RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 ARPC4P59998 168 aa12.65□□□□□ -0.38
TRIM40-207ENST00000396581 EFNB1P98172 346 aa12.65□□□□□ -0.38
TRIM40-207ENST00000396581 C1DQ13901 141 aaKnown RBP12.65□□□□□ -0.38
TRIM40-207ENST00000396581 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.65□□□□□ -0.38
TRIM40-207ENST00000396581 MPPE1Q53F39 396 aa12.65□□□□□ -0.38
TRIM40-207ENST00000396581 ZNF628Q5EBL2 1059 aa12.65□□□□□ -0.38
TRIM40-207ENST00000396581 SNAP47Q5SQN1 464 aa12.65□□□□□ -0.38
TRIM40-207ENST00000396581 TCTN3Q6NUS6 607 aa12.65□□□□□ -0.38
TRIM40-207ENST00000396581 CEACAM20Q6UY09 585 aa12.65□□□□□ -0.38
TRIM40-207ENST00000396581 UTS2BQ765I0 119 aa12.65□□□□□ -0.38
TRIM40-207ENST00000396581 CMTM8Q8IZV2 173 aa12.65□□□□□ -0.38
TRIM40-207ENST00000396581 FBXO15Q8NCQ5 510 aaPredicted RBP12.65□□□□□ -0.38
TRIM40-207ENST00000396581 GPR32P1Q8NGA4 272 aa12.65□□□□□ -0.38
TRIM40-207ENST00000396581 TIFAQ96CG3 184 aa12.65□□□□□ -0.38
TRIM40-207ENST00000396581 RSPO3Q9BXY4 272 aaPredicted RBP12.65□□□□□ -0.38
TRIM40-207ENST00000396581 DMRT3Q9NQL9 472 aa12.65□□□□□ -0.38
TRIM40-207ENST00000396581 CD84Q9UIB8 345 aa12.65□□□□□ -0.38
TRIM40-207ENST00000396581 A0A1W2PQL4 384 aaPredicted RBP12.65□□□□□ -0.39
TRIM40-207ENST00000396581 A0A1W2PRB8 838 aa12.65□□□□□ -0.39
TRIM40-207ENST00000396581 FABP12A6NFH5 140 aa12.65□□□□□ -0.39
TRIM40-207ENST00000396581 TFECO14948 347 aaPredicted RBP12.65□□□□□ -0.39
TRIM40-207ENST00000396581 RHOP08100 348 aa12.65□□□□□ -0.39
TRIM40-207ENST00000396581 EPCAMP16422 314 aa12.65□□□□□ -0.39
TRIM40-207ENST00000396581 CTSOP43234 321 aaPredicted RBP12.65□□□□□ -0.39
TRIM40-207ENST00000396581 STK19P49842 368 aaPredicted RBP12.65□□□□□ -0.39
TRIM40-207ENST00000396581 ERVK-21P61565 698 aa12.65□□□□□ -0.39
TRIM40-207ENST00000396581 C2orf80Q0P641 193 aa12.65□□□□□ -0.39
TRIM40-207ENST00000396581 TAB1Q15750 504 aa12.65□□□□□ -0.39
TRIM40-207ENST00000396581 FLYWCH1Q4VC44 716 aa12.65□□□□□ -0.39
TRIM40-207ENST00000396581 PPP2R2DQ66LE6 453 aa12.65□□□□□ -0.39
TRIM40-207ENST00000396581 PGBD2Q6P3X8 592 aa12.65□□□□□ -0.39
TRIM40-207ENST00000396581 CD300LDQ6UXZ3 194 aa12.65□□□□□ -0.39
TRIM40-207ENST00000396581 IKBIPQ70UQ0 350 aa12.65□□□□□ -0.39
TRIM40-207ENST00000396581 OR5AK3PQ8NH89 298 aa12.65□□□□□ -0.39
TRIM40-207ENST00000396581 ZFAND1Q8TCF1 268 aa12.65□□□□□ -0.39
TRIM40-207ENST00000396581 JPH3Q8WXH2 748 aaPredicted RBP12.65□□□□□ -0.39
TRIM40-207ENST00000396581 TTC9Q92623 222 aa12.65□□□□□ -0.39
TRIM40-207ENST00000396581 TCEAL4Q96EI5 215 aa12.65□□□□□ -0.39
TRIM40-207ENST00000396581 TMEM121BQ9BXQ6 578 aaPredicted RBP12.65□□□□□ -0.39
TRIM40-207ENST00000396581 POLDIP3Q9BY77 421 aaKnown RBP12.65□□□□□ -0.39
TRIM40-207ENST00000396581 A4GALTQ9NPC4 353 aa12.65□□□□□ -0.39
TRIM40-207ENST00000396581 ISYNA1Q9NPH2 558 aa12.65□□□□□ -0.39
TRIM40-207ENST00000396581 MRPS18AQ9NVS2 196 aaKnown RBP12.65□□□□□ -0.39
TRIM40-207ENST00000396581 TMCC3Q9ULS5 477 aa12.65□□□□□ -0.39
TRIM40-207ENST00000396581 SF3B6Q9Y3B4 125 aaKnown RBP12.65□□□□□ -0.39
TRIM40-207ENST00000396581 ZNF197O14709 1029 aa12.64□□□□□ -0.39
TRIM40-207ENST00000396581 MYL12BO14950 172 aa12.64□□□□□ -0.39
TRIM40-207ENST00000396581 PLXNA2O75051 1894 aa12.64□□□□□ -0.39
TRIM40-207ENST00000396581 POP4O95707 220 aaKnown RBP12.64□□□□□ -0.39
TRIM40-207ENST00000396581 FAM157BP0CG42 384 aa12.64□□□□□ -0.39
TRIM40-207ENST00000396581 FEN1P39748 380 aaKnown RBP12.64□□□□□ -0.39
TRIM40-207ENST00000396581 BDKRB1P46663 353 aa12.64□□□□□ -0.39
TRIM40-207ENST00000396581 XKP51811 444 aa12.64□□□□□ -0.39
TRIM40-207ENST00000396581 GAS1P54826 345 aa12.64□□□□□ -0.39
TRIM40-207ENST00000396581 HNRNPA0Q13151 305 aaKnown RBP12.64□□□□□ -0.39
TRIM40-207ENST00000396581 TNK1Q13470 666 aa12.64□□□□□ -0.39
TRIM40-207ENST00000396581 HEPACAMQ14CZ8 416 aa12.64□□□□□ -0.39
TRIM40-207ENST00000396581 CCDC58Q4VC31 144 aa12.64□□□□□ -0.39
TRIM40-207ENST00000396581 DCST1Q5T197 706 aa12.64□□□□□ -0.39
TRIM40-207ENST00000396581 LIPKQ5VXJ0 399 aa12.64□□□□□ -0.39
TRIM40-207ENST00000396581 PAQR6Q6TCH4 344 aa12.64□□□□□ -0.39
TRIM40-207ENST00000396581 CASP12Q6UXS9 341 aa12.64□□□□□ -0.39
TRIM40-207ENST00000396581 TMPRSS11BQ86T26 416 aa12.64□□□□□ -0.39
TRIM40-207ENST00000396581 PEX5LQ8IYB4 626 aa12.64□□□□□ -0.39
TRIM40-207ENST00000396581 TRAM1L1Q8N609 369 aa12.64□□□□□ -0.39
TRIM40-207ENST00000396581 NELL2Q99435 816 aa12.64□□□□□ -0.39
TRIM40-207ENST00000396581 EFCAB11Q9BUY7 163 aa12.64□□□□□ -0.39
TRIM40-207ENST00000396581 FAM83DQ9H4H8 585 aa12.64□□□□□ -0.39
TRIM40-207ENST00000396581 SYNDIG1Q9H7V2 258 aa12.64□□□□□ -0.39
TRIM40-207ENST00000396581 DPP7Q9UHL4 492 aa12.64□□□□□ -0.39
TRIM40-207ENST00000396581 HCN1O60741 890 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 IGFBP1P08833 259 aaPredicted RBP12.63□□□□□ -0.39
TRIM40-207ENST00000396581 POU2F2P09086 479 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 GPC1P35052 558 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 TAS2R50P59544 299 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 FAPQ12884 760 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 PLK5Q496M5 336 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 ZNF658BQ4V348 819 aaPredicted RBP12.63□□□□□ -0.39
TRIM40-207ENST00000396581 PDZK1Q5T2W1 519 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 HENMT1Q5T8I9 393 aaKnown RBP12.63□□□□□ -0.39
TRIM40-207ENST00000396581 DDI2Q5TDH0 399 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 KIAA1211LQ6NV74 962 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 DPY19L3Q6ZPD9 716 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 DUSP18Q8NEJ0 188 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 OR52I1Q8NGK6 324 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 ANGPTL6Q8NI99 470 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 WDR48Q8TAF3 677 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 FOXJ1Q92949 421 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 SCAMP4Q969E2 229 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 TMEM159Q96B96 161 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 NEURL3Q96EH8 262 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 TEFMQ96QE5 360 aaKnown RBP12.63□□□□□ -0.39
TRIM40-207ENST00000396581 NIPAL2Q9H841 368 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 CCL26Q9Y258 94 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 HELZP42694 1942 aaKnown RBP12.63□□□□□ -0.39
TRIM40-207ENST00000396581 OR2AG2A6NM03 316 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 ERVH48-1M5A8F1 160 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 PROM1O43490 865 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 TSPAN6O43657 245 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 SOX14O95416 240 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms