RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 C9orf40Q8IXQ3 194 aa8.6□□□□□ -1.03
NEDD9-203ENST00000397378 KRT78Q8N1N4 520 aa8.6□□□□□ -1.03
NEDD9-203ENST00000397378 FAM13CQ8NE31 585 aa8.6□□□□□ -1.03
NEDD9-203ENST00000397378 OR10G3Q8NGC4 313 aa8.6□□□□□ -1.03
NEDD9-203ENST00000397378 CCT6BQ92526 530 aa8.6□□□□□ -1.03
NEDD9-203ENST00000397378 ANKRD7Q92527 254 aa8.6□□□□□ -1.03
NEDD9-203ENST00000397378 ANKRD9Q96BM1 317 aaPredicted RBP8.6□□□□□ -1.03
NEDD9-203ENST00000397378 SENP5Q96HI0 755 aaPredicted RBP8.6□□□□□ -1.03
NEDD9-203ENST00000397378 ART5Q96L15 291 aa8.6□□□□□ -1.03
NEDD9-203ENST00000397378 ZNF597Q96LX8 424 aa8.6□□□□□ -1.03
NEDD9-203ENST00000397378 RUNDC3BQ96NL0 473 aa8.6□□□□□ -1.03
NEDD9-203ENST00000397378 TRIB1Q96RU8 372 aa8.6□□□□□ -1.03
NEDD9-203ENST00000397378 KCNK17Q96T54 332 aa8.6□□□□□ -1.03
NEDD9-203ENST00000397378 PIGQQ9BRB3 760 aa8.6□□□□□ -1.03
NEDD9-203ENST00000397378 DOHHQ9BU89 302 aa8.6□□□□□ -1.03
NEDD9-203ENST00000397378 UBQLN3Q9H347 655 aa8.6□□□□□ -1.03
NEDD9-203ENST00000397378 COPS7BQ9H9Q2 264 aaPredicted RBP8.6□□□□□ -1.03
NEDD9-203ENST00000397378 PRDM7Q9NQW5 492 aa8.6□□□□□ -1.03
NEDD9-203ENST00000397378 ZNF701Q9NV72 531 aaPredicted RBP8.6□□□□□ -1.03
NEDD9-203ENST00000397378 LPAR3Q9UBY5 353 aa8.6□□□□□ -1.03
NEDD9-203ENST00000397378 DYSFO75923 2080 aa8.59□□□□□ -1.03
NEDD9-203ENST00000397378 FGGP02679 453 aa8.59□□□□□ -1.03
NEDD9-203ENST00000397378 HPNP05981 417 aa8.59□□□□□ -1.03
NEDD9-203ENST00000397378 TMIGD3P0DMS9 266 aaPredicted RBP8.59□□□□□ -1.03
NEDD9-203ENST00000397378 COX7A2P14406 83 aa8.59□□□□□ -1.03
NEDD9-203ENST00000397378 PAX1P15863 534 aa8.59□□□□□ -1.03
NEDD9-203ENST00000397378 PTMSP20962 102 aa8.59□□□□□ -1.03
NEDD9-203ENST00000397378 THBS2P35442 1172 aa8.59□□□□□ -1.03
NEDD9-203ENST00000397378 STT3AP46977 705 aa8.59□□□□□ -1.03
NEDD9-203ENST00000397378 HNMTP50135 292 aa8.59□□□□□ -1.03
NEDD9-203ENST00000397378 CDK9P50750 372 aaKnown RBP8.59□□□□□ -1.03
NEDD9-203ENST00000397378 OCRLQ01968 901 aa8.59□□□□□ -1.03
NEDD9-203ENST00000397378 TGM3Q08188 693 aa8.59□□□□□ -1.03
NEDD9-203ENST00000397378 BIKQ13323 160 aa8.59□□□□□ -1.03
NEDD9-203ENST00000397378 SLBPQ14493 270 aaKnown RBP eCLIP8.59□□□□□ -1.03
NEDD9-203ENST00000397378 CRYMQ14894 314 aa8.59□□□□□ -1.03
NEDD9-203ENST00000397378 KCTD19Q17RG1 926 aaPredicted RBP8.59□□□□□ -1.03
NEDD9-203ENST00000397378 VN1R5Q7Z5H4 357 aa8.59□□□□□ -1.03
NEDD9-203ENST00000397378 ZNF441Q8N8Z8 693 aa8.59□□□□□ -1.03
NEDD9-203ENST00000397378 ZPLD1Q8TCW7 415 aa8.59□□□□□ -1.03
NEDD9-203ENST00000397378 WDYHV1Q96HA8 205 aa8.59□□□□□ -1.03
NEDD9-203ENST00000397378 FBXL20Q96IG2 436 aa8.59□□□□□ -1.03
NEDD9-203ENST00000397378 JSRP1Q96MG2 331 aaPredicted RBP8.59□□□□□ -1.03
NEDD9-203ENST00000397378 ZFP3Q96NJ6 502 aa8.59□□□□□ -1.03
NEDD9-203ENST00000397378 HS3ST6Q96QI5 342 aa8.59□□□□□ -1.03
NEDD9-203ENST00000397378 BAG1Q99933 345 aaPredicted RBP8.59□□□□□ -1.03
NEDD9-203ENST00000397378 DESI2Q9BSY9 194 aa8.59□□□□□ -1.03
NEDD9-203ENST00000397378 SFXN3Q9BWM7 321 aa8.59□□□□□ -1.03
NEDD9-203ENST00000397378 ROGDIQ9GZN7 287 aa8.59□□□□□ -1.03
NEDD9-203ENST00000397378 ADAM19Q9H013 955 aa8.59□□□□□ -1.03
NEDD9-203ENST00000397378 SHARPINQ9H0F6 387 aa8.59□□□□□ -1.03
NEDD9-203ENST00000397378 EHD1Q9H4M9 534 aa8.59□□□□□ -1.03
NEDD9-203ENST00000397378 KLHL28Q9NXS3 571 aa8.59□□□□□ -1.03
NEDD9-203ENST00000397378 IKZF3Q9UKT9 509 aa8.59□□□□□ -1.03
NEDD9-203ENST00000397378 CORO1CQ9ULV4 474 aaPredicted RBP8.59□□□□□ -1.03
NEDD9-203ENST00000397378 CAMK2AQ9UQM7 478 aa8.59□□□□□ -1.03
NEDD9-203ENST00000397378 VWA7Q9Y334 891 aa8.59□□□□□ -1.03
NEDD9-203ENST00000397378 GOLGA8MH3BSY2 632 aa8.58□□□□□ -1.04
NEDD9-203ENST00000397378 DYRK3O43781 588 aa8.58□□□□□ -1.04
NEDD9-203ENST00000397378 WDR47O94967 919 aa8.58□□□□□ -1.04
NEDD9-203ENST00000397378 SNX4O95219 450 aa8.58□□□□□ -1.04
NEDD9-203ENST00000397378 ACSL3O95573 720 aa8.58□□□□□ -1.04
NEDD9-203ENST00000397378 TTC4O95801 387 aa8.58□□□□□ -1.04
NEDD9-203ENST00000397378 KRT14P02533 472 aa8.58□□□□□ -1.04
NEDD9-203ENST00000397378 PGAM1P18669 254 aa8.58□□□□□ -1.04
NEDD9-203ENST00000397378 MC3RP41968 323 aa8.58□□□□□ -1.04
NEDD9-203ENST00000397378 RPL21P46778 160 aaKnown RBP8.58□□□□□ -1.04
NEDD9-203ENST00000397378 SLC6A12P48065 614 aa8.58□□□□□ -1.04
NEDD9-203ENST00000397378 KCNC1P48547 511 aa8.58□□□□□ -1.04
NEDD9-203ENST00000397378 PCYT1AP49585 367 aa8.58□□□□□ -1.04
NEDD9-203ENST00000397378 RCAN2Q14206 197 aa8.58□□□□□ -1.04
NEDD9-203ENST00000397378 LIPNQ5VXI9 398 aa8.58□□□□□ -1.04
NEDD9-203ENST00000397378 FAM45BPQ6NSW5 357 aa8.58□□□□□ -1.04
NEDD9-203ENST00000397378 C9orf106Q8NAJ2 232 aa8.58□□□□□ -1.04
NEDD9-203ENST00000397378 BBOF1Q8ND07 529 aa8.58□□□□□ -1.04
NEDD9-203ENST00000397378 SRFBP1Q8NEF9 429 aaKnown RBP8.58□□□□□ -1.04
NEDD9-203ENST00000397378 FAM45AQ8TCE6 357 aa8.58□□□□□ -1.04
NEDD9-203ENST00000397378 DGAT2Q96PD7 388 aa8.58□□□□□ -1.04
NEDD9-203ENST00000397378 KCNC2Q96PR1 638 aa8.58□□□□□ -1.04
NEDD9-203ENST00000397378 MAPKAP1Q9BPZ7 522 aa8.58□□□□□ -1.04
NEDD9-203ENST00000397378 MED18Q9BUE0 208 aa8.58□□□□□ -1.04
NEDD9-203ENST00000397378 CAPS2Q9BXY5 557 aa8.58□□□□□ -1.04
NEDD9-203ENST00000397378 UGT2B28Q9BY64 529 aa8.58□□□□□ -1.04
NEDD9-203ENST00000397378 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.58□□□□□ -1.043e-10■■□□□ 12.6
NEDD9-203ENST00000397378 PSD3Q9NYI0 1048 aa8.58□□□□□ -1.04
NEDD9-203ENST00000397378 GPRC5BQ9NZH0 403 aa8.58□□□□□ -1.04
NEDD9-203ENST00000397378 FETUBQ9UGM5 382 aa8.58□□□□□ -1.04
NEDD9-203ENST00000397378 SLC6A5Q9Y345 797 aa8.58□□□□□ -1.04
NEDD9-203ENST00000397378 OARD1Q9Y530 152 aa8.58□□□□□ -1.04
NEDD9-203ENST00000397378 SPACA6W5XKT8 324 aa8.58□□□□□ -1.04
NEDD9-203ENST00000397378 CAPN14A8MX76 684 aa8.57□□□□□ -1.04
NEDD9-203ENST00000397378 A8MXE2 369 aa8.57□□□□□ -1.04
NEDD9-203ENST00000397378 TP53I11O14683 189 aa8.57□□□□□ -1.04
NEDD9-203ENST00000397378 SNPHO15079 494 aa8.57□□□□□ -1.04
NEDD9-203ENST00000397378 FGF17O60258 216 aa8.57□□□□□ -1.04
NEDD9-203ENST00000397378 ABCB7O75027 752 aa8.57□□□□□ -1.04
NEDD9-203ENST00000397378 TRAPPC6AO75865 159 aa8.57□□□□□ -1.04
NEDD9-203ENST00000397378 SCELO95171 688 aa8.57□□□□□ -1.04
NEDD9-203ENST00000397378 RCBTB2O95199 551 aa8.57□□□□□ -1.04
NEDD9-203ENST00000397378 ZNF37AP17032 561 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms