RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 ACOT4Q8N9L9 421 aa13.67□□□□□ -0.22
SEC13-206ENST00000397102 ABTB1Q969K4 478 aaPredicted RBP13.67□□□□□ -0.22
SEC13-206ENST00000397102 RHBDF1Q96CC6 855 aa13.67□□□□□ -0.22
SEC13-206ENST00000397102 PERPQ96FX8 193 aa13.67□□□□□ -0.22
SEC13-206ENST00000397102 CERS2Q96G23 380 aa13.67□□□□□ -0.22
SEC13-206ENST00000397102 RBM18Q96H35 190 aaKnown RBP13.67□□□□□ -0.22
SEC13-206ENST00000397102 RILPQ96NA2 401 aa13.67□□□□□ -0.22
SEC13-206ENST00000397102 WWTR1Q9GZV5 400 aa13.67□□□□□ -0.22
SEC13-206ENST00000397102 SLC17A6Q9P2U8 582 aa13.67□□□□□ -0.22
SEC13-206ENST00000397102 ZNF490Q9ULM2 529 aaPredicted RBP13.67□□□□□ -0.22
SEC13-206ENST00000397102 C15orf41Q9Y2V0 281 aa13.67□□□□□ -0.22
SEC13-206ENST00000397102 DSCAMO60469 2012 aa13.67□□□□□ -0.22
SEC13-206ENST00000397102 IQANK1A0A1B0GTG1 560 aa13.66□□□□□ -0.22
SEC13-206ENST00000397102 CAPN14A8MX76 684 aa13.66□□□□□ -0.22
SEC13-206ENST00000397102 CLGNO14967 610 aa13.66□□□□□ -0.22
SEC13-206ENST00000397102 CRLF1O75462 422 aa13.66□□□□□ -0.22
SEC13-206ENST00000397102 SCELO95171 688 aa13.66□□□□□ -0.22
SEC13-206ENST00000397102 CYP4B1P13584 511 aa13.66□□□□□ -0.22
SEC13-206ENST00000397102 SLCO1A2P46721 670 aa13.66□□□□□ -0.22
SEC13-206ENST00000397102 MASP1P48740 699 aa13.66□□□□□ -0.22
SEC13-206ENST00000397102 HERVK_113P63132 956 aa13.66□□□□□ -0.22
SEC13-206ENST00000397102 ERVK-8P63133 956 aa13.66□□□□□ -0.22
SEC13-206ENST00000397102 CBLBQ13191 982 aa13.66□□□□□ -0.22
SEC13-206ENST00000397102 EBPQ15125 230 aaKnown RBP13.66□□□□□ -0.22
SEC13-206ENST00000397102 SPRED3Q2MJR0 410 aa13.66□□□□□ -0.22
SEC13-206ENST00000397102 EIPR1Q53HC9 387 aa13.66□□□□□ -0.22
SEC13-206ENST00000397102 WIPI1Q5MNZ9 446 aaPredicted RBP13.66□□□□□ -0.22
SEC13-206ENST00000397102 TEDDM1Q5T9Z0 273 aa13.66□□□□□ -0.22
SEC13-206ENST00000397102 FNDC7Q5VTL7 733 aa13.66□□□□□ -0.22
SEC13-206ENST00000397102 RNF111Q6ZNA4 994 aa13.66□□□□□ -0.22
SEC13-206ENST00000397102 FRA10AC1Q70Z53 315 aa13.66□□□□□ -0.22
SEC13-206ENST00000397102 ADAMTSL2Q86TH1 951 aa13.66□□□□□ -0.22
SEC13-206ENST00000397102 PACS2Q86VP3 889 aa13.66□□□□□ -0.22
SEC13-206ENST00000397102 TAGAPQ8N103 731 aa13.66□□□□□ -0.22
SEC13-206ENST00000397102 SPPL2AQ8TCT8 520 aa13.66□□□□□ -0.22
SEC13-206ENST00000397102 PPWD1Q96BP3 646 aaKnown RBP13.66□□□□□ -0.22
SEC13-206ENST00000397102 PTCD3Q96EY7 689 aaKnown RBP13.66□□□□□ -0.22
SEC13-206ENST00000397102 GNRHR2Q96P88 292 aa13.66□□□□□ -0.22
SEC13-206ENST00000397102 TM9SF2Q99805 663 aa13.66□□□□□ -0.22
SEC13-206ENST00000397102 ERVK-6Q9BXR3 956 aa13.66□□□□□ -0.22
SEC13-206ENST00000397102 ANGPTL4Q9BY76 406 aa13.66□□□□□ -0.22
SEC13-206ENST00000397102 PIGMQ9H3S5 423 aa13.66□□□□□ -0.22
SEC13-206ENST00000397102 C6orf203Q9P0P8 240 aaPredicted RBP13.66□□□□□ -0.22
SEC13-206ENST00000397102 ERVK-19Q9WJR5 959 aa13.66□□□□□ -0.22
SEC13-206ENST00000397102 NPFFR2Q9Y5X5 522 aa13.66□□□□□ -0.22
SEC13-206ENST00000397102 MED12LQ86YW9 2145 aa13.66□□□□□ -0.22
SEC13-206ENST00000397102 OR6C76A6NM76 312 aa13.65□□□□□ -0.22
SEC13-206ENST00000397102 DEFB108AA8MXU0 73 aa13.65□□□□□ -0.22
SEC13-206ENST00000397102 RTCAO00442 366 aaKnown RBP13.65□□□□□ -0.22
SEC13-206ENST00000397102 SIAH2O43255 324 aa13.65□□□□□ -0.22
SEC13-206ENST00000397102 CTIFO43310 598 aaKnown RBP13.65□□□□□ -0.22
SEC13-206ENST00000397102 PRAMEF4O60810 478 aa13.65□□□□□ -0.22
SEC13-206ENST00000397102 RCBTB2O95199 551 aa13.65□□□□□ -0.22
SEC13-206ENST00000397102 CNOT4O95628 575 aaKnown RBP13.65□□□□□ -0.22
SEC13-206ENST00000397102 ACTL6AO96019 429 aa13.65□□□□□ -0.22
SEC13-206ENST00000397102 ALOX15P16050 662 aaPredicted RBP13.65□□□□□ -0.22
SEC13-206ENST00000397102 HIST1H1TP22492 207 aaPredicted RBP13.65□□□□□ -0.22
SEC13-206ENST00000397102 SOX18P35713 384 aa13.65□□□□□ -0.22
SEC13-206ENST00000397102 NAGLUP54802 743 aa13.65□□□□□ -0.22
SEC13-206ENST00000397102 DIO3P55073 304 aa13.65□□□□□ -0.22
SEC13-206ENST00000397102 SLC37A1P57057 533 aa13.65□□□□□ -0.22
SEC13-206ENST00000397102 TOMM20Q15388 145 aa13.65□□□□□ -0.22
SEC13-206ENST00000397102 PRAMEF9Q5VWM5 478 aa13.65□□□□□ -0.22
SEC13-206ENST00000397102 BICRALQ6AI39 1079 aa13.65□□□□□ -0.22
SEC13-206ENST00000397102 C20orf204Q6ZNR8 217 aa13.65□□□□□ -0.22
SEC13-206ENST00000397102 PPIL6Q8IXY8 311 aa13.65□□□□□ -0.22
SEC13-206ENST00000397102 ST13P4Q8IZP2 240 aaPredicted RBP13.65□□□□□ -0.22
SEC13-206ENST00000397102 PPP1R14CQ8TAE6 165 aa13.65□□□□□ -0.22
SEC13-206ENST00000397102 WDR34Q96EX3 536 aa13.65□□□□□ -0.22
SEC13-206ENST00000397102 TMEM41AQ96HV5 264 aa13.65□□□□□ -0.22
SEC13-206ENST00000397102 SECISBP2Q96T21 854 aaKnown RBP13.65□□□□□ -0.22
SEC13-206ENST00000397102 PELOQ9BRX2 385 aaKnown RBP13.65□□□□□ -0.22
SEC13-206ENST00000397102 NAT9Q9BTE0 207 aa13.65□□□□□ -0.22
SEC13-206ENST00000397102 EFCAB11Q9BUY7 163 aa13.65□□□□□ -0.22
SEC13-206ENST00000397102 MS4A8Q9BY19 250 aa13.65□□□□□ -0.22
SEC13-206ENST00000397102 GSX2Q9BZM3 304 aa13.65□□□□□ -0.22
SEC13-206ENST00000397102 ACBD3Q9H3P7 528 aa13.65□□□□□ -0.22
SEC13-206ENST00000397102 RPF2Q9H7B2 306 aaKnown RBP13.65□□□□□ -0.22
SEC13-206ENST00000397102 UBTD1Q9HAC8 227 aa13.65□□□□□ -0.22
SEC13-206ENST00000397102 DNAJC11Q9NVH1 559 aa13.65□□□□□ -0.22
SEC13-206ENST00000397102 FETUBQ9UGM5 382 aa13.65□□□□□ -0.22
SEC13-206ENST00000397102 ZANQ9Y493 2812 aa13.65□□□□□ -0.22
SEC13-206ENST00000397102 A8MXE2 369 aa13.64□□□□□ -0.23
SEC13-206ENST00000397102 CPN1P15169 458 aa13.64□□□□□ -0.23
SEC13-206ENST00000397102 CD22P20273 847 aa13.64□□□□□ -0.23
SEC13-206ENST00000397102 CXCR5P32302 372 aa13.64□□□□□ -0.23
SEC13-206ENST00000397102 TMED10P49755 219 aaKnown RBP13.64□□□□□ -0.23
SEC13-206ENST00000397102 FBXW4P57775 412 aa13.64□□□□□ -0.23
SEC13-206ENST00000397102 EEF1A1P68104 462 aaKnown RBP13.64□□□□□ -0.23
SEC13-206ENST00000397102 LAPTM5Q13571 262 aa13.64□□□□□ -0.23
SEC13-206ENST00000397102 DOC2AQ14183 400 aa13.64□□□□□ -0.23
SEC13-206ENST00000397102 ZNF267Q14586 743 aaPredicted RBP13.64□□□□□ -0.23
SEC13-206ENST00000397102 TSNQ15631 228 aaKnown RBP13.64□□□□□ -0.23
SEC13-206ENST00000397102 AP5B1Q2VPB7 878 aa13.64□□□□□ -0.23
SEC13-206ENST00000397102 EEF1A1P5Q5VTE0 462 aa13.64□□□□□ -0.23
SEC13-206ENST00000397102 ADGRE4PQ86SQ3 457 aa13.64□□□□□ -0.23
SEC13-206ENST00000397102 ZNF441Q8N8Z8 693 aa13.64□□□□□ -0.23
SEC13-206ENST00000397102 SLC44A1Q8WWI5 657 aa13.64□□□□□ -0.23
SEC13-206ENST00000397102 TANKQ92844 425 aa13.64□□□□□ -0.23
SEC13-206ENST00000397102 TP53INP1Q96A56 240 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms