RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 WDR41Q9HAD4 459 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 RRAGDQ9NQL2 400 aaPredicted RBP7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 OLAHQ9NV23 265 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 COPS7AQ9UBW8 275 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 GIMAP2Q9UG22 337 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 MCM8Q9UJA3 840 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 MID2Q9UJV3 735 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 ADAM29Q9UKF5 820 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 CES1P1Q9UKY3 287 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 PCDHA9Q9Y5H5 950 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 CPAMD8Q8IZJ3 1885 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 COL12A1Q99715 3063 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 DOCK10Q96BY6 2186 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 A0A0G2JMM0 328 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 A0A1W2PPB8 328 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 A0A1W2PRS3 328 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 C1orf226A1L170 272 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 CCDC151A5D8V7 595 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 ANKUB1A6NFN9 424 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 KIR3DP1A8MWS1 328 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 FCHO1O14526 889 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 AZIN1O14977 448 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 ITM2AO43736 263 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 SEMA7AO75326 666 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 NME6O75414 186 aaPredicted RBP7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 SLC25A12O75746 678 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 LRATO95237 230 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 RASAL1O95294 804 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 CBX6O95503 412 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 IGKV3-11P04433 115 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 SP1P08047 785 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 ANXA4P09525 319 aaPredicted RBP7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 LINC00032P0C843 101 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 SLC35E2P0CK97 266 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 RNF224P0DH78 156 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 UROSP10746 265 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 CD46P15529 392 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 NT5EP21589 574 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 TACR1P25103 407 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 PIK3R1P27986 724 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 TRHRP34981 398 aaPredicted RBP7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 SERPINB4P48594 390 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 CYB561P49447 251 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 HLCSP50747 726 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 SSR4P51571 173 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 TDGF1P3P51864 188 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 KCNK10P57789 538 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 GPR85P60893 370 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 ASPHQ12797 758 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 DUSP8Q13202 625 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 EXOSC7Q15024 291 aaKnown RBP7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 MAPKAPK3Q16644 382 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 SPRED3Q2MJR0 410 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 ARL13AQ5H913 290 aaPredicted RBP7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 SH2D4BQ5SQS7 431 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 BEND6Q5SZJ8 279 aaPredicted RBP7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 FAM111BQ6SJ93 734 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 IL20RBQ6UXL0 311 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 TMEM64Q6YI46 380 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 LGI4Q8N135 537 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 CYP4Z2PQ8N1L4 340 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 TMEM156Q8N614 296 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 CPSF7Q8N684 471 aaKnown RBP7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 GBP7Q8N8V2 638 aaPredicted RBP7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 GALNT11Q8NCW6 608 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 ADCY4Q8NFM4 1077 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 OR4K14Q8NGD5 310 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 PRR7Q8TB68 274 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 C16orf78Q8WTQ4 265 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 FAR1Q8WVX9 515 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 ASB15Q8WXK1 588 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 EXOSC8Q96B26 276 aaKnown RBP7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 SCMH1Q96GD3 660 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 FBXL20Q96IG2 436 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 C5orf34Q96MH7 638 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 RASL10BQ96S79 203 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 BARD1Q99728 777 aaKnown RBP7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 SLX1AQ9BQ83 275 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 BRINP2Q9C0B6 783 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 ANKRA2Q9H9E1 313 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 CXorf21Q9HAI6 301 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 KCNK9Q9NPC2 374 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 PFDN4Q9NQP4 134 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 AGPAT4Q9NRZ5 378 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 NMRK1Q9NWW6 199 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 MYOTQ9UBF9 498 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 UTS2RQ9UKP6 389 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 DLGAP4Q9Y2H0 992 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 CCL27Q9Y4X3 112 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 FLNCQ14315 2725 aa7.11□□□□□ -1.27
HMGB3P1-201ENST00000393368 PINLYPA6NC86 204 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 A8MVJ9 347 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 PIP5K1BO14986 540 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 CTIFO43310 598 aaKnown RBP7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 NME2P1O60361 137 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 NPHS1O60500 1241 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 SKAP2O75563 359 aaPredicted RBP7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 RSL1D1O76021 490 aaKnown RBP7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 NADKO95544 446 aaPredicted RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms