RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 PLD6Q8N2A8 252 aaKnown RBP13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 ACOT12Q8WYK0 555 aa13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 FBXL20Q96IG2 436 aa13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 BCAT2O15382 392 aaPredicted RBP13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 IL3P08700 152 aa13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 GRPRP30550 384 aa13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 UBE2NP61088 152 aaKnown RBP13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 MEP1AQ16819 746 aa13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 ZNF630Q2M218 657 aaPredicted RBP13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 TMEFF1Q8IYR6 380 aa13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 ELSPBP1Q96BH3 223 aa13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 G6PC3Q9BUM1 346 aa13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 SLC22A4Q9H015 551 aa13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 MTG2Q9H4K7 406 aa13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 OBP2AQ9NY56 170 aa13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 ACAD8Q9UKU7 415 aa13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 NOP16Q9Y3C1 178 aaKnown RBP13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 PRSS51A0A1B0GVH4 220 aa13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 PROM1O43490 865 aa13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 CD9P21926 228 aa13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 ADH7P40394 386 aa13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 KIAA0895LQ68EN5 471 aa13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 EPGNQ6UW88 154 aa13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 TRIM73Q86UV7 250 aa13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 ERI1Q8IV48 349 aaKnown RBP13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 NUP43Q8NFH3 380 aa13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 BEX2Q9BXY8 128 aa13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 BEX1Q9HBH7 125 aa13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 ZNF487B1APH4 448 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 APOL3O95236 402 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 PCLAFQ15004 111 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 HNRNPA1L2Q32P51 320 aaKnown RBP13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 SCD5Q86SK9 330 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 TMEM80Q96HE8 168 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 NSUN5Q96P11 429 aaKnown RBP13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 RMI1Q9H9A7 625 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 ABCD2Q9UBJ2 740 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 PCDHGA10Q9Y5H3 936 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 LRP5O75197 1615 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 TEX13CA0A0J9YWL9 993 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 A0A1W2PPK0 400 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 EPOP01588 193 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 GLP1RP43220 463 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 CLDN2P57739 230 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 CD83Q01151 205 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 GRIK2Q13002 908 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 LRIT3Q3SXY7 679 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 HSF5Q4G112 596 aaPredicted RBP13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 GALNT12Q8IXK2 581 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 DTX3Q8N9I9 347 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 CHST14Q8NCH0 376 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 CASTOR1Q8WTX7 329 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 EDAQ92838 391 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 FCRL3Q96P31 734 aaPredicted RBP13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 MAPKAP1Q9BPZ7 522 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 DCSTAMPQ9H295 470 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 ZNF226Q9NYT6 803 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 PSAT1Q9Y617 370 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 UQCRC2P22695 453 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 RTN4RL1Q86UN2 441 aaPredicted RBP13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 OR51G2Q8NGK0 314 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 SCGB3A2Q96PL1 93 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 WACQ9BTA9 647 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 PVALBP20472 110 aaPredicted RBP13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 KCNC1P48547 511 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 TBPL1P62380 186 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 BTBD16Q32M84 506 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 REEP3Q6NUK4 255 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 ALKAL1Q6UXT8 129 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 VASH1Q7L8A9 365 aaPredicted RBP13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 OSTF1Q92882 214 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 ZBTB26Q9HCK0 441 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 PREBQ9HCU5 417 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 NUP50Q9UKX7 468 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 SOBPA7XYQ1 873 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 TSPAN4O14817 238 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 BCKDHAP12694 445 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 HOXC13P31276 330 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 DEFA5Q01523 94 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 EMX2Q04743 252 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 BNIP3Q12983 259 aa13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 C9orf43Q8TAL5 461 aaPredicted RBP13.61□□□□□ -0.23
PCDHA11-201ENST00000398640 A0A1W2PP18 115 aa13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 TPTEP56180 551 aa13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 FXYD6P3P58550 94 aa13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 DLX2Q07687 328 aaPredicted RBP13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 CDK10Q15131 360 aa13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 CPNE2Q96FN4 548 aaPredicted RBP13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 ZNF285Q96NJ3 590 aa13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 MRM3Q9HC36 420 aaKnown RBP13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 KCNJ13O60928 360 aa13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 ITGB7P26010 798 aa13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 ADAM15Q13444 863 aa13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 KCNC3Q14003 757 aa13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 EXOC3L2Q2M3D2 409 aa13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 POGLUT1Q8NBL1 392 aa13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 AURKBQ96GD4 344 aaPredicted RBP13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 FN3KQ9H479 309 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms