RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 PSPHP78330 225 aa17.86■□□□□ 0.45
CBX1-202ENST00000393408 TARDBPQ13148 414 aaKnown RBP eCLIP17.86■□□□□ 0.45
CBX1-202ENST00000393408 GPR50Q13585 617 aa17.86■□□□□ 0.45
CBX1-202ENST00000393408 ZNF79Q15937 498 aa17.86■□□□□ 0.45
CBX1-202ENST00000393408 SPDYE7PQ495Y7 208 aa17.86■□□□□ 0.45
CBX1-202ENST00000393408 ARHGAP15Q53QZ3 475 aa17.86■□□□□ 0.45
CBX1-202ENST00000393408 ZMAT1Q5H9K5 638 aa17.86■□□□□ 0.45
CBX1-202ENST00000393408 PAQR6Q6TCH4 344 aa17.86■□□□□ 0.45
CBX1-202ENST00000393408 TMPRSS11AQ6ZMR5 421 aa17.86■□□□□ 0.45
CBX1-202ENST00000393408 C11orf96Q7Z7L8 435 aa17.86■□□□□ 0.45
CBX1-202ENST00000393408 LAX1Q8IWV1 398 aa17.86■□□□□ 0.45
CBX1-202ENST00000393408 CELF5Q8N6W0 485 aaKnown RBP17.86■□□□□ 0.45
CBX1-202ENST00000393408 OR6F1Q8NGZ6 308 aa17.86■□□□□ 0.45
CBX1-202ENST00000393408 ZNF607Q96SK3 696 aa17.86■□□□□ 0.45
CBX1-202ENST00000393408 SERHL2Q9H4I8 314 aa17.86■□□□□ 0.45
CBX1-202ENST00000393408 MVB12BQ9H7P6 319 aa17.86■□□□□ 0.45
CBX1-202ENST00000393408 GRIP1Q9Y3R0 1128 aa17.86■□□□□ 0.45
CBX1-202ENST00000393408 PCDHGB2Q9Y5G2 931 aa17.86■□□□□ 0.45
CBX1-202ENST00000393408 KELP23276 732 aa17.86■□□□□ 0.45
CBX1-202ENST00000393408 RFX2P48378 723 aa17.86■□□□□ 0.45
CBX1-202ENST00000393408 SMIM11AP58511 58 aa17.86■□□□□ 0.45
CBX1-202ENST00000393408 ALDH6A1Q02252 535 aaKnown RBP17.86■□□□□ 0.45
CBX1-202ENST00000393408 NXNL2Q5VZ03 156 aa17.86■□□□□ 0.45
CBX1-202ENST00000393408 PHC2Q8IXK0 858 aa17.86■□□□□ 0.45
CBX1-202ENST00000393408 IQCF1Q8N6M8 205 aa17.86■□□□□ 0.45
CBX1-202ENST00000393408 RASSF5Q8WWW0 418 aa17.86■□□□□ 0.45
CBX1-202ENST00000393408 NEDD4LQ96PU5 975 aa17.86■□□□□ 0.45
CBX1-202ENST00000393408 TP63Q9H3D4 680 aaPredicted RBP17.86■□□□□ 0.45
CBX1-202ENST00000393408 SEC14L3Q9UDX4 400 aa17.86■□□□□ 0.45
CBX1-202ENST00000393408 A4GNTQ9UNA3 340 aa17.86■□□□□ 0.45
CBX1-202ENST00000393408 GPR34Q9UPC5 381 aa17.86■□□□□ 0.45
CBX1-202ENST00000393408 PCYT1BQ9Y5K3 369 aaPredicted RBP17.86■□□□□ 0.45
CBX1-202ENST00000393408 CYP17A1P05093 508 aa17.85■□□□□ 0.45
CBX1-202ENST00000393408 CISD3P0C7P0 127 aa17.85■□□□□ 0.45
CBX1-202ENST00000393408 C6P13671 934 aa17.85■□□□□ 0.45
CBX1-202ENST00000393408 GSTM5P46439 218 aa17.85■□□□□ 0.45
CBX1-202ENST00000393408 C17orf64Q86WR6 236 aa17.85■□□□□ 0.45
CBX1-202ENST00000393408 EXOSC8Q96B26 276 aaKnown RBP17.85■□□□□ 0.45
CBX1-202ENST00000393408 ARRDC3Q96B67 414 aa17.85■□□□□ 0.45
CBX1-202ENST00000393408 NRTNQ99748 197 aa17.85■□□□□ 0.45
CBX1-202ENST00000393408 TREX2Q9BQ50 279 aaPredicted RBP17.85■□□□□ 0.45
CBX1-202ENST00000393408 LHX9Q9NQ69 397 aa17.85■□□□□ 0.45
CBX1-202ENST00000393408 HCN2Q9UL51 889 aa17.85■□□□□ 0.45
CBX1-202ENST00000393408 SSR3Q9UNL2 185 aa17.85■□□□□ 0.45
CBX1-202ENST00000393408 NOTCH4Q99466 2003 aa17.85■□□□□ 0.45
CBX1-202ENST00000393408 IQCMA0A1B0GVH7 501 aa17.84■□□□□ 0.45
CBX1-202ENST00000393408 PRAMEF27A3QJZ7 478 aa17.84■□□□□ 0.45
CBX1-202ENST00000393408 RGS13O14921 159 aa17.84■□□□□ 0.45
CBX1-202ENST00000393408 SLC28A2O43868 658 aa17.84■□□□□ 0.45
CBX1-202ENST00000393408 PRKYO43930 277 aa17.84■□□□□ 0.45
CBX1-202ENST00000393408 KRT8P05787 483 aa17.84■□□□□ 0.45
CBX1-202ENST00000393408 TNNI3P19429 210 aa17.84■□□□□ 0.45
CBX1-202ENST00000393408 TGM4P49221 684 aa17.84■□□□□ 0.45
CBX1-202ENST00000393408 C1DQ13901 141 aaKnown RBP17.84■□□□□ 0.45
CBX1-202ENST00000393408 LARS2Q15031 903 aaKnown RBP17.84■□□□□ 0.45
CBX1-202ENST00000393408 BAK1Q16611 211 aa17.84■□□□□ 0.45
CBX1-202ENST00000393408 NDUFA5Q16718 116 aa17.84■□□□□ 0.45
CBX1-202ENST00000393408 PDZD3Q86UT5 571 aa17.84■□□□□ 0.45
CBX1-202ENST00000393408 COMTD1Q86VU5 262 aa17.84■□□□□ 0.45
CBX1-202ENST00000393408 FAM26EQ8N5C1 309 aa17.84■□□□□ 0.45
CBX1-202ENST00000393408 PSD4Q8NDX1 1056 aa17.84■□□□□ 0.45
CBX1-202ENST00000393408 CAPNS2Q96L46 248 aa17.84■□□□□ 0.45
CBX1-202ENST00000393408 TOX2Q96NM4 488 aa17.84■□□□□ 0.45
CBX1-202ENST00000393408 SRRQ9GZT4 340 aa17.84■□□□□ 0.45
CBX1-202ENST00000393408 PELI2Q9HAT8 420 aa17.84■□□□□ 0.45
CBX1-202ENST00000393408 CUEDC1Q9NWM3 386 aaPredicted RBP17.84■□□□□ 0.45
CBX1-202ENST00000393408 TVP23BQ9NYZ1 205 aa17.84■□□□□ 0.45
CBX1-202ENST00000393408 TAC3Q9UHF0 121 aa17.84■□□□□ 0.45
CBX1-202ENST00000393408 ZNF221Q9UK13 617 aa17.84■□□□□ 0.45
CBX1-202ENST00000393408 MYL12BO14950 172 aa17.84■□□□□ 0.45
CBX1-202ENST00000393408 FGF19O95750 216 aa17.84■□□□□ 0.45
CBX1-202ENST00000393408 PRNPP04156 253 aa17.84■□□□□ 0.45
CBX1-202ENST00000393408 RHOP08100 348 aa17.84■□□□□ 0.45
CBX1-202ENST00000393408 S100A1P23297 94 aa17.84■□□□□ 0.45
CBX1-202ENST00000393408 DPTQ07507 201 aa17.84■□□□□ 0.45
CBX1-202ENST00000393408 PIN1Q13526 163 aaPredicted RBP17.84■□□□□ 0.45
CBX1-202ENST00000393408 SYPL1Q16563 259 aa17.84■□□□□ 0.45
CBX1-202ENST00000393408 LIPKQ5VXJ0 399 aa17.84■□□□□ 0.45
CBX1-202ENST00000393408 PODNL1Q6PEZ8 512 aa17.84■□□□□ 0.45
CBX1-202ENST00000393408 DCUN1D3Q8IWE4 304 aa17.84■□□□□ 0.45
CBX1-202ENST00000393408 OR9Q1Q8NGQ5 310 aa17.84■□□□□ 0.45
CBX1-202ENST00000393408 AIF1LQ9BQI0 150 aa17.84■□□□□ 0.45
CBX1-202ENST00000393408 POLDIP3Q9BY77 421 aaKnown RBP17.84■□□□□ 0.45
CBX1-202ENST00000393408 PAK6Q9NQU5 681 aaPredicted RBP17.84■□□□□ 0.45
CBX1-202ENST00000393408 DIMT1Q9UNQ2 313 aaKnown RBP17.84■□□□□ 0.45
CBX1-202ENST00000393408 CMAHPQ9Y471 501 aa17.84■□□□□ 0.45
CBX1-202ENST00000393408 NME6O75414 186 aaPredicted RBP17.83■□□□□ 0.45
CBX1-202ENST00000393408 ERGP11308 486 aa17.83■□□□□ 0.45
CBX1-202ENST00000393408 TCEA1P23193 301 aaKnown RBP17.83■□□□□ 0.45
CBX1-202ENST00000393408 CCT3P49368 545 aaKnown RBP17.83■□□□□ 0.45
CBX1-202ENST00000393408 RUNX1T1Q06455 604 aa17.83■□□□□ 0.45
CBX1-202ENST00000393408 SLC25A30Q5SVS4 291 aa17.83■□□□□ 0.45
CBX1-202ENST00000393408 ATAD3CQ5T2N8 411 aa17.83■□□□□ 0.45
CBX1-202ENST00000393408 CD300LDQ6UXZ3 194 aa17.83■□□□□ 0.45
CBX1-202ENST00000393408 TBC1D19Q8N5T2 526 aa17.83■□□□□ 0.45
CBX1-202ENST00000393408 OR52I1Q8NGK6 324 aa17.83■□□□□ 0.45
CBX1-202ENST00000393408 OTUB2Q96DC9 234 aa17.83■□□□□ 0.45
CBX1-202ENST00000393408 ZSWIM3Q96MP5 696 aa17.83■□□□□ 0.45
CBX1-202ENST00000393408 ZNF232Q9UNY5 417 aa17.83■□□□□ 0.45
CBX1-202ENST00000393408 PRKAB1Q9Y478 270 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms