RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 OR7G1Q8NGA0 311 aa13.21□□□□□ -0.3
NUP98-204ENST00000397004 OR52P1PQ8NH57 321 aa13.21□□□□□ -0.3
NUP98-204ENST00000397004 NELL2Q99435 816 aa13.21□□□□□ -0.3
NUP98-204ENST00000397004 MYNNQ9NPC7 610 aa13.21□□□□□ -0.3
NUP98-204ENST00000397004 CREBZFQ9NS37 354 aa13.21□□□□□ -0.3
NUP98-204ENST00000397004 TMA7Q9Y2S6 64 aaKnown RBP13.21□□□□□ -0.3
NUP98-204ENST00000397004 NOTOA8MTQ0 251 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 CENPBD1B2RD01 187 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 H3BN98 237 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 HMGN4O00479 90 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 PRRG1O14668 218 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 LEFTY1O75610 366 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 NCR1O76036 304 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 ADAP00813 363 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 MMP11P24347 488 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 GABRR2P28476 465 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 MAN2A2P49641 1150 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 XKP51811 444 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 FABP5Q01469 135 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 TAP2Q03519 686 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 MLLT11Q13015 90 aaPredicted RBP13.2□□□□□ -0.3
NUP98-204ENST00000397004 GRIN2CQ14957 1233 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 TRIM60Q495X7 471 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 RNF180Q86T96 592 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 SIMC1Q8NDZ2 872 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 CXorf40BQ96DE9 158 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 SOSTQ9BQB4 213 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 RACGAP1Q9H0H5 632 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 LHX9Q9NQ69 397 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 MALT1Q9UDY8 824 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 LRRK1Q38SD2 2015 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 M0R3H8 397 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 POLR1CO15160 346 aaPredicted RBP13.2□□□□□ -0.3
NUP98-204ENST00000397004 OR10H3O60404 316 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 LILRB5O75023 590 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 CKMP06732 381 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 TIMP2P16035 220 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 FZD5Q13467 585 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 REEP3Q6NUK4 255 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 GDPD4Q6W3E5 623 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 DEF8Q6ZN54 512 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 ADIPOR2Q86V24 386 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 ZNF366Q8N895 744 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 ZNF485Q8NCK3 441 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 CD99L2Q8TCZ2 262 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 GATAD2BQ8WXI9 593 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 WDR34Q96EX3 536 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 PPP1R3EQ9H7J1 279 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 ACAD8Q9UKU7 415 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 TNFRSF10AO00220 468 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 FOXE1O00358 373 aaPredicted RBP13.2□□□□□ -0.3
NUP98-204ENST00000397004 PPM1DO15297 605 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 URODP06132 367 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 CPEP16870 476 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 MYL9P24844 172 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 TMC8Q8IU68 726 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 ZNF557Q8N988 423 aaPredicted RBP13.2□□□□□ -0.3
NUP98-204ENST00000397004 MND1Q9BWT6 205 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 SGPP1Q9BX95 441 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 CTPS2Q9NRF8 586 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 MYO15AQ9UKN7 3530 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 PLAGL1Q9UM63 463 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 GPR52Q9Y2T5 361 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 KCNE2Q9Y6J6 123 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 PLPP1O14494 284 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 MPZL2O60487 215 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 POP4O95707 220 aaKnown RBP13.2□□□□□ -0.3
NUP98-204ENST00000397004 RPS5P46782 204 aaKnown RBP13.2□□□□□ -0.3
NUP98-204ENST00000397004 PRLHRP49683 370 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 BNC1Q01954 994 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 TMEM115Q12893 351 aaPredicted RBP13.2□□□□□ -0.3
NUP98-204ENST00000397004 TARDBPQ13148 414 aaKnown RBP eCLIP13.2□□□□□ -0.3
NUP98-204ENST00000397004 SYPL1Q16563 259 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 MPP7Q5T2T1 576 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 PODNL1Q6PEZ8 512 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 TMEM220Q6QAJ8 160 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 USP30Q70CQ3 517 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 CPXM2Q8N436 756 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 YIPF7Q8N8F6 280 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 VN1R2Q8NFZ6 395 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 TMEM159Q96B96 161 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 UPRTQ96BW1 309 aa13.2□□□□□ -0.3
NUP98-204ENST00000397004 MAGEB10Q96LZ2 347 aaPredicted RBP13.2□□□□□ -0.3
NUP98-204ENST00000397004 ZNF582Q96NG8 517 aaPredicted RBP13.2□□□□□ -0.3
NUP98-204ENST00000397004 FABP12A6NFH5 140 aa13.19□□□□□ -0.3
NUP98-204ENST00000397004 PLOD3O60568 738 aa13.19□□□□□ -0.3
NUP98-204ENST00000397004 C1GALT1C1LP0DN25 315 aa13.19□□□□□ -0.3
NUP98-204ENST00000397004 CCR2P41597 374 aa13.19□□□□□ -0.3
NUP98-204ENST00000397004 AGFG1P52594 562 aaKnown RBP13.19□□□□□ -0.3
NUP98-204ENST00000397004 WDR5P61964 334 aaKnown RBP13.19□□□□□ -0.3
NUP98-204ENST00000397004 LRRC74AQ0VAA2 488 aa13.19□□□□□ -0.3
NUP98-204ENST00000397004 UNC5DQ6UXZ4 953 aa13.19□□□□□ -0.3
NUP98-204ENST00000397004 TAGAPQ8N103 731 aa13.19□□□□□ -0.3
NUP98-204ENST00000397004 OR5D16Q8NGK9 328 aa13.19□□□□□ -0.3
NUP98-204ENST00000397004 CYB5D2Q8WUJ1 264 aa13.19□□□□□ -0.3
NUP98-204ENST00000397004 VWCEQ96DN2 955 aa13.19□□□□□ -0.3
NUP98-204ENST00000397004 DIRAS2Q96HU8 199 aa13.19□□□□□ -0.3
NUP98-204ENST00000397004 ZFYVE19Q96K21 471 aa13.19□□□□□ -0.3
NUP98-204ENST00000397004 LRR1Q96L50 414 aa13.19□□□□□ -0.3
NUP98-204ENST00000397004 SLC46A2Q9BY10 475 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms