RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 DUSP26Q9BV47 211 aa18.26■□□□□ 0.51
PDLIM2-204ENST00000397760 RMND5AQ9H871 391 aa18.26■□□□□ 0.51
PDLIM2-204ENST00000397760 TEX10Q9NXF1 929 aaPredicted RBP18.26■□□□□ 0.51
PDLIM2-204ENST00000397760 MAN2B2Q9Y2E5 1009 aa18.26■□□□□ 0.51
PDLIM2-204ENST00000397760 TRBV5-3A0A0A0MS03 114 aa18.26■□□□□ 0.51
PDLIM2-204ENST00000397760 TOX3O15405 576 aaPredicted RBP18.26■□□□□ 0.51
PDLIM2-204ENST00000397760 SEC24DO94855 1032 aaPredicted RBP18.26■□□□□ 0.51
PDLIM2-204ENST00000397760 DDCP20711 480 aa18.26■□□□□ 0.51
PDLIM2-204ENST00000397760 ZNF10P21506 573 aaPredicted RBP18.26■□□□□ 0.51
PDLIM2-204ENST00000397760 EMP3P54852 163 aa18.26■□□□□ 0.51
PDLIM2-204ENST00000397760 SLC14A1Q13336 389 aa18.26■□□□□ 0.51
PDLIM2-204ENST00000397760 COL9A2Q14055 689 aaPredicted RBP18.26■□□□□ 0.51
PDLIM2-204ENST00000397760 MSANTD1Q6ZTZ1 278 aa18.26■□□□□ 0.51
PDLIM2-204ENST00000397760 D2HGDHQ8N465 521 aa18.26■□□□□ 0.51
PDLIM2-204ENST00000397760 OR4D9Q8NGE8 314 aa18.26■□□□□ 0.51
PDLIM2-204ENST00000397760 ZNF285Q96NJ3 590 aa18.26■□□□□ 0.51
PDLIM2-204ENST00000397760 SERINC2Q96SA4 455 aa18.26■□□□□ 0.51
PDLIM2-204ENST00000397760 EDEM2Q9BV94 578 aa18.26■□□□□ 0.51
PDLIM2-204ENST00000397760 ZNF768Q9H5H4 540 aaKnown RBP18.26■□□□□ 0.51
PDLIM2-204ENST00000397760 MIEF1Q9NQG6 463 aa18.26■□□□□ 0.51
PDLIM2-204ENST00000397760 RXFP3Q9NSD7 469 aa18.26■□□□□ 0.51
PDLIM2-204ENST00000397760 SEMA4GQ9NTN9 838 aa18.26■□□□□ 0.51
PDLIM2-204ENST00000397760 ATAD3AQ9NVI7 634 aa18.26■□□□□ 0.51
PDLIM2-204ENST00000397760 FBXW2Q9UKT8 454 aa18.26■□□□□ 0.51
PDLIM2-204ENST00000397760 ASB4Q9Y574 426 aa18.26■□□□□ 0.51
PDLIM2-204ENST00000397760 SLC22A7Q9Y694 548 aa18.26■□□□□ 0.51
PDLIM2-204ENST00000397760 FRYLO94915 3013 aa18.25■□□□□ 0.51
PDLIM2-204ENST00000397760 FAM220BPB1ANY3 271 aa18.25■□□□□ 0.51
PDLIM2-204ENST00000397760 GUCY1B2O75343 617 aa18.25■□□□□ 0.51
PDLIM2-204ENST00000397760 ALDH9A1P49189 494 aa18.25■□□□□ 0.51
PDLIM2-204ENST00000397760 WNT3P56703 355 aa18.25■□□□□ 0.51
PDLIM2-204ENST00000397760 ZNF385BQ569K4 471 aa18.25■□□□□ 0.51
PDLIM2-204ENST00000397760 LRIF1Q5T3J3 769 aa18.25■□□□□ 0.51
PDLIM2-204ENST00000397760 TBPL2Q6SJ96 375 aa18.25■□□□□ 0.51
PDLIM2-204ENST00000397760 ANKRD46Q86W74 232 aa18.25■□□□□ 0.51
PDLIM2-204ENST00000397760 DPYSL5Q9BPU6 564 aa18.25■□□□□ 0.51
PDLIM2-204ENST00000397760 PLGRKTQ9HBL7 147 aa18.25■□□□□ 0.51
PDLIM2-204ENST00000397760 IRAK4Q9NWZ3 460 aa18.25■□□□□ 0.51
PDLIM2-204ENST00000397760 LYARQ9NX58 379 aaKnown RBP18.25■□□□□ 0.51
PDLIM2-204ENST00000397760 IFT80Q9P2H3 777 aaPredicted RBP18.25■□□□□ 0.51
PDLIM2-204ENST00000397760 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.25■□□□□ 0.51
PDLIM2-204ENST00000397760 ATG4BQ9Y4P1 393 aa18.25■□□□□ 0.51
PDLIM2-204ENST00000397760 G3V2T6 193 aa18.24■□□□□ 0.51
PDLIM2-204ENST00000397760 CD59P13987 128 aa18.24■□□□□ 0.51
PDLIM2-204ENST00000397760 PMS2P3Q13401 168 aa18.24■□□□□ 0.51
PDLIM2-204ENST00000397760 RAB39AQ14964 217 aa18.24■□□□□ 0.51
PDLIM2-204ENST00000397760 TCTE1Q5JU00 501 aa18.24■□□□□ 0.51
PDLIM2-204ENST00000397760 NDUFAF5Q5TEU4 345 aa18.24■□□□□ 0.51
PDLIM2-204ENST00000397760 KCTD8Q6ZWB6 473 aa18.24■□□□□ 0.51
PDLIM2-204ENST00000397760 PRSS41Q7RTY9 318 aa18.24■□□□□ 0.51
PDLIM2-204ENST00000397760 THAP5Q7Z6K1 395 aa18.24■□□□□ 0.51
PDLIM2-204ENST00000397760 MICU2Q8IYU8 434 aa18.24■□□□□ 0.51
PDLIM2-204ENST00000397760 OFCC1Q8IZS5 231 aa18.24■□□□□ 0.51
PDLIM2-204ENST00000397760 CLEC4FQ8N1N0 589 aa18.24■□□□□ 0.51
PDLIM2-204ENST00000397760 ARHGEF39Q8N4T4 335 aa18.24■□□□□ 0.51
PDLIM2-204ENST00000397760 HDAC2Q92769 488 aaKnown RBP18.24■□□□□ 0.51
PDLIM2-204ENST00000397760 PPP1R14BQ96C90 147 aa18.24■□□□□ 0.51
PDLIM2-204ENST00000397760 ITCHQ96J02 903 aa18.24■□□□□ 0.51
PDLIM2-204ENST00000397760 GFM1Q96RP9 751 aaKnown RBP18.24■□□□□ 0.51
PDLIM2-204ENST00000397760 RBM4BQ9BQ04 359 aaKnown RBP18.24■□□□□ 0.51
PDLIM2-204ENST00000397760 THUMPD3Q9BV44 507 aaKnown RBP18.24■□□□□ 0.51
PDLIM2-204ENST00000397760 RBM4Q9BWF3 364 aaKnown RBP18.24■□□□□ 0.51
PDLIM2-204ENST00000397760 FAIM2Q9BWQ8 316 aa18.24■□□□□ 0.51
PDLIM2-204ENST00000397760 BHLHE41Q9C0J9 482 aaPredicted RBP18.24■□□□□ 0.51
PDLIM2-204ENST00000397760 PIF1Q9H611 641 aa18.24■□□□□ 0.51
PDLIM2-204ENST00000397760 POLR1BQ9H9Y6 1135 aa18.24■□□□□ 0.51
PDLIM2-204ENST00000397760 TMEM9BQ9NQ34 198 aa18.24■□□□□ 0.51
PDLIM2-204ENST00000397760 FAM120CQ9NX05 1096 aaKnown RBP18.24■□□□□ 0.51
PDLIM2-204ENST00000397760 FTSJ1Q9UET6 329 aa18.24■□□□□ 0.51
PDLIM2-204ENST00000397760 ASXL3Q9C0F0 2248 aa18.24■□□□□ 0.51
PDLIM2-204ENST00000397760 A0A096LPI6 279 aa18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 B3GALT2O43825 422 aa18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 SCN2BO60939 215 aa18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 DRD2P14416 443 aa18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 TMBIM6P55061 237 aa18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 GPR19Q15760 415 aa18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 ANXA8L1Q5VT79 327 aa18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 BROXQ5VW32 411 aa18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 CALHM3Q86XJ0 350 aa18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 VPS37AQ8NEZ2 397 aa18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 OR10A6Q8NH74 314 aa18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 NRBF2Q96F24 287 aa18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 MAGED4Q96JG8 741 aa18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 MAPKAP1Q9BPZ7 522 aa18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 OSBPL10Q9BXB5 764 aa18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 SPRTNQ9H040 489 aaPredicted RBP18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 SERHLQ9NQF3 203 aa18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 DCAF13Q9NV06 445 aaKnown RBP18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 FAM86C1Q9NVL1 165 aa18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 NCDNQ9UBB6 729 aa18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 NAALAD2Q9Y3Q0 740 aa18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 CACNA1HO95180 2353 aa18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 RP1P56715 2156 aa18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 IGHV5-10-1A0A0J9YXX1 117 aa18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 A0A1W2PR48 441 aa18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 TMEM150CB9EJG8 249 aa18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 CXCR6O00574 342 aa18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 GALR3O60755 368 aaPredicted RBP18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 DNAJB5O75953 348 aa18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 CLIC3O95833 236 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms