RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 HTRA2O43464 458 aaPredicted RBP5.22□□□□□ -1.57
VPS13C-204ENST00000395898 PRPS1P60891 318 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 ZNF267Q14586 743 aaPredicted RBP5.22□□□□□ -1.57
VPS13C-204ENST00000395898 UAP1L1Q3KQV9 507 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 BLOC1S3Q6QNY0 202 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 PXYLP1Q8TE99 480 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 L3HYPDHQ96EM0 354 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 RXFP3Q9NSD7 469 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 AKAP11Q9UKA4 1901 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 A0A1W2PP55 124 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 GXYLT2A0PJZ3 443 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 DNAJB6O75190 326 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 ALDOAP04075 364 aaKnown RBP5.22□□□□□ -1.57
VPS13C-204ENST00000395898 GJA8P48165 433 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 PHC1P78364 1004 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 LRFN4Q6PJG9 635 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 HACD2Q6Y1H2 254 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 DPY19L3Q6ZPD9 716 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 C6orf120Q7Z4R8 191 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 ENDOVQ8N8Q3 282 aaKnown RBP5.22□□□□□ -1.57
VPS13C-204ENST00000395898 OR13C3Q8NGS6 347 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 HOXB13Q92826 284 aaPredicted RBP5.22□□□□□ -1.57
VPS13C-204ENST00000395898 SH3YL1Q96HL8 342 aaPredicted RBP5.22□□□□□ -1.57
VPS13C-204ENST00000395898 FN3KQ9H479 309 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 MTHFD2LQ9H903 347 aaPredicted RBP5.22□□□□□ -1.57
VPS13C-204ENST00000395898 A0A0G2JPF8 293 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 ZSCAN5BA6NJL1 495 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 HNRNPCL3B7ZW38 293 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 PRAMEF2O60811 474 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 HNRNPCL4P0DMR1 293 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 DRD1P21728 446 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 S100A10P60903 97 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 NIPAL4Q0D2K0 466 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 BNIP3Q12983 259 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 OLIG2Q13516 323 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 CST6Q15828 149 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 ARSJQ5FYB0 599 aaPredicted RBP5.22□□□□□ -1.57
VPS13C-204ENST00000395898 RAB12Q6IQ22 244 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 TEX26Q8N6G2 289 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 FIBINQ8TAL6 211 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 ZNF431Q8TF32 576 aaPredicted RBP5.22□□□□□ -1.57
VPS13C-204ENST00000395898 DDIT4LQ96D03 193 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 SARDHQ9UL12 918 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 NRXN3Q9Y4C0 1643 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 GRXCR1A8MXD5 290 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 S1PR4O95977 384 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 SPARCP09486 303 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 EDNRBP24530 442 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 ENTPD1P49961 510 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 AIMP2Q13155 320 aaKnown RBP5.22□□□□□ -1.57
VPS13C-204ENST00000395898 GAS6Q14393 721 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 SPHARQ15513 63 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 LRIT3Q3SXY7 679 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 TREML1Q86YW5 311 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 OR5J2Q8NH18 312 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 OR52P1PQ8NH57 321 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 CHPT1Q8WUD6 406 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 SCRN2Q96FV2 425 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 DMRTB1Q96MA1 342 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 SGIP1Q9BQI5 828 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 IL23AQ9NPF7 189 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 C2orf42Q9NWW7 574 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 APOBEC3BQ9UH17 382 aaKnown RBP5.22□□□□□ -1.57
VPS13C-204ENST00000395898 C11orf98E9PRG8 122 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 ATG12O94817 140 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 PRKCAP17252 672 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 JUNDP17535 347 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 NDUFV2P19404 249 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 IST1P53990 364 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 PPP1R8Q12972 351 aaKnown RBP5.22□□□□□ -1.57
VPS13C-204ENST00000395898 RUNX3Q13761 415 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 SERTAD2Q14140 314 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 ACBD7Q8N6N7 88 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 SMARCD2Q92925 531 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 PGAP3Q96FM1 320 aaPredicted RBP5.22□□□□□ -1.57
VPS13C-204ENST00000395898 MUS81Q96NY9 551 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 SECISBP2Q96T21 854 aaKnown RBP5.22□□□□□ -1.57
VPS13C-204ENST00000395898 VRK1Q99986 396 aaPredicted RBP5.22□□□□□ -1.57
VPS13C-204ENST00000395898 DEFB126Q9BYW3 111 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 EPHA6Q9UF33 1036 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 NUFIP1Q9UHK0 495 aaKnown RBP5.22□□□□□ -1.57
VPS13C-204ENST00000395898 PCM1Q15154 2024 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 VNN2O95498 520 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 CD63P08962 238 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 ZNF806P0C7X5 589 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 ZNF182P17025 639 aaPredicted RBP5.22□□□□□ -1.57
VPS13C-204ENST00000395898 NPRL3Q12980 569 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 MOGSQ13724 837 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 CCINQ13939 588 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 EMC10Q5UCC4 262 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 KIAA0895LQ68EN5 471 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 OR52E8Q6IFG1 317 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 C14orf80Q86SX3 495 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 CPNE8Q86YQ8 564 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 TRUB1Q8WWH5 349 aaKnown RBP5.22□□□□□ -1.57
VPS13C-204ENST00000395898 CDCA3Q99618 268 aaPredicted RBP5.22□□□□□ -1.57
VPS13C-204ENST00000395898 PSAT1Q9Y617 370 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 FXYD6-FXYD2A0A087WZ82 144 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 H3BSA7 217 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 H7C417 338 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms