RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 DIMT1Q9UNQ2 313 aaKnown RBP3.14□□□□□ -1.91
CMC1-202ENST00000396610 FOXA2Q9Y261 457 aaPredicted RBP3.14□□□□□ -1.91
CMC1-202ENST00000396610 TRAV9-2A0A087WT02 112 aa3.13□□□□□ -1.91
CMC1-202ENST00000396610 A0A1W2PRV1 198 aa3.13□□□□□ -1.91
CMC1-202ENST00000396610 RNF212BA8MTL3 300 aa3.13□□□□□ -1.91
CMC1-202ENST00000396610 MEI4A8MW99 385 aa3.13□□□□□ -1.91
CMC1-202ENST00000396610 ZNF487B1APH4 448 aa3.13□□□□□ -1.91
CMC1-202ENST00000396610 THY1P04216 161 aa3.13□□□□□ -1.91
CMC1-202ENST00000396610 GSTO1P78417 241 aa3.13□□□□□ -1.91
CMC1-202ENST00000396610 C17orf67Q0P5P2 114 aa3.13□□□□□ -1.91
CMC1-202ENST00000396610 CRMP1Q14194 572 aa3.13□□□□□ -1.91
CMC1-202ENST00000396610 EMC2Q15006 297 aa3.13□□□□□ -1.91
CMC1-202ENST00000396610 KRT31Q15323 416 aa3.13□□□□□ -1.91
CMC1-202ENST00000396610 RNF212Q495C1 297 aa3.13□□□□□ -1.91
CMC1-202ENST00000396610 EPC2Q52LR7 807 aa3.13□□□□□ -1.91
CMC1-202ENST00000396610 CCDC184Q52MB2 194 aa3.13□□□□□ -1.91
CMC1-202ENST00000396610 ATAD3CQ5T2N8 411 aa3.13□□□□□ -1.91
CMC1-202ENST00000396610 C1QTNF12Q5T7M4 302 aa3.13□□□□□ -1.91
CMC1-202ENST00000396610 SH2D6Q7Z4S9 175 aa3.13□□□□□ -1.91
CMC1-202ENST00000396610 IQCA1Q86XH1 822 aa3.13□□□□□ -1.91
CMC1-202ENST00000396610 GPD1LQ8N335 351 aa3.13□□□□□ -1.91
CMC1-202ENST00000396610 SIDT2Q8NBJ9 832 aaKnown RBP3.13□□□□□ -1.91
CMC1-202ENST00000396610 KLHL30-AS1Q8NEE0 82 aa3.13□□□□□ -1.91
CMC1-202ENST00000396610 OR4A16Q8NH70 328 aa3.13□□□□□ -1.91
CMC1-202ENST00000396610 NTNG2Q96CW9 530 aa3.13□□□□□ -1.91
CMC1-202ENST00000396610 RAB3CQ96E17 227 aa3.13□□□□□ -1.91
CMC1-202ENST00000396610 COG3Q96JB2 828 aa3.13□□□□□ -1.91
CMC1-202ENST00000396610 JPH2Q9BR39 696 aaPredicted RBP3.13□□□□□ -1.91
CMC1-202ENST00000396610 TSPYL1Q9H0U9 437 aa3.13□□□□□ -1.91
CMC1-202ENST00000396610 CUTCQ9NTM9 273 aa3.13□□□□□ -1.91
CMC1-202ENST00000396610 CWC25Q9NXE8 425 aaPredicted RBP3.13□□□□□ -1.91
CMC1-202ENST00000396610 SLC6A5Q9Y345 797 aa3.13□□□□□ -1.91
CMC1-202ENST00000396610 NAALAD2Q9Y3Q0 740 aa3.13□□□□□ -1.91
CMC1-202ENST00000396610 KIAA1217Q5T5P2 1943 aa3.13□□□□□ -1.91
CMC1-202ENST00000396610 E2F3O00716 465 aa3.12□□□□□ -1.91
CMC1-202ENST00000396610 TXNDC12O95881 172 aa3.12□□□□□ -1.91
CMC1-202ENST00000396610 CALML3P27482 149 aa3.12□□□□□ -1.91
CMC1-202ENST00000396610 HMGCLP35914 325 aa3.12□□□□□ -1.91
CMC1-202ENST00000396610 ABRAXAS2Q15018 415 aa3.12□□□□□ -1.91
CMC1-202ENST00000396610 SGCBQ16585 318 aa3.12□□□□□ -1.91
CMC1-202ENST00000396610 C14orf28Q4W4Y0 310 aa3.12□□□□□ -1.91
CMC1-202ENST00000396610 MPPE1Q53F39 396 aa3.12□□□□□ -1.91
CMC1-202ENST00000396610 ODF2Q5BJF6 829 aa3.12□□□□□ -1.91
CMC1-202ENST00000396610 LIPJQ5W064 366 aa3.12□□□□□ -1.91
CMC1-202ENST00000396610 IYDQ6PHW0 289 aa3.12□□□□□ -1.91
CMC1-202ENST00000396610 BAIAP2L2Q6UXY1 529 aa3.12□□□□□ -1.91
CMC1-202ENST00000396610 CCDC91Q7Z6B0 441 aa3.12□□□□□ -1.91
CMC1-202ENST00000396610 SERPINA12Q8IW75 414 aa3.12□□□□□ -1.91
CMC1-202ENST00000396610 FUNDC2Q9BWH2 189 aa3.12□□□□□ -1.91
CMC1-202ENST00000396610 ZBP1Q9H171 429 aa3.12□□□□□ -1.91
CMC1-202ENST00000396610 SLC26A1Q9H2B4 701 aa3.12□□□□□ -1.91
CMC1-202ENST00000396610 ZCCHC3Q9NUD5 404 aaKnown RBP3.12□□□□□ -1.91
CMC1-202ENST00000396610 DDX28Q9NUL7 540 aaKnown RBP3.12□□□□□ -1.91
CMC1-202ENST00000396610 DNAJC11Q9NVH1 559 aa3.12□□□□□ -1.91
CMC1-202ENST00000396610 RCOR3Q9P2K3 495 aaPredicted RBP3.12□□□□□ -1.91
CMC1-202ENST00000396610 MAD2L2Q9UI95 211 aa3.12□□□□□ -1.91
CMC1-202ENST00000396610 SLC28A1O00337 649 aa3.11□□□□□ -1.91
CMC1-202ENST00000396610 PIGRP01833 764 aa3.11□□□□□ -1.91
CMC1-202ENST00000396610 MBL2P11226 248 aaPredicted RBP3.11□□□□□ -1.91
CMC1-202ENST00000396610 UGT1A6P19224 532 aa3.11□□□□□ -1.91
CMC1-202ENST00000396610 CYP3A5P20815 502 aa3.11□□□□□ -1.91
CMC1-202ENST00000396610 STIP1P31948 543 aaKnown RBP3.11□□□□□ -1.91
CMC1-202ENST00000396610 UCP2P55851 309 aa3.11□□□□□ -1.91
CMC1-202ENST00000396610 TRA2BP62995 288 aaKnown RBP3.11□□□□□ -1.91
CMC1-202ENST00000396610 HERV-K104P63124 156 aa3.11□□□□□ -1.91
CMC1-202ENST00000396610 NAAAQ02083 359 aa3.11□□□□□ -1.91
CMC1-202ENST00000396610 KLF5Q13887 457 aaPredicted RBP3.11□□□□□ -1.91
CMC1-202ENST00000396610 ANKRD55Q3KP44 614 aa3.11□□□□□ -1.91
CMC1-202ENST00000396610 TIMM50Q3ZCQ8 353 aa3.11□□□□□ -1.91
CMC1-202ENST00000396610 ACER2Q5QJU3 275 aa3.11□□□□□ -1.91
CMC1-202ENST00000396610 LINC00242Q5T6M2 205 aa3.11□□□□□ -1.91
CMC1-202ENST00000396610 RTL6Q6ICC9 239 aa3.11□□□□□ -1.91
CMC1-202ENST00000396610 STEAP1BQ6NZ63 245 aa3.11□□□□□ -1.91
CMC1-202ENST00000396610 ABRAXAS1Q6UWZ7 409 aa3.11□□□□□ -1.91
CMC1-202ENST00000396610 TICAM2Q86XR7 235 aa3.11□□□□□ -1.91
CMC1-202ENST00000396610 SLC22A18ASQ8N1D0 253 aa3.11□□□□□ -1.91
CMC1-202ENST00000396610 FBXW8Q8N3Y1 598 aa3.11□□□□□ -1.91
CMC1-202ENST00000396610 SFRP1Q8N474 314 aa3.11□□□□□ -1.91
CMC1-202ENST00000396610 BEST4Q8NFU0 473 aa3.11□□□□□ -1.91
CMC1-202ENST00000396610 ZNF671Q8TAW3 534 aa3.11□□□□□ -1.91
CMC1-202ENST00000396610 MRAPQ8TCY5 172 aa3.11□□□□□ -1.91
CMC1-202ENST00000396610 ST7LQ8TDW4 575 aa3.11□□□□□ -1.91
CMC1-202ENST00000396610 CFAP36Q96G28 342 aa3.11□□□□□ -1.91
CMC1-202ENST00000396610 VMP1Q96GC9 406 aa3.11□□□□□ -1.91
CMC1-202ENST00000396610 RBM18Q96H35 190 aaKnown RBP3.11□□□□□ -1.91
CMC1-202ENST00000396610 TTYH2Q9BSA4 534 aa3.11□□□□□ -1.91
CMC1-202ENST00000396610 ST6GALNAC5Q9BVH7 336 aa3.11□□□□□ -1.91
CMC1-202ENST00000396610 MRPL9Q9BYD2 267 aaKnown RBP3.11□□□□□ -1.91
CMC1-202ENST00000396610 GANQ9H2C0 597 aa3.11□□□□□ -1.91
CMC1-202ENST00000396610 Q9HAA7 133 aa3.11□□□□□ -1.91
CMC1-202ENST00000396610 AMBNQ9NP70 447 aa3.11□□□□□ -1.91
CMC1-202ENST00000396610 TNFRSF19Q9NS68 423 aa3.11□□□□□ -1.91
CMC1-202ENST00000396610 ACOXLQ9NUZ1 547 aa3.11□□□□□ -1.91
CMC1-202ENST00000396610 RNF24Q9Y225 148 aa3.11□□□□□ -1.91
CMC1-202ENST00000396610 VSIG4Q9Y279 399 aa3.11□□□□□ -1.91
CMC1-202ENST00000396610 FAM170AA1A519 330 aa3.1□□□□□ -1.91
CMC1-202ENST00000396610 YJEFN3A6XGL0 299 aa3.1□□□□□ -1.91
CMC1-202ENST00000396610 TSPAN2O60636 221 aa3.1□□□□□ -1.91
CMC1-202ENST00000396610 SRPX2O60687 465 aaPredicted RBP3.1□□□□□ -1.91
CMC1-202ENST00000396610 RHBDL1O75783 438 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms