RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 NUDT8Q8WV74 236 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 ANKRD49Q8WVL7 239 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 SLCO2A1Q92959 643 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 RNASE6Q93091 150 aaKnown RBP8.06□□□□□ -1.12
CAPN3-208ENST00000397204 ANKRD9Q96BM1 317 aaPredicted RBP8.06□□□□□ -1.12
CAPN3-208ENST00000397204 PTCD3Q96EY7 689 aaKnown RBP8.06□□□□□ -1.12
CAPN3-208ENST00000397204 CFAP36Q96G28 342 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 CSF3RQ99062 836 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 MAPKAP1Q9BPZ7 522 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 GPATCH1Q9BRR8 931 aaKnown RBP8.06□□□□□ -1.12
CAPN3-208ENST00000397204 DERL2Q9GZP9 239 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 DNAJC11Q9NVH1 559 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.06□□□□□ -1.12
CAPN3-208ENST00000397204 MS4A12Q9NXJ0 267 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 NSMCE4AQ9NXX6 385 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 MOCS1Q9NZB8 636 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 SPRR3Q9UBC9 169 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 BOKQ9UMX3 212 aaPredicted RBP8.06□□□□□ -1.12
CAPN3-208ENST00000397204 RPH3AQ9Y2J0 694 aaPredicted RBP8.06□□□□□ -1.12
CAPN3-208ENST00000397204 PPP2R2CQ9Y2T4 447 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 TEX264Q9Y6I9 313 aa8.06□□□□□ -1.12
CAPN3-208ENST00000397204 FAM95CA0A1B0GW59 222 aa8.05□□□□□ -1.12
CAPN3-208ENST00000397204 ANKRD33BA6NCL7 494 aa8.05□□□□□ -1.12
CAPN3-208ENST00000397204 CES2O00748 559 aa8.05□□□□□ -1.12
CAPN3-208ENST00000397204 PRAMEF4O60810 478 aa8.05□□□□□ -1.12
CAPN3-208ENST00000397204 STK16O75716 305 aa8.05□□□□□ -1.12
CAPN3-208ENST00000397204 SCELO95171 688 aa8.05□□□□□ -1.12
CAPN3-208ENST00000397204 C1QAP02745 245 aa8.05□□□□□ -1.12
CAPN3-208ENST00000397204 RFPL3SP0C7P2 107 aa8.05□□□□□ -1.12
CAPN3-208ENST00000397204 TIMP3P35625 211 aa8.05□□□□□ -1.12
CAPN3-208ENST00000397204 STT3AP46977 705 aa8.05□□□□□ -1.12
CAPN3-208ENST00000397204 ASCL1P50553 236 aa8.05□□□□□ -1.12
CAPN3-208ENST00000397204 SLC12A2P55011 1212 aa8.05□□□□□ -1.12
CAPN3-208ENST00000397204 ADAM8P78325 824 aa8.05□□□□□ -1.12
CAPN3-208ENST00000397204 IGLV3-21P80748 117 aaPredicted RBP8.05□□□□□ -1.12
CAPN3-208ENST00000397204 HP1BP3Q5SSJ5 553 aaPredicted RBP8.05□□□□□ -1.12
CAPN3-208ENST00000397204 PRAMEF9Q5VWM5 478 aa8.05□□□□□ -1.12
CAPN3-208ENST00000397204 SEM1Q6ZVN7 128 aa8.05□□□□□ -1.12
CAPN3-208ENST00000397204 SYDE1Q6ZW31 735 aaPredicted RBP8.05□□□□□ -1.12
CAPN3-208ENST00000397204 BIVMQ86UB2 503 aa8.05□□□□□ -1.12
CAPN3-208ENST00000397204 KIF18BQ86Y91 864 aa8.05□□□□□ -1.12
CAPN3-208ENST00000397204 MMP21Q8N119 569 aa8.05□□□□□ -1.12
CAPN3-208ENST00000397204 LIX1Q8N485 282 aa8.05□□□□□ -1.12
CAPN3-208ENST00000397204 BBOF1Q8ND07 529 aa8.05□□□□□ -1.12
CAPN3-208ENST00000397204 SREK1Q8WXA9 508 aaKnown RBP8.05□□□□□ -1.12
CAPN3-208ENST00000397204 TANKQ92844 425 aa8.05□□□□□ -1.12
CAPN3-208ENST00000397204 UBE2E3Q969T4 207 aa8.05□□□□□ -1.12
CAPN3-208ENST00000397204 SPACA9Q96E40 222 aaPredicted RBP8.05□□□□□ -1.12
CAPN3-208ENST00000397204 FBXL20Q96IG2 436 aa8.05□□□□□ -1.12
CAPN3-208ENST00000397204 ART5Q96L15 291 aa8.05□□□□□ -1.12
CAPN3-208ENST00000397204 PWWP2AQ96N64 755 aa8.05□□□□□ -1.12
CAPN3-208ENST00000397204 RUNDC3BQ96NL0 473 aa8.05□□□□□ -1.12
CAPN3-208ENST00000397204 DGAT2Q96PD7 388 aa8.05□□□□□ -1.12
CAPN3-208ENST00000397204 GSX1Q9H4S2 264 aaPredicted RBP8.05□□□□□ -1.12
CAPN3-208ENST00000397204 PROK2Q9HC23 129 aa8.05□□□□□ -1.12
CAPN3-208ENST00000397204 MTRF1LQ9UGC7 380 aaKnown RBP8.05□□□□□ -1.12
CAPN3-208ENST00000397204 CHMP2BQ9UQN3 213 aa8.05□□□□□ -1.12
CAPN3-208ENST00000397204 PLEKHA6Q9Y2H5 1048 aa8.05□□□□□ -1.12
CAPN3-208ENST00000397204 PSAT1Q9Y617 370 aa8.05□□□□□ -1.12
CAPN3-208ENST00000397204 TLN2Q9Y4G6 2542 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 IQANK1A0A1B0GTG1 560 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 TUBAL3A6NHL2 446 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 NCF1BA6NI72 391 aaPredicted RBP8.04□□□□□ -1.12
CAPN3-208ENST00000397204 NCF1CA8MVU1 366 aaPredicted RBP8.04□□□□□ -1.12
CAPN3-208ENST00000397204 CAPN14A8MX76 684 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 MSTNO14793 375 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 GOSR1O95249 250 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 IGHA1P01876 353 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 DRD2P14416 443 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 NCF1P14598 390 aaPredicted RBP8.04□□□□□ -1.12
CAPN3-208ENST00000397204 ENDOUP21128 410 aaKnown RBP8.04□□□□□ -1.12
CAPN3-208ENST00000397204 BMP5P22003 454 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 HIST1H1TP22492 207 aaPredicted RBP8.04□□□□□ -1.12
CAPN3-208ENST00000397204 CPN2P22792 545 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 SERPINB1P30740 379 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 TLX1P31314 330 aaPredicted RBP8.04□□□□□ -1.12
CAPN3-208ENST00000397204 RPL21P46778 160 aaKnown RBP8.04□□□□□ -1.12
CAPN3-208ENST00000397204 ARFIP1P53367 373 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 ARL4CP56559 192 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 ATP6V0D1P61421 351 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 POU4F1Q01851 419 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 IRF8Q02556 426 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 PCDH1Q08174 1060 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 CHIT1Q13231 466 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 SNTB1Q13884 538 aaKnown RBP8.04□□□□□ -1.12
CAPN3-208ENST00000397204 E2F2Q14209 437 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 ZNF460Q14592 562 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 PDK4Q16654 411 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 DEPDC1Q5TB30 811 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 TMEM198Q66K66 360 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 OR4C11Q6IEV9 310 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 POMZP3Q6PJE2 187 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 ZNF793Q6ZN11 406 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 SLC29A4Q7RTT9 530 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 LACC1Q8IV20 430 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 C9orf40Q8IXQ3 194 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 LAS2Q8IYD9 372 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 PM20D2Q8IYS1 436 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 ST13P4Q8IZP2 240 aaPredicted RBP8.04□□□□□ -1.12
CAPN3-208ENST00000397204 FAM13CQ8NE31 585 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms