RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 RIBC1Q8N443 379 aaPredicted RBP28.49■■■□□ 2.15
CMTM4-202ENST00000394106 GBP7Q8N8V2 638 aaPredicted RBP28.49■■■□□ 2.15
CMTM4-202ENST00000394106 CHTF18Q8WVB6 975 aa28.49■■■□□ 2.15
CMTM4-202ENST00000394106 IQCGQ9H095 443 aaKnown RBP28.49■■■□□ 2.15
CMTM4-202ENST00000394106 SDAD1Q9NVU7 687 aaKnown RBP eCLIP28.49■■■□□ 2.15
CMTM4-202ENST00000394106 OXSMQ9NWU1 459 aa28.49■■■□□ 2.15
CMTM4-202ENST00000394106 PCDHA9Q9Y5H5 950 aa28.49■■■□□ 2.15
CMTM4-202ENST00000394106 CYSRT1A8MQ03 144 aa28.48■■■□□ 2.15
CMTM4-202ENST00000394106 KLRC4-KLRK1H3BQV0 150 aa28.48■■■□□ 2.15
CMTM4-202ENST00000394106 PEX1O43933 1283 aa28.48■■■□□ 2.15
CMTM4-202ENST00000394106 STSP08842 583 aa28.48■■■□□ 2.15
CMTM4-202ENST00000394106 ZNF24P17028 368 aa28.48■■■□□ 2.15
CMTM4-202ENST00000394106 RFC3P40938 356 aa28.48■■■□□ 2.15
CMTM4-202ENST00000394106 XKP51811 444 aa28.48■■■□□ 2.15
CMTM4-202ENST00000394106 DNAJB13P59910 316 aa28.48■■■□□ 2.15
CMTM4-202ENST00000394106 HMGCS1Q01581 520 aa28.48■■■□□ 2.15
CMTM4-202ENST00000394106 ERCC6LQ2NKX8 1250 aa28.48■■■□□ 2.15
CMTM4-202ENST00000394106 RNF111Q6ZNA4 994 aa28.48■■■□□ 2.15
CMTM4-202ENST00000394106 CAVIN3Q969G5 261 aa28.48■■■□□ 2.15
CMTM4-202ENST00000394106 TM4SF18Q96CE8 201 aa28.48■■■□□ 2.15
CMTM4-202ENST00000394106 GPR137Q96N19 417 aa28.48■■■□□ 2.15
CMTM4-202ENST00000394106 GAL3ST4Q96RP7 486 aa28.48■■■□□ 2.15
CMTM4-202ENST00000394106 C1orf226A1L170 272 aa28.47■■■□□ 2.15
CMTM4-202ENST00000394106 ZNF354AO60765 605 aaPredicted RBP28.47■■■□□ 2.15
CMTM4-202ENST00000394106 CRCPO75575 148 aa28.47■■■□□ 2.15
CMTM4-202ENST00000394106 GALNSP34059 522 aa28.47■■■□□ 2.15
CMTM4-202ENST00000394106 DEKP35659 375 aaKnown RBP28.47■■■□□ 2.15
CMTM4-202ENST00000394106 FOXA1P55317 472 aa28.47■■■□□ 2.15
CMTM4-202ENST00000394106 NAA20P61599 178 aa28.47■■■□□ 2.15
CMTM4-202ENST00000394106 RBPJQ06330 500 aa28.47■■■□□ 2.15
CMTM4-202ENST00000394106 ZNF750Q32MQ0 723 aa28.47■■■□□ 2.15
CMTM4-202ENST00000394106 RNFT1Q5M7Z0 435 aa28.47■■■□□ 2.15
CMTM4-202ENST00000394106 TRABD2AQ86V40 505 aa28.47■■■□□ 2.15
CMTM4-202ENST00000394106 FJX1Q86VR8 437 aa28.47■■■□□ 2.15
CMTM4-202ENST00000394106 PSD4Q8NDX1 1056 aa28.47■■■□□ 2.15
CMTM4-202ENST00000394106 NUBPLQ8TB37 319 aa28.47■■■□□ 2.15
CMTM4-202ENST00000394106 APOPT1Q96IL0 206 aa28.47■■■□□ 2.15
CMTM4-202ENST00000394106 MID2Q9UJV3 735 aa28.47■■■□□ 2.15
CMTM4-202ENST00000394106 A1L4Q6 167 aa28.46■■■□□ 2.15
CMTM4-202ENST00000394106 CPMP14384 443 aa28.46■■■□□ 2.15
CMTM4-202ENST00000394106 ALDH9A1P49189 494 aa28.46■■■□□ 2.15
CMTM4-202ENST00000394106 BTKQ06187 659 aa28.46■■■□□ 2.15
CMTM4-202ENST00000394106 SLC48A1Q6P1K1 146 aa28.46■■■□□ 2.15
CMTM4-202ENST00000394106 OPN5Q6U736 354 aa28.46■■■□□ 2.15
CMTM4-202ENST00000394106 SLC29A4Q7RTT9 530 aa28.46■■■□□ 2.15
CMTM4-202ENST00000394106 GALNT12Q8IXK2 581 aa28.46■■■□□ 2.15
CMTM4-202ENST00000394106 SRRM1Q8IYB3 904 aaKnown RBP28.46■■■□□ 2.15
CMTM4-202ENST00000394106 FAIM2Q9BWQ8 316 aa28.46■■■□□ 2.15
CMTM4-202ENST00000394106 SHCBP1LQ9BZQ2 653 aa28.46■■■□□ 2.15
CMTM4-202ENST00000394106 CXorf21Q9HAI6 301 aa28.46■■■□□ 2.15
CMTM4-202ENST00000394106 LGALS13Q9UHV8 139 aa28.46■■■□□ 2.15
CMTM4-202ENST00000394106 MCM8Q9UJA3 840 aa28.46■■■□□ 2.15
CMTM4-202ENST00000394106 TRGV8A0A0C4DH27 118 aa28.45■■■□□ 2.14
CMTM4-202ENST00000394106 PCDH7O60245 1069 aa28.45■■■□□ 2.14
CMTM4-202ENST00000394106 ERAL1O75616 437 aaKnown RBP28.45■■■□□ 2.14
CMTM4-202ENST00000394106 GP1BBP13224 206 aa28.45■■■□□ 2.14
CMTM4-202ENST00000394106 NT5EP21589 574 aa28.45■■■□□ 2.14
CMTM4-202ENST00000394106 SLC37A1P57057 533 aa28.45■■■□□ 2.14
CMTM4-202ENST00000394106 TRA2BP62995 288 aaKnown RBP28.45■■■□□ 2.14
CMTM4-202ENST00000394106 ACSM2AQ08AH3 577 aa28.45■■■□□ 2.14
CMTM4-202ENST00000394106 MPEG1Q2M385 716 aa28.45■■■□□ 2.14
CMTM4-202ENST00000394106 KRTCAP3Q53RY4 240 aa28.45■■■□□ 2.14
CMTM4-202ENST00000394106 SPIN4Q56A73 249 aa28.45■■■□□ 2.14
CMTM4-202ENST00000394106 PIGGQ5H8A4 983 aa28.45■■■□□ 2.14
CMTM4-202ENST00000394106 C6orf163Q5TEZ5 329 aa28.45■■■□□ 2.14
CMTM4-202ENST00000394106 LIPMQ5VYY2 423 aa28.45■■■□□ 2.14
CMTM4-202ENST00000394106 ACSM2BQ68CK6 577 aa28.45■■■□□ 2.14
CMTM4-202ENST00000394106 C10orf107Q8IVU9 208 aa28.45■■■□□ 2.14
CMTM4-202ENST00000394106 SIAH3Q8IW03 269 aa28.45■■■□□ 2.14
CMTM4-202ENST00000394106 POGLUT1Q8NBL1 392 aa28.45■■■□□ 2.14
CMTM4-202ENST00000394106 APIPQ96GX9 242 aa28.45■■■□□ 2.14
CMTM4-202ENST00000394106 PARD6BQ9BYG5 372 aa28.45■■■□□ 2.14
CMTM4-202ENST00000394106 ROPN1BQ9BZX4 212 aaPredicted RBP28.45■■■□□ 2.14
CMTM4-202ENST00000394106 ROPN1Q9HAT0 212 aaPredicted RBP28.45■■■□□ 2.14
CMTM4-202ENST00000394106 SH3BGRL2Q9UJC5 107 aa28.45■■■□□ 2.14
CMTM4-202ENST00000394106 CES1P1Q9UKY3 287 aa28.45■■■□□ 2.14
CMTM4-202ENST00000394106 PLLPQ9Y342 182 aa28.45■■■□□ 2.14
CMTM4-202ENST00000394106 USP9YO00507 2555 aaPredicted RBP28.44■■■□□ 2.14
CMTM4-202ENST00000394106 A0A1B0GUH1 482 aa28.44■■■□□ 2.14
CMTM4-202ENST00000394106 GNG14A0A1W2PPG7 69 aa28.44■■■□□ 2.14
CMTM4-202ENST00000394106 WIPF3A6NGB9 483 aa28.44■■■□□ 2.14
CMTM4-202ENST00000394106 GOLGA6L10A6NI86 522 aa28.44■■■□□ 2.14
CMTM4-202ENST00000394106 PORP16435 677 aaPredicted RBP28.44■■■□□ 2.14
CMTM4-202ENST00000394106 SSTR4P31391 388 aa28.44■■■□□ 2.14
CMTM4-202ENST00000394106 PER3P56645 1201 aa28.44■■■□□ 2.14
CMTM4-202ENST00000394106 SPDYAQ5MJ70 313 aa28.44■■■□□ 2.14
CMTM4-202ENST00000394106 RTL4Q6ZR62 310 aa28.44■■■□□ 2.14
CMTM4-202ENST00000394106 BANPQ8N9N5 519 aa28.44■■■□□ 2.14
CMTM4-202ENST00000394106 SLC22A8Q8TCC7 542 aa28.44■■■□□ 2.14
CMTM4-202ENST00000394106 KLHL29Q96CT2 875 aa28.44■■■□□ 2.14
CMTM4-202ENST00000394106 DEPPQ9NTK1 212 aa28.44■■■□□ 2.14
CMTM4-202ENST00000394106 MKS1Q9NXB0 559 aa28.44■■■□□ 2.14
CMTM4-202ENST00000394106 G3V3Y1 287 aa28.43■■■□□ 2.14
CMTM4-202ENST00000394106 TFECO14948 347 aaPredicted RBP28.43■■■□□ 2.14
CMTM4-202ENST00000394106 ASNA1O43681 348 aa28.43■■■□□ 2.14
CMTM4-202ENST00000394106 CLPSP04118 112 aa28.43■■■□□ 2.14
CMTM4-202ENST00000394106 CT62P0C5K7 136 aa28.43■■■□□ 2.14
CMTM4-202ENST00000394106 SERPINB3P29508 390 aa28.43■■■□□ 2.14
CMTM4-202ENST00000394106 FEN1P39748 380 aaKnown RBP28.43■■■□□ 2.14
CMTM4-202ENST00000394106 RAE1P78406 368 aaKnown RBP28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms