RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 PRODHO43272 600 aa10.76□□□□□ -0.69
RTN1-203ENST00000395090 PROM1O43490 865 aa10.76□□□□□ -0.69
RTN1-203ENST00000395090 LRP3O75074 770 aa10.76□□□□□ -0.69
RTN1-203ENST00000395090 ERN1O75460 977 aaKnown RBP10.76□□□□□ -0.69
RTN1-203ENST00000395090 GP1BAP07359 652 aa10.76□□□□□ -0.69
RTN1-203ENST00000395090 CD59P13987 128 aa10.76□□□□□ -0.69
RTN1-203ENST00000395090 ZNF10P21506 573 aaPredicted RBP10.76□□□□□ -0.69
RTN1-203ENST00000395090 SLC6A2P23975 617 aa10.76□□□□□ -0.69
RTN1-203ENST00000395090 ACP1P24666 158 aa10.76□□□□□ -0.69
RTN1-203ENST00000395090 PTPN6P29350 595 aa10.76□□□□□ -0.69
RTN1-203ENST00000395090 TRPC1P48995 793 aa10.76□□□□□ -0.69
RTN1-203ENST00000395090 PPM1FP49593 454 aaPredicted RBP10.76□□□□□ -0.69
RTN1-203ENST00000395090 LRRC74AQ0VAA2 488 aa10.76□□□□□ -0.69
RTN1-203ENST00000395090 NFYCQ13952 458 aa10.76□□□□□ -0.69
RTN1-203ENST00000395090 FAM53BQ14153 422 aa10.76□□□□□ -0.69
RTN1-203ENST00000395090 SF3A2Q15428 464 aaKnown RBP10.76□□□□□ -0.69
RTN1-203ENST00000395090 PRSS53Q2L4Q9 553 aa10.76□□□□□ -0.69
RTN1-203ENST00000395090 PIGGQ5H8A4 983 aa10.76□□□□□ -0.69
RTN1-203ENST00000395090 TCTE1Q5JU00 501 aa10.76□□□□□ -0.69
RTN1-203ENST00000395090 ANXA8L1Q5VT79 327 aa10.76□□□□□ -0.69
RTN1-203ENST00000395090 GARNL3Q5VVW2 1013 aa10.76□□□□□ -0.69
RTN1-203ENST00000395090 OR4F3Q6IEY1 312 aa10.76□□□□□ -0.69
RTN1-203ENST00000395090 PRMT9Q6P2P2 845 aa10.76□□□□□ -0.69
RTN1-203ENST00000395090 SCUBE1Q8IWY4 988 aa10.76□□□□□ -0.69
RTN1-203ENST00000395090 KIAA2013Q8IYS2 634 aa10.76□□□□□ -0.69
RTN1-203ENST00000395090 ULK2Q8IYT8 1036 aa10.76□□□□□ -0.69
RTN1-203ENST00000395090 FBXW8Q8N3Y1 598 aa10.76□□□□□ -0.69
RTN1-203ENST00000395090 NATD1Q8N6N6 113 aa10.76□□□□□ -0.69
RTN1-203ENST00000395090 VPS37AQ8NEZ2 397 aa10.76□□□□□ -0.69
RTN1-203ENST00000395090 IFI44Q8TCB0 444 aa10.76□□□□□ -0.69
RTN1-203ENST00000395090 ITCHQ96J02 903 aa10.76□□□□□ -0.69
RTN1-203ENST00000395090 CCDC140Q96MF4 163 aa10.76□□□□□ -0.69
RTN1-203ENST00000395090 CDRT15Q96T59 188 aa10.76□□□□□ -0.69
RTN1-203ENST00000395090 PAIP1Q9H074 479 aaKnown RBP10.76□□□□□ -0.69
RTN1-203ENST00000395090 RMND5AQ9H871 391 aa10.76□□□□□ -0.69
RTN1-203ENST00000395090 ATAD3AQ9NVI7 634 aa10.76□□□□□ -0.69
RTN1-203ENST00000395090 SH3BP4Q9P0V3 963 aa10.76□□□□□ -0.69
RTN1-203ENST00000395090 ABCD2Q9UBJ2 740 aa10.76□□□□□ -0.69
RTN1-203ENST00000395090 BTNL2Q9UIR0 455 aa10.76□□□□□ -0.69
RTN1-203ENST00000395090 TCFL5Q9UL49 500 aa10.76□□□□□ -0.69
RTN1-203ENST00000395090 MRPS2Q9Y399 296 aaKnown RBP10.76□□□□□ -0.69
RTN1-203ENST00000395090 GMEB1Q9Y692 573 aa10.76□□□□□ -0.69
RTN1-203ENST00000395090 DMDP11532 3685 aa10.75□□□□□ -0.69
RTN1-203ENST00000395090 A0A096LPI6 279 aa10.75□□□□□ -0.69
RTN1-203ENST00000395090 TRBV5-3A0A0A0MS03 114 aa10.75□□□□□ -0.69
RTN1-203ENST00000395090 TRBV23-1A0A0A0MS06 115 aa10.75□□□□□ -0.69
RTN1-203ENST00000395090 NTN3O00634 580 aaPredicted RBP10.75□□□□□ -0.69
RTN1-203ENST00000395090 GALR3O60755 368 aaPredicted RBP10.75□□□□□ -0.69
RTN1-203ENST00000395090 LDOC1O95751 146 aaPredicted RBP10.75□□□□□ -0.69
RTN1-203ENST00000395090 RPLP0P05388 317 aaKnown RBP10.75□□□□□ -0.69
RTN1-203ENST00000395090 HOXB9P17482 250 aaPredicted RBP10.75□□□□□ -0.69
RTN1-203ENST00000395090 CERS1P27544 350 aa10.75□□□□□ -0.69
RTN1-203ENST00000395090 HOXC12P31275 282 aa10.75□□□□□ -0.69
RTN1-203ENST00000395090 FRKP42685 505 aaPredicted RBP10.75□□□□□ -0.69
RTN1-203ENST00000395090 MPEG1Q2M385 716 aa10.75□□□□□ -0.69
RTN1-203ENST00000395090 DEFB110Q30KQ9 67 aa10.75□□□□□ -0.69
RTN1-203ENST00000395090 SPATS1Q496A3 300 aa10.75□□□□□ -0.69
RTN1-203ENST00000395090 DEFB134Q4QY38 66 aa10.75□□□□□ -0.69
RTN1-203ENST00000395090 ZNF385BQ569K4 471 aa10.75□□□□□ -0.69
RTN1-203ENST00000395090 FAM209AQ5JX71 171 aa10.75□□□□□ -0.69
RTN1-203ENST00000395090 NDUFAF5Q5TEU4 345 aa10.75□□□□□ -0.69
RTN1-203ENST00000395090 ANKRD26P1Q6NSI1 321 aa10.75□□□□□ -0.69
RTN1-203ENST00000395090 NANOGP8Q6NSW7 305 aa10.75□□□□□ -0.69
RTN1-203ENST00000395090 PDSS2Q86YH6 399 aa10.75□□□□□ -0.69
RTN1-203ENST00000395090 SLC15A3Q8IY34 581 aa10.75□□□□□ -0.69
RTN1-203ENST00000395090 MMP21Q8N119 569 aa10.75□□□□□ -0.69
RTN1-203ENST00000395090 FAM47BQ8NA70 645 aa10.75□□□□□ -0.69
RTN1-203ENST00000395090 GOT1L1Q8NHS2 421 aaPredicted RBP10.75□□□□□ -0.69
RTN1-203ENST00000395090 CDC26Q8NHZ8 85 aa10.75□□□□□ -0.69
RTN1-203ENST00000395090 PPCDCQ96CD2 204 aa10.75□□□□□ -0.69
RTN1-203ENST00000395090 CLPTM1LQ96KA5 538 aa10.75□□□□□ -0.69
RTN1-203ENST00000395090 CCDC115Q96NT0 180 aa10.75□□□□□ -0.69
RTN1-203ENST00000395090 CGREF1Q99674 301 aa10.75□□□□□ -0.69
RTN1-203ENST00000395090 SLC39A3Q9BRY0 314 aa10.75□□□□□ -0.69
RTN1-203ENST00000395090 FAIM2Q9BWQ8 316 aa10.75□□□□□ -0.69
RTN1-203ENST00000395090 NPLQ9BXD5 320 aaPredicted RBP10.75□□□□□ -0.69
RTN1-203ENST00000395090 IRF2BPLQ9H1B7 796 aa10.75□□□□□ -0.69
RTN1-203ENST00000395090 NANOGQ9H9S0 305 aa10.75□□□□□ -0.69
RTN1-203ENST00000395090 LYRM4Q9HD34 91 aa10.75□□□□□ -0.69
RTN1-203ENST00000395090 SPAG4Q9NPE6 437 aa10.75□□□□□ -0.69
RTN1-203ENST00000395090 STARD5Q9NSY2 213 aa10.75□□□□□ -0.69
RTN1-203ENST00000395090 SOHLH2Q9NX45 425 aa10.75□□□□□ -0.69
RTN1-203ENST00000395090 LYARQ9NX58 379 aaKnown RBP10.75□□□□□ -0.69
RTN1-203ENST00000395090 TEX10Q9NXF1 929 aaPredicted RBP10.75□□□□□ -0.69
RTN1-203ENST00000395090 CD300AQ9UGN4 299 aa10.75□□□□□ -0.69
RTN1-203ENST00000395090 SLC7A8Q9UHI5 535 aa10.75□□□□□ -0.69
RTN1-203ENST00000395090 DAPP1Q9UN19 280 aa10.75□□□□□ -0.69
RTN1-203ENST00000395090 ATG4BQ9Y4P1 393 aa10.75□□□□□ -0.69
RTN1-203ENST00000395090 NEUROG3Q9Y4Z2 214 aa10.75□□□□□ -0.69
RTN1-203ENST00000395090 PCDHA9Q9Y5H5 950 aa10.75□□□□□ -0.69
RTN1-203ENST00000395090 COL5A1P20908 1838 aaPredicted RBP10.74□□□□□ -0.69
RTN1-203ENST00000395090 IGHV5-10-1A0A0J9YXX1 117 aa10.74□□□□□ -0.69
RTN1-203ENST00000395090 HYKKA2RU49 373 aa10.74□□□□□ -0.69
RTN1-203ENST00000395090 B3GALT2O43825 422 aa10.74□□□□□ -0.69
RTN1-203ENST00000395090 CBFA2T3O75081 653 aa10.74□□□□□ -0.69
RTN1-203ENST00000395090 ZCCHC18P0CG32 403 aa10.74□□□□□ -0.69
RTN1-203ENST00000395090 FOLR1P15328 257 aa10.74□□□□□ -0.69
RTN1-203ENST00000395090 DDX5P17844 614 aaKnown RBP10.74□□□□□ -0.69
RTN1-203ENST00000395090 TGM1P22735 817 aa10.74□□□□□ -0.69
RTN1-203ENST00000395090 NBL1P41271 181 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms