RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 PTX3P26022 381 aaPredicted RBP5.1□□□□□ -1.59
VPS41-203ENST00000395969 ADPRHP54922 357 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 KCNK10P57789 538 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 SNRPD2P62316 118 aaKnown RBP5.1□□□□□ -1.59
VPS41-203ENST00000395969 TAP2Q03519 686 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 IKZF1Q13422 519 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 DGCR6Q14129 220 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 KEAP1Q14145 624 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 FGL2Q14314 439 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 SLC5A12Q1EHB4 618 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 WSCD2Q2TBF2 565 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 GPAT3Q53EU6 434 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 MLIPQ5VWP3 458 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 KIAA1614Q5VZ46 1190 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 FAM122CQ6P4D5 195 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 SHQ1Q6PI26 577 aaKnown RBP5.1□□□□□ -1.59
VPS41-203ENST00000395969 ZNF767PQ75MW2 155 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 NRARPQ7Z6K4 114 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 PLCZ1Q86YW0 608 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 TCTE3Q8IZS6 198 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 HS3ST5Q8IZT8 346 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 AMER2Q8N7J2 671 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 CXorf40AQ8TE69 158 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 SLC13A3Q8WWT9 602 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 SNAPC3Q92966 411 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 CLDN23Q96B33 292 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 TMCO6Q96DC7 493 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 ITCHQ96J02 903 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 EAF1Q96JC9 268 aaPredicted RBP5.1□□□□□ -1.59
VPS41-203ENST00000395969 HIST1H2AHQ96KK5 128 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 FOPNLQ96NB1 174 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 ZNF583Q96ND8 569 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 HIST1H2AJQ99878 128 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 H2AFJQ9BTM1 129 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 ITPAQ9BY32 194 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 ROGDIQ9GZN7 287 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 REXO4Q9GZR2 422 aaKnown RBP5.1□□□□□ -1.59
VPS41-203ENST00000395969 C6orf62Q9GZU0 229 aaPredicted RBP5.1□□□□□ -1.59
VPS41-203ENST00000395969 NUAK2Q9H093 628 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 ZNF556Q9HAH1 456 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 DMRT3Q9NQL9 472 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 RAPGEFL1Q9UHV5 662 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 PCDHB14Q9Y5E9 798 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 KRT87PA6NCN2 255 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 C9JVG2 144 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 CPNE3O75131 537 aaKnown RBP5.09□□□□□ -1.59
VPS41-203ENST00000395969 PDYNP01213 254 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 ANXA6P08133 673 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 PCNAP12004 261 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 SDC1P18827 310 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 EFNA1P20827 205 aaPredicted RBP5.09□□□□□ -1.59
VPS41-203ENST00000395969 CBLP22681 906 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 ERP29P30040 261 aaKnown RBP5.09□□□□□ -1.59
VPS41-203ENST00000395969 GKP32189 559 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 GALNSP34059 522 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 PCGF2P35227 344 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 LIPAP38571 399 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 PBX2P40425 430 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 VIPR2P41587 438 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 SLC15A1P46059 708 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 SLC9A3P48764 834 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 MVDP53602 400 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 CTSCP53634 463 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 PCBP4P57723 403 aaKnown RBP5.09□□□□□ -1.59
VPS41-203ENST00000395969 CHRNB3Q05901 458 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 CNTN1Q12860 1018 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 FAPQ12884 760 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 SLAMF1Q13291 335 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 GRIN2CQ14957 1233 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 TCEA2Q15560 299 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 NKG7Q16617 165 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 DUOXA1Q1HG43 343 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 AP5B1Q2VPB7 878 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 PTCHD3Q3KNS1 767 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 RFTN2Q52LD8 501 aaPredicted RBP5.09□□□□□ -1.59
VPS41-203ENST00000395969 FNDC3BQ53EP0 1204 aaKnown RBP5.09□□□□□ -1.59
VPS41-203ENST00000395969 TOR2AQ5JU69 321 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 PEAR1Q5VY43 1037 aaPredicted RBP5.09□□□□□ -1.59
VPS41-203ENST00000395969 TIGD3Q6B0B8 471 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 XKRXQ6PP77 449 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 TMEM179BQ7Z7N9 219 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 RAB43Q86YS6 212 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 IL17RCQ8NAC3 791 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 SETD9Q8NE22 299 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 CADM4Q8NFZ8 388 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 OR5K1Q8NHB7 308 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 METTL6Q8TCB7 284 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 SFXN5Q8TD22 340 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 GPBAR1Q8TDU6 330 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 CREB3L4Q8TEY5 395 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 ZNF480Q8WV37 535 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 RAD51AP1Q96B01 352 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 TMEM159Q96B96 161 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 TMEM80Q96HE8 168 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 TEX37Q96LM6 180 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 NEDD4LQ96PU5 975 aa5.09□□□□□ -1.59
VPS41-203ENST00000395969 POLR2J2Q9GZM3 115 aaKnown RBP5.09□□□□□ -1.59
VPS41-203ENST00000395969 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.09□□□□□ -1.59
VPS41-203ENST00000395969 POLR2J3Q9H1A7 115 aaKnown RBP5.09□□□□□ -1.59
VPS41-203ENST00000395969 KCNN2Q9H2S1 579 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms