11766 374 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 LAMP2P13473 410 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 ZP3P21754 424 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 LHCGRP22888 699 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 HTR7P34969 479 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 RAB14P61106 215 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 HMGCS1Q01581 520 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 GTF2H2Q13888 395 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 SF3A2Q15428 464 aaKnown RBP9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 ZNF284Q2VY69 593 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 KLHL22Q53GT1 634 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 ZNF628Q5EBL2 1059 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 GTF2H2CQ6P1K8 395 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 LRRC17Q8N6Y2 441 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 TMEM145Q8NBT3 493 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 OR10G2Q8NGC3 310 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 C7orf34Q96L11 122 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 ZDHHC6Q9H6R6 413 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 ANKRA2Q9H9E1 313 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 FOLH1BQ9HBA9 442 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 FARSBQ9NSD9 589 aaKnown RBP9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 RDH8Q9NYR8 311 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 LHX3Q9UBR4 397 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 TMCC3Q9ULS5 477 aa9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 LSM2Q9Y333 95 aaKnown RBP9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 TCF20Q9UGU0 1960 aaKnown RBP9.64□□□□□ -0.87
HMGCLL1-205ENST00000398661 SH3D21A4FU49 640 aa9.63□□□□□ -0.87
HMGCLL1-205ENST00000398661 SLC28A1O00337 649 aa9.63□□□□□ -0.87
HMGCLL1-205ENST00000398661 KHNYNO15037 678 aaKnown RBP9.63□□□□□ -0.87
HMGCLL1-205ENST00000398661 CSO75390 466 aaKnown RBP9.63□□□□□ -0.87
HMGCLL1-205ENST00000398661 C1QCP02747 245 aa9.63□□□□□ -0.87
HMGCLL1-205ENST00000398661 ATXN1LP0C7T5 689 aaKnown RBP9.63□□□□□ -0.87
HMGCLL1-205ENST00000398661 SRCP12931 536 aa9.63□□□□□ -0.87
HMGCLL1-205ENST00000398661 HOXB1P14653 301 aaPredicted RBP9.63□□□□□ -0.87
HMGCLL1-205ENST00000398661 PIK3CGP48736 1102 aa9.63□□□□□ -0.87
HMGCLL1-205ENST00000398661 MLLT1Q03111 559 aaPredicted RBP9.63□□□□□ -0.87
HMGCLL1-205ENST00000398661 GAB4Q2WGN9 574 aa9.63□□□□□ -0.87
HMGCLL1-205ENST00000398661 USP39Q53GS9 565 aaKnown RBP9.63□□□□□ -0.87
HMGCLL1-205ENST00000398661 TEX26Q8N6G2 289 aa9.63□□□□□ -0.87
HMGCLL1-205ENST00000398661 FIBINQ8TAL6 211 aa9.63□□□□□ -0.87
HMGCLL1-205ENST00000398661 UFD1Q92890 307 aa9.63□□□□□ -0.87
HMGCLL1-205ENST00000398661 VOPP1Q96AW1 172 aa9.63□□□□□ -0.87
HMGCLL1-205ENST00000398661 EID2BQ96D98 161 aa9.63□□□□□ -0.87
HMGCLL1-205ENST00000398661 LINGO1Q96FE5 620 aa9.63□□□□□ -0.87
HMGCLL1-205ENST00000398661 FERD3LQ96RJ6 166 aa9.63□□□□□ -0.87
HMGCLL1-205ENST00000398661 MED28Q9H204 178 aa9.63□□□□□ -0.87
HMGCLL1-205ENST00000398661 CLEC4MQ9H2X3 399 aaPredicted RBP9.63□□□□□ -0.87
HMGCLL1-205ENST00000398661 LRTM1Q9HBL6 345 aa9.63□□□□□ -0.87
HMGCLL1-205ENST00000398661 RLIMQ9NVW2 624 aa9.63□□□□□ -0.87
HMGCLL1-205ENST00000398661 CLN6Q9NWW5 311 aa9.63□□□□□ -0.87
HMGCLL1-205ENST00000398661 NDUFB11Q9NX14 153 aa9.63□□□□□ -0.87
HMGCLL1-205ENST00000398661 NCKAP1Q9Y2A7 1128 aa9.63□□□□□ -0.87
HMGCLL1-205ENST00000398661 RAI2Q9Y5P3 530 aa9.63□□□□□ -0.87
HMGCLL1-205ENST00000398661 CDH10Q9Y6N8 788 aa9.63□□□□□ -0.87
HMGCLL1-205ENST00000398661 ARPC4-TTLL3A0A0A6YYG9 625 aa9.63□□□□□ -0.87
HMGCLL1-205ENST00000398661 QSOX1O00391 747 aa9.63□□□□□ -0.87
HMGCLL1-205ENST00000398661 FFAR3O14843 346 aa9.63□□□□□ -0.87
HMGCLL1-205ENST00000398661 GPR42O15529 346 aa9.63□□□□□ -0.87
HMGCLL1-205ENST00000398661 KCNK5O95279 499 aa9.63□□□□□ -0.87
HMGCLL1-205ENST00000398661 OTCP00480 354 aa9.63□□□□□ -0.87
HMGCLL1-205ENST00000398661 ANXA8P13928 327 aa9.63□□□□□ -0.87
HMGCLL1-205ENST00000398661 GNA13Q14344 377 aa9.63□□□□□ -0.87
HMGCLL1-205ENST00000398661 PCBP2Q15366 365 aaKnown RBP eCLIP9.63□□□□□ -0.87
HMGCLL1-205ENST00000398661 SPHARQ15513 63 aa9.63□□□□□ -0.87
HMGCLL1-205ENST00000398661 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms