RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 NELL2Q99435 816 aa12.59□□□□□ -0.39
NFKB1-202ENST00000394820 PIKFYVEQ9Y2I7 2098 aa12.59□□□□□ -0.39
NFKB1-202ENST00000394820 ACVR1BP36896 505 aa12.59□□□□□ -0.39
NFKB1-202ENST00000394820 POLR2LP62875 67 aaKnown RBP12.59□□□□□ -0.39
NFKB1-202ENST00000394820 KEAP1Q14145 624 aa12.59□□□□□ -0.39
NFKB1-202ENST00000394820 INSL4Q14641 139 aa12.59□□□□□ -0.39
NFKB1-202ENST00000394820 SLC30A6Q6NXT4 461 aa12.59□□□□□ -0.39
NFKB1-202ENST00000394820 LYPD8Q6UX82 237 aa12.59□□□□□ -0.39
NFKB1-202ENST00000394820 CBLL1Q75N03 491 aa12.59□□□□□ -0.39
NFKB1-202ENST00000394820 SAMD12Q8N8I0 201 aa12.59□□□□□ -0.39
NFKB1-202ENST00000394820 GRPEL2Q8TAA5 225 aa12.59□□□□□ -0.39
NFKB1-202ENST00000394820 YIPF6Q96EC8 236 aa12.59□□□□□ -0.39
NFKB1-202ENST00000394820 ZSCAN5AQ9BUG6 496 aa12.59□□□□□ -0.39
NFKB1-202ENST00000394820 GALNT9Q9HCQ5 603 aa12.59□□□□□ -0.39
NFKB1-202ENST00000394820 EXTL2Q9UBQ6 330 aa12.59□□□□□ -0.39
NFKB1-202ENST00000394820 RPL36Q9Y3U8 105 aaKnown RBP12.59□□□□□ -0.39
NFKB1-202ENST00000394820 C8GP07360 202 aa12.59□□□□□ -0.39
NFKB1-202ENST00000394820 CHRNB1P11230 501 aa12.59□□□□□ -0.39
NFKB1-202ENST00000394820 TYRP14679 529 aa12.59□□□□□ -0.39
NFKB1-202ENST00000394820 POLR2EP19388 210 aaKnown RBP12.59□□□□□ -0.39
NFKB1-202ENST00000394820 AOAHP28039 575 aa12.59□□□□□ -0.39
NFKB1-202ENST00000394820 CTBP2P56545 445 aa12.59□□□□□ -0.39
NFKB1-202ENST00000394820 RAB33AQ14088 237 aa12.59□□□□□ -0.39
NFKB1-202ENST00000394820 MICAQ29983 383 aa12.59□□□□□ -0.39
NFKB1-202ENST00000394820 ZNF613Q6PF04 617 aa12.59□□□□□ -0.39
NFKB1-202ENST00000394820 SLC39A5Q6ZMH5 540 aa12.59□□□□□ -0.39
NFKB1-202ENST00000394820 RFPL4BQ6ZWI9 263 aa12.59□□□□□ -0.39
NFKB1-202ENST00000394820 PDZD3Q86UT5 571 aa12.59□□□□□ -0.39
NFKB1-202ENST00000394820 KLBQ86Z14 1044 aa12.59□□□□□ -0.39
NFKB1-202ENST00000394820 CCDC71Q8IV32 467 aaPredicted RBP12.59□□□□□ -0.39
NFKB1-202ENST00000394820 CHPFQ8IZ52 775 aa12.59□□□□□ -0.39
NFKB1-202ENST00000394820 NEIL3Q8TAT5 605 aa12.59□□□□□ -0.39
NFKB1-202ENST00000394820 CLIP3Q96DZ5 547 aa12.59□□□□□ -0.39
NFKB1-202ENST00000394820 VMP1Q96GC9 406 aa12.59□□□□□ -0.39
NFKB1-202ENST00000394820 PIP5K1AQ99755 562 aa12.59□□□□□ -0.39
NFKB1-202ENST00000394820 MAGIXQ9H6Y5 334 aa12.59□□□□□ -0.39
NFKB1-202ENST00000394820 ING4Q9UNL4 249 aa12.59□□□□□ -0.39
NFKB1-202ENST00000394820 RTTNQ86VV8 2226 aa12.59□□□□□ -0.39
NFKB1-202ENST00000394820 SNTNA6NMZ2 147 aa12.58□□□□□ -0.4
NFKB1-202ENST00000394820 ANHXE9PGG2 379 aa12.58□□□□□ -0.4
NFKB1-202ENST00000394820 ATG13O75143 517 aa12.58□□□□□ -0.4
NFKB1-202ENST00000394820 SAGP10523 405 aaPredicted RBP12.58□□□□□ -0.4
NFKB1-202ENST00000394820 PPIBP23284 216 aaKnown RBP12.58□□□□□ -0.4
NFKB1-202ENST00000394820 HOXA9P31269 272 aa12.58□□□□□ -0.4
NFKB1-202ENST00000394820 MAP2K3P46734 347 aa12.58□□□□□ -0.4
NFKB1-202ENST00000394820 CNIH2Q6PI25 160 aa12.58□□□□□ -0.4
NFKB1-202ENST00000394820 BRAT1Q6PJG6 821 aa12.58□□□□□ -0.4
NFKB1-202ENST00000394820 FAM129CQ86XR2 697 aa12.58□□□□□ -0.4
NFKB1-202ENST00000394820 SLC38A2Q96QD8 506 aa12.58□□□□□ -0.4
NFKB1-202ENST00000394820 ZNF607Q96SK3 696 aa12.58□□□□□ -0.4
NFKB1-202ENST00000394820 CERS4Q9HA82 394 aa12.58□□□□□ -0.4
NFKB1-202ENST00000394820 ARHGEF33A8MVX0 844 aa12.58□□□□□ -0.4
NFKB1-202ENST00000394820 LEFTY1O75610 366 aa12.58□□□□□ -0.4
NFKB1-202ENST00000394820 REM1O75628 298 aa12.58□□□□□ -0.4
NFKB1-202ENST00000394820 ITGAMP11215 1152 aa12.58□□□□□ -0.4
NFKB1-202ENST00000394820 GPR4P46093 362 aa12.58□□□□□ -0.4
NFKB1-202ENST00000394820 SPATS1Q496A3 300 aa12.58□□□□□ -0.4
NFKB1-202ENST00000394820 FBXO43Q4G163 708 aa12.58□□□□□ -0.4
NFKB1-202ENST00000394820 RNF44Q7L0R7 432 aa12.58□□□□□ -0.4
NFKB1-202ENST00000394820 CCDC116Q8IYX3 515 aa12.58□□□□□ -0.4
NFKB1-202ENST00000394820 ASB15Q8WXK1 588 aa12.58□□□□□ -0.4
NFKB1-202ENST00000394820 UFD1Q92890 307 aa12.58□□□□□ -0.4
NFKB1-202ENST00000394820 TMEM19Q96HH6 336 aa12.58□□□□□ -0.4
NFKB1-202ENST00000394820 PAWRQ96IZ0 340 aaKnown RBP12.58□□□□□ -0.4
NFKB1-202ENST00000394820 IL21Q9HBE4 155 aa12.58□□□□□ -0.4
NFKB1-202ENST00000394820 NDRG4Q9ULP0 352 aaKnown RBP12.58□□□□□ -0.4
NFKB1-202ENST00000394820 CSNK1G3Q9Y6M4 447 aa12.58□□□□□ -0.4
NFKB1-202ENST00000394820 DSCR3O14972 297 aa12.58□□□□□ -0.4
NFKB1-202ENST00000394820 ORC5O43913 435 aa12.58□□□□□ -0.4
NFKB1-202ENST00000394820 PRKRAO75569 313 aaKnown RBP12.58□□□□□ -0.4
NFKB1-202ENST00000394820 ZFP36L2P47974 494 aaKnown RBP12.58□□□□□ -0.4
NFKB1-202ENST00000394820 NRIP1P48552 1158 aa12.58□□□□□ -0.4
NFKB1-202ENST00000394820 DGKGP49619 791 aa12.58□□□□□ -0.4
NFKB1-202ENST00000394820 ITGA1P56199 1179 aa12.58□□□□□ -0.4
NFKB1-202ENST00000394820 RGS8P57771 180 aaPredicted RBP12.58□□□□□ -0.4
NFKB1-202ENST00000394820 MTAPQ13126 283 aa12.58□□□□□ -0.4
NFKB1-202ENST00000394820 PLAG1Q6DJT9 500 aa12.58□□□□□ -0.4
NFKB1-202ENST00000394820 OR4F15Q8NGB8 312 aa12.58□□□□□ -0.4
NFKB1-202ENST00000394820 ZNF431Q8TF32 576 aaPredicted RBP12.58□□□□□ -0.4
NFKB1-202ENST00000394820 OVCA2Q8WZ82 227 aa12.58□□□□□ -0.4
NFKB1-202ENST00000394820 REPS1Q96D71 796 aa12.58□□□□□ -0.4
NFKB1-202ENST00000394820 C17orf62Q9BQA9 187 aa12.58□□□□□ -0.4
NFKB1-202ENST00000394820 SAP130Q9H0E3 1048 aa12.58□□□□□ -0.4
NFKB1-202ENST00000394820 ABCG5Q9H222 651 aa12.58□□□□□ -0.4
NFKB1-202ENST00000394820 AHSPQ9NZD4 102 aa12.58□□□□□ -0.4
NFKB1-202ENST00000394820 MAPRE3Q9UPY8 281 aa12.58□□□□□ -0.4
NFKB1-202ENST00000394820 CORO2BQ9UQ03 480 aa12.58□□□□□ -0.4
NFKB1-202ENST00000394820 HCFC2Q9Y5Z7 792 aa12.58□□□□□ -0.4
NFKB1-202ENST00000394820 HIDE1A8MVS5 230 aa12.57□□□□□ -0.4
NFKB1-202ENST00000394820 GAPDHSO14556 408 aaPredicted RBP12.57□□□□□ -0.4
NFKB1-202ENST00000394820 SCAMP2O15127 329 aaKnown RBP12.57□□□□□ -0.4
NFKB1-202ENST00000394820 PGRMC2O15173 223 aa12.57□□□□□ -0.4
NFKB1-202ENST00000394820 RB1P06400 928 aa12.57□□□□□ -0.4
NFKB1-202ENST00000394820 JUPP14923 745 aa12.57□□□□□ -0.4
NFKB1-202ENST00000394820 CDH11P55287 796 aa12.57□□□□□ -0.4
NFKB1-202ENST00000394820 GPR33Q49SQ1 333 aa12.57□□□□□ -0.4
NFKB1-202ENST00000394820 LRRC70Q7Z2Q7 622 aa12.57□□□□□ -0.4
NFKB1-202ENST00000394820 SMAP2Q8WU79 429 aaPredicted RBP12.57□□□□□ -0.4
NFKB1-202ENST00000394820 CRELD1Q96HD1 420 aa12.57□□□□□ -0.4
NFKB1-202ENST00000394820 MYO15AQ9UKN7 3530 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms