RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 OR5M9Q8NGP3 310 aa16.63■□□□□ 0.25
CXCL12-204ENST00000395793 REPS1Q96D71 796 aa16.63■□□□□ 0.25
CXCL12-204ENST00000395793 SPACA9Q96E40 222 aaPredicted RBP16.63■□□□□ 0.25
CXCL12-204ENST00000395793 PHF21BQ96EK2 531 aa16.63■□□□□ 0.25
CXCL12-204ENST00000395793 RBM18Q96H35 190 aaKnown RBP16.63■□□□□ 0.25
CXCL12-204ENST00000395793 SMC6Q96SB8 1091 aa16.63■□□□□ 0.25
CXCL12-204ENST00000395793 PAFAH2Q99487 392 aa16.63■□□□□ 0.25
CXCL12-204ENST00000395793 SPOCK3Q9BQ16 436 aa16.63■□□□□ 0.25
CXCL12-204ENST00000395793 PSD3Q9NYI0 1048 aa16.63■□□□□ 0.25
CXCL12-204ENST00000395793 NKX2-6A6NCS4 301 aa16.62■□□□□ 0.25
CXCL12-204ENST00000395793 PGRMC2O15173 223 aa16.62■□□□□ 0.25
CXCL12-204ENST00000395793 P04436 131 aa16.62■□□□□ 0.25
CXCL12-204ENST00000395793 INHBAP08476 426 aa16.62■□□□□ 0.25
CXCL12-204ENST00000395793 SBK3P0C264 359 aa16.62■□□□□ 0.25
CXCL12-204ENST00000395793 ENDOUP21128 410 aaKnown RBP16.62■□□□□ 0.25
CXCL12-204ENST00000395793 TLX1P31314 330 aaPredicted RBP16.62■□□□□ 0.25
CXCL12-204ENST00000395793 TFF3Q07654 80 aa16.62■□□□□ 0.25
CXCL12-204ENST00000395793 BIKQ13323 160 aa16.62■□□□□ 0.25
CXCL12-204ENST00000395793 GXYLT1Q4G148 440 aa16.62■□□□□ 0.25
CXCL12-204ENST00000395793 PRAMEF20Q5VT98 475 aa16.62■□□□□ 0.25
CXCL12-204ENST00000395793 METTL2BQ6P1Q9 378 aaKnown RBP16.62■□□□□ 0.25
CXCL12-204ENST00000395793 CYP20A1Q6UW02 462 aa16.62■□□□□ 0.25
CXCL12-204ENST00000395793 CCDC71Q8IV32 467 aaPredicted RBP16.62■□□□□ 0.25
CXCL12-204ENST00000395793 UHMK1Q8TAS1 419 aaKnown RBP16.62■□□□□ 0.25
CXCL12-204ENST00000395793 SLC22A8Q8TCC7 542 aa16.62■□□□□ 0.25
CXCL12-204ENST00000395793 PAQR8Q8TEZ7 354 aa16.62■□□□□ 0.25
CXCL12-204ENST00000395793 DCAKDQ8WVC6 231 aa16.62■□□□□ 0.25
CXCL12-204ENST00000395793 ART5Q96L15 291 aa16.62■□□□□ 0.25
CXCL12-204ENST00000395793 GAL3ST4Q96RP7 486 aa16.62■□□□□ 0.25
CXCL12-204ENST00000395793 NTMT1Q9BV86 223 aa16.62■□□□□ 0.25
CXCL12-204ENST00000395793 UCK2Q9BZX2 261 aa16.62■□□□□ 0.25
CXCL12-204ENST00000395793 WWTR1Q9GZV5 400 aa16.62■□□□□ 0.25
CXCL12-204ENST00000395793 NPDC1Q9NQX5 325 aaPredicted RBP16.62■□□□□ 0.25
CXCL12-204ENST00000395793 COQ3Q9NZJ6 369 aa16.62■□□□□ 0.25
CXCL12-204ENST00000395793 FAM215AQ9Y5M1 114 aa16.62■□□□□ 0.25
CXCL12-204ENST00000395793 ARHGAP21Q5T5U3 1957 aa16.62■□□□□ 0.25
CXCL12-204ENST00000395793 TACC2O95359 2948 aa16.61■□□□□ 0.25
CXCL12-204ENST00000395793 A0A1B0GVC2 190 aa16.61■□□□□ 0.25
CXCL12-204ENST00000395793 ATP6AP2A0A1C7CYW4 349 aa16.61■□□□□ 0.25
CXCL12-204ENST00000395793 LRRC3CA6NJW4 275 aa16.61■□□□□ 0.25
CXCL12-204ENST00000395793 FAM90A27PA6NNH2 459 aa16.61■□□□□ 0.25
CXCL12-204ENST00000395793 STX16-NPEPL1H3BU86 382 aa16.61■□□□□ 0.25
CXCL12-204ENST00000395793 PPP6CO00743 305 aa16.61■□□□□ 0.25
CXCL12-204ENST00000395793 STX16O14662 325 aa16.61■□□□□ 0.25
CXCL12-204ENST00000395793 OR10H2O60403 315 aa16.61■□□□□ 0.25
CXCL12-204ENST00000395793 ATP6AP2O75787 350 aa16.61■□□□□ 0.25
CXCL12-204ENST00000395793 SEMA3DO95025 777 aa16.61■□□□□ 0.25
CXCL12-204ENST00000395793 LRATO95237 230 aa16.61■□□□□ 0.25
CXCL12-204ENST00000395793 RPS17P08708 135 aaKnown RBP16.61■□□□□ 0.25
CXCL12-204ENST00000395793 CT62P0C5K7 136 aa16.61■□□□□ 0.25
CXCL12-204ENST00000395793 RFPL3SP0C7P2 107 aa16.61■□□□□ 0.25
CXCL12-204ENST00000395793 POU3F2P20265 443 aaPredicted RBP16.61■□□□□ 0.25
CXCL12-204ENST00000395793 ELAVL4P26378 380 aaKnown RBP16.61■□□□□ 0.25
CXCL12-204ENST00000395793 SSTR4P31391 388 aa16.61■□□□□ 0.25
CXCL12-204ENST00000395793 CCNG1P51959 295 aa16.61■□□□□ 0.25
CXCL12-204ENST00000395793 FRG2Q64ET8 278 aa16.61■□□□□ 0.25
CXCL12-204ENST00000395793 RTL6Q6ICC9 239 aa16.61■□□□□ 0.25
CXCL12-204ENST00000395793 TMEM211Q6ICI0 200 aa16.61■□□□□ 0.25
CXCL12-204ENST00000395793 PAOXQ6QHF9 649 aa16.61■□□□□ 0.25
CXCL12-204ENST00000395793 TMEM64Q6YI46 380 aa16.61■□□□□ 0.25
CXCL12-204ENST00000395793 MEX3BQ6ZN04 569 aaKnown RBP16.61■□□□□ 0.25
CXCL12-204ENST00000395793 RNF111Q6ZNA4 994 aa16.61■□□□□ 0.25
CXCL12-204ENST00000395793 ZNF441Q8N8Z8 693 aa16.61■□□□□ 0.25
CXCL12-204ENST00000395793 C7orf57Q8NEG2 295 aa16.61■□□□□ 0.25
CXCL12-204ENST00000395793 OR10G3Q8NGC4 313 aa16.61■□□□□ 0.25
CXCL12-204ENST00000395793 RIT1Q92963 219 aa16.61■□□□□ 0.25
CXCL12-204ENST00000395793 FRG2BQ96QU4 278 aa16.61■□□□□ 0.25
CXCL12-204ENST00000395793 PELOQ9BRX2 385 aaKnown RBP16.61■□□□□ 0.25
CXCL12-204ENST00000395793 MRPL1Q9BYD6 325 aaKnown RBP16.61■□□□□ 0.25
CXCL12-204ENST00000395793 ZNF703Q9H7S9 590 aaPredicted RBP16.61■□□□□ 0.25
CXCL12-204ENST00000395793 SPRR3Q9UBC9 169 aa16.61■□□□□ 0.25
CXCL12-204ENST00000395793 MTRF1LQ9UGC7 380 aaKnown RBP16.61■□□□□ 0.25
CXCL12-204ENST00000395793 CNOT11Q9UKZ1 510 aaKnown RBP16.61■□□□□ 0.25
CXCL12-204ENST00000395793 CHCHD2Q9Y6H1 151 aaPredicted RBP16.61■□□□□ 0.25
CXCL12-204ENST00000395793 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.61■□□□□ 0.25
CXCL12-204ENST00000395793 CCDC168Q8NDH2 2452 aa16.61■□□□□ 0.25
CXCL12-204ENST00000395793 TRIM49D1C9J1S8 452 aa16.6■□□□□ 0.25
CXCL12-204ENST00000395793 POC1B-GALNT4F8VUJ3 575 aa16.6■□□□□ 0.25
CXCL12-204ENST00000395793 DYRK3O43781 588 aa16.6■□□□□ 0.25
CXCL12-204ENST00000395793 TOXO94900 526 aa16.6■□□□□ 0.25
CXCL12-204ENST00000395793 RBP1P09455 135 aa16.6■□□□□ 0.25
CXCL12-204ENST00000395793 FBXO45P0C2W1 286 aa16.6■□□□□ 0.25
CXCL12-204ENST00000395793 IGFBP2P18065 325 aa16.6■□□□□ 0.25
CXCL12-204ENST00000395793 GALNSP34059 522 aa16.6■□□□□ 0.25
CXCL12-204ENST00000395793 ARL1P40616 181 aaPredicted RBP16.6■□□□□ 0.25
CXCL12-204ENST00000395793 PMPCAQ10713 525 aa16.6■□□□□ 0.25
CXCL12-204ENST00000395793 SLC22A10Q63ZE4 541 aa16.6■□□□□ 0.25
CXCL12-204ENST00000395793 OR52E8Q6IFG1 317 aa16.6■□□□□ 0.25
CXCL12-204ENST00000395793 FBXW8Q8N3Y1 598 aa16.6■□□□□ 0.25
CXCL12-204ENST00000395793 TMEM151AQ8N4L1 468 aa16.6■□□□□ 0.25
CXCL12-204ENST00000395793 SLC15A4Q8N697 577 aa16.6■□□□□ 0.25
CXCL12-204ENST00000395793 FAM13CQ8NE31 585 aa16.6■□□□□ 0.25
CXCL12-204ENST00000395793 OR4F6Q8NGB9 312 aa16.6■□□□□ 0.25
CXCL12-204ENST00000395793 LILRB4Q8NHJ6 448 aa16.6■□□□□ 0.25
CXCL12-204ENST00000395793 ASB5Q8WWX0 329 aa16.6■□□□□ 0.25
CXCL12-204ENST00000395793 IFT81Q8WYA0 676 aa16.6■□□□□ 0.25
CXCL12-204ENST00000395793 RND1Q92730 232 aa16.6■□□□□ 0.25
CXCL12-204ENST00000395793 ATP6V1E2Q96A05 226 aa16.6■□□□□ 0.25
CXCL12-204ENST00000395793 C14orf79Q96F83 325 aa16.6■□□□□ 0.25
CXCL12-204ENST00000395793 FMO2Q99518 471 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms