RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 OR5H2Q8NGV7 314 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 PRODH2Q9UF12 536 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 SLIT3O75094 1523 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 LDB2O43679 373 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 EEDO75530 441 aaKnown RBP13.41□□□□□ -0.26
COL4A3-202ENST00000396578 MT-CO2P00403 227 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 PRKACAP17612 351 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 RPL17P18621 184 aaKnown RBP13.41□□□□□ -0.26
COL4A3-202ENST00000396578 CD9P21926 228 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 AK4P27144 223 aaPredicted RBP13.41□□□□□ -0.26
COL4A3-202ENST00000396578 OR2AP1Q8NGE2 309 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 CNOT9Q92600 299 aaKnown RBP13.41□□□□□ -0.26
COL4A3-202ENST00000396578 GPR88Q9GZN0 384 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 J3KR12 359 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 PMM2O15305 246 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 NCS1P62166 190 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 ZNF33AQ06730 810 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 PPP1R3AQ16821 1122 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 PLEKHS1Q5SXH7 462 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 ARHGAP11AQ6P4F7 1023 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 GPR149Q86SP6 731 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 GKN2Q86XP6 184 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 CHDHQ8NE62 594 aaPredicted RBP13.41□□□□□ -0.26
COL4A3-202ENST00000396578 CCDC106Q9BWC9 280 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 REV1Q9UBZ9 1251 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 SCML2Q9UQR0 700 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 BACE2Q9Y5Z0 518 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 ZNF254O75437 659 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 CNTN5O94779 1100 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 OXSR1O95747 527 aaPredicted RBP13.41□□□□□ -0.26
COL4A3-202ENST00000396578 CRYZL1O95825 349 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 NAA10P41227 235 aaPredicted RBP13.41□□□□□ -0.26
COL4A3-202ENST00000396578 KCNC1P48547 511 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 PTH2RP49190 550 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 MALLQ13021 153 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 MYLK3Q32MK0 819 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 PCDHB3Q9Y5E6 796 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 SNHG28P0DPA3 235 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 RAB3BP20337 219 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 MAOAP21397 527 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 PIGFQ07326 219 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 NOGQ13253 232 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 UBXN2BQ14CS0 331 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 SUSD1Q6UWL2 747 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 LILRB2Q8N423 598 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 RAB8BQ92930 207 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 FAM46BQ96A09 425 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 C17orf62Q9BQA9 187 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 TMEM100Q9NV29 134 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 FBXL12Q9NXK8 326 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 OARD1Q9Y530 152 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 PCDHAC2Q9Y5I4 1007 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 A0A1W2PRU2 124 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 TBX18O95935 607 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 ENDOUP21128 410 aaKnown RBP13.4□□□□□ -0.26
COL4A3-202ENST00000396578 THBS2P35442 1172 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 NPRL3Q12980 569 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 PGAM5Q96HS1 289 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 VRK1Q99986 396 aaPredicted RBP13.4□□□□□ -0.26
COL4A3-202ENST00000396578 SMOC2Q9H3U7 446 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 SIX2Q9NPC8 291 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 MRPL15Q9P015 296 aaKnown RBP13.4□□□□□ -0.26
COL4A3-202ENST00000396578 HSPE1-MOB4S4R3N1 261 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 COL5A2P05997 1499 aaPredicted RBP13.4□□□□□ -0.26
COL4A3-202ENST00000396578 HCRTR2O43614 444 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 SC5DO75845 299 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 HEXBP07686 556 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 SGCAQ16586 387 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 UNQ6126/PRO20091Q6UXV3 157 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 CERS5Q8N5B7 392 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 CCDC71LQ8N9Z2 235 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 OR6C4Q8NGE1 309 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 RRNAD1Q96FB5 475 aaKnown RBP13.4□□□□□ -0.26
COL4A3-202ENST00000396578 MEAF6Q9HAF1 191 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 KLHL9Q9P2J3 617 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 FBXL22Q6P050 247 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 LRFN4Q6PJG9 635 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 ZNF696Q9H7X3 374 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 NLE1Q9NVX2 485 aaPredicted RBP13.4□□□□□ -0.26
COL4A3-202ENST00000396578 EBF1Q9UH73 591 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 CPED1A4D0V7 1026 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 PHYHO14832 338 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 GABRA3P34903 492 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 EVI2BP34910 448 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 PSPHP78330 225 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 PAFAH1B3Q15102 231 aaKnown RBP13.4□□□□□ -0.26
COL4A3-202ENST00000396578 RSU1Q15404 277 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 FRZBQ92765 325 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 SYT3Q9BQG1 590 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 GPN2Q9H9Y4 310 aaPredicted RBP13.4□□□□□ -0.26
COL4A3-202ENST00000396578 HS3ST4Q9Y661 456 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 EEF1E1-BLOC1S5C9J1V9 151 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 GMDSO60547 372 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 LILRB5O75023 590 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 MAS1P04201 325 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 LRP8Q14114 963 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 TPRG1Q6ZUI0 275 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 RPS27LQ71UM5 84 aaKnown RBP13.4□□□□□ -0.26
COL4A3-202ENST00000396578 TSTD1Q8NFU3 115 aa13.4□□□□□ -0.26
COL4A3-202ENST00000396578 COQ10AQ96MF6 247 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms