RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 BEX1Q9HBH7 125 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 VPS29Q9UBQ0 182 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 CLEC4AQ9UMR7 237 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 SCML1Q9UN30 329 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 PCDHGB2Q9Y5G2 931 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 CASP8AP2Q9UKL3 1982 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 AKR7A2O43488 359 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 OR1F1O43749 312 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 OLFM2O95897 454 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 CLEC2LP0C7M8 214 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 LAMP2P13473 410 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 POU2F1P14859 743 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 AQP1P29972 269 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 SSTR2P30874 369 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 POLR2IP36954 125 aaKnown RBP5.43□□□□□ -1.54
RFFL-202ENST00000394597 CRATP43155 626 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 SLC16A1P53985 500 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 HMGCS1Q01581 520 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 ZNF33BQ06732 778 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 ST3GAL4Q11206 333 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 HNRNPA0Q13151 305 aaKnown RBP5.43□□□□□ -1.54
RFFL-202ENST00000394597 GRIN2CQ14957 1233 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 PTPRRQ15256 657 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 HKDC1Q2TB90 917 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 PRAMEF14Q5SWL7 426 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 PRAMEF13Q5VWM6 474 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 OR2T5Q6IEZ7 315 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 LYPD8Q6UX82 237 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 CHRDL2Q6WN34 429 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 IZUMO1Q8IYV9 350 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 SAMD14Q8IZD0 417 aaPredicted RBP5.43□□□□□ -1.54
RFFL-202ENST00000394597 TDHQ8IZJ6 230 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 OXR1Q8N573 874 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 OR2T29Q8NH02 315 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 CEP76Q8TAP6 659 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 SGCDQ92629 289 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 ARL5BQ96KC2 179 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 DPEP2Q9H4A9 486 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 PRMT8Q9NR22 394 aaPredicted RBP5.43□□□□□ -1.54
RFFL-202ENST00000394597 ZIM2Q9NZV7 527 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 MARK1Q9P0L2 795 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 GMEB2Q9UKD1 530 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 TRAV20A0A0B4J274 112 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 LRRC14BA6NHZ5 514 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 WASH3PC4AMC7 463 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 SMLR1H3BR10 107 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 MITFO75030 526 aaPredicted RBP5.43□□□□□ -1.54
RFFL-202ENST00000394597 CDK1P06493 297 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 HTR1EP28566 365 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 TGFBR2P37173 567 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 SSR2P43308 183 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 TNFRSF4P43489 277 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 CCR8P51685 355 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 DIO3P55073 304 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 UFM1P61960 85 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 EMX2Q04743 252 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 SRSF11Q05519 484 aaKnown RBP5.43□□□□□ -1.54
RFFL-202ENST00000394597 CAMK1Q14012 370 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 SPATS1Q496A3 300 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 ALG1LQ6GMV1 187 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 KIAA1161Q6NSJ0 714 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 CLEC14AQ86T13 490 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 DCUN1D3Q8IWE4 304 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 FTMTQ8N4E7 242 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 ZNF671Q8TAW3 534 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 RBPMSQ93062 196 aaKnown RBP5.43□□□□□ -1.54
RFFL-202ENST00000394597 NEDD4LQ96PU5 975 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 SLC17A9Q9BYT1 436 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 SRMSQ9H3Y6 488 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 ACOT13Q9NPJ3 140 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 BIN3Q9NQY0 253 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 TAS2R3Q9NYW6 316 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 TNFRSF10DQ9UBN6 386 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 TRPS1Q9UHF7 1281 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 TCRBV21S2A2A0A5A6 115 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 HMX2A2RU54 273 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 METTL15A6NJ78 407 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 CLDN24A6NM45 220 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 TNFRSF11BO00300 401 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 PGRMC2O15173 223 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 SUV39H1O43463 412 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 STX11O75558 287 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 STSP08842 583 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 INHBBP09529 407 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 C1SP09871 688 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 EPORP19235 508 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 DNAJA1P31689 397 aaKnown RBP5.43□□□□□ -1.54
RFFL-202ENST00000394597 FEN1P39748 380 aaKnown RBP5.43□□□□□ -1.54
RFFL-202ENST00000394597 ATP4BP51164 291 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 ERVK-25P63136 954 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 PTSQ03393 145 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 ACVR1Q04771 509 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 C19orf57Q0VDD7 668 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 SLBPQ14493 270 aaKnown RBP eCLIP5.43□□□□□ -1.54
RFFL-202ENST00000394597 C10orf62Q5T681 223 aaPredicted RBP5.43□□□□□ -1.54
RFFL-202ENST00000394597 ZNF782Q6ZMW2 699 aaPredicted RBP5.43□□□□□ -1.54
RFFL-202ENST00000394597 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.43□□□□□ -1.54
RFFL-202ENST00000394597 ZNF614Q8N883 585 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 DYNC2LI1Q8TCX1 351 aa5.43□□□□□ -1.54
RFFL-202ENST00000394597 GPR151Q8TDV0 419 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 400.7 ms