RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 TLX1P31314 330 aaPredicted RBP10.03□□□□□ -0.8
CALD1-203ENST00000393118 CRISP3P54108 245 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 GABARAPL2P60520 117 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 RGS1Q08116 209 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 LRIF1Q5T3J3 769 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 TMEM215Q68D42 235 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 MEX3DQ86XN8 651 aaKnown RBP10.03□□□□□ -0.8
CALD1-203ENST00000393118 CELF2-AS1Q8N7Q2 184 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 OR8K5Q8NH50 307 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 OR4K3Q96R72 315 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 UCK2Q9BZX2 261 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 ADAP2Q9NPF8 381 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 PAK6Q9NQU5 681 aaPredicted RBP10.03□□□□□ -0.8
CALD1-203ENST00000393118 SNTG1Q9NSN8 517 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 ERVK13-1Q9NX77 482 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 P2RX2Q9UBL9 471 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 PRRT4C9JH25 899 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 ANHXE9PGG2 379 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 ATP6V1G2-DDX39BF2Z307 99 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 ZNF821O75541 412 aaPredicted RBP10.03□□□□□ -0.8
CALD1-203ENST00000393118 ALX3O95076 343 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 UQCRC2P22695 453 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 CSNK2BP67870 215 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 MLLT1Q03111 559 aaPredicted RBP10.03□□□□□ -0.8
CALD1-203ENST00000393118 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.03□□□□□ -0.8
CALD1-203ENST00000393118 IRAK1BP1Q5VVH5 260 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 RASSF6Q6ZTQ3 369 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 USP30Q70CQ3 517 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 ZNF675Q8TD23 568 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 MAP6Q96JE9 813 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 LMLNQ96KR4 655 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 NECTIN4Q96NY8 510 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 ZNF300Q96RE9 604 aaPredicted RBP10.03□□□□□ -0.8
CALD1-203ENST00000393118 NEUROD4Q9HD90 331 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 SERHLQ9NQF3 203 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 SSR3Q9UNL2 185 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 MAN2B2Q9Y2E5 1009 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 ARID1BQ8NFD5 2236 aaPredicted RBP10.03□□□□□ -0.8
CALD1-203ENST00000393118 FAM240BA0A1B0GVZ2 78 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 FAM227AF5H4B4 570 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 RNASET2O00584 256 aaKnown RBP10.03□□□□□ -0.8
CALD1-203ENST00000393118 PCDH17O14917 1159 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 VEGFDO43915 354 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 C1QCP02747 245 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 GPX2P18283 190 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 ITGB7P26010 798 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 CMPK1P30085 196 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 ITGA1P56199 1179 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 ISL1P61371 349 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 POU6F2P78424 691 aaPredicted RBP10.03□□□□□ -0.8
CALD1-203ENST00000393118 ID2Q02363 134 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 KCNC4Q03721 635 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 ATAT1Q5SQI0 421 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 ATAD3CQ5T2N8 411 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 GARNL3Q5VVW2 1013 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 KHDRBS2Q5VWX1 349 aaKnown RBP10.03□□□□□ -0.8
CALD1-203ENST00000393118 DHRS4L2Q6PKH6 230 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 TIGD4Q8IY51 512 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 C10orf53Q8N6V4 93 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 OR5D16Q8NGK9 328 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 FCGR1BQ92637 280 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 FGF13Q92913 245 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 SLC38A4Q969I6 547 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 SLC38A2Q96QD8 506 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 SAV1Q9H4B6 383 aaPredicted RBP10.03□□□□□ -0.8
CALD1-203ENST00000393118 BRD7Q9NPI1 651 aa10.03□□□□□ -0.8
CALD1-203ENST00000393118 NUFIP1Q9UHK0 495 aaKnown RBP10.03□□□□□ -0.8
CALD1-203ENST00000393118 NYNRINQ9P2P1 1898 aaKnown RBP10.02□□□□□ -0.8
CALD1-203ENST00000393118 DLGAP1O14490 977 aa10.02□□□□□ -0.8
CALD1-203ENST00000393118 PCGF2P35227 344 aa10.02□□□□□ -0.8
CALD1-203ENST00000393118 MLLT10P55197 1068 aa10.02□□□□□ -0.8
CALD1-203ENST00000393118 BTN3A2P78410 334 aa10.02□□□□□ -0.8
CALD1-203ENST00000393118 PRR5P85299 388 aa10.02□□□□□ -0.8
CALD1-203ENST00000393118 RBBP4Q09028 425 aa10.02□□□□□ -0.8
CALD1-203ENST00000393118 GNA13Q14344 377 aa10.02□□□□□ -0.8
CALD1-203ENST00000393118 SLC28A3Q9HAS3 691 aa10.02□□□□□ -0.8
CALD1-203ENST00000393118 CRNNQ9UBG3 495 aaPredicted RBP10.02□□□□□ -0.8
CALD1-203ENST00000393118 BAIAP2Q9UQB8 552 aa10.02□□□□□ -0.8
CALD1-203ENST00000393118 ZSWIM8A7E2V4 1837 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 ZNF860A6NHJ4 632 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 OR2B3O76000 313 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 IL7P13232 177 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 PRKCAP17252 672 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 ITGB8P26012 769 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 CNR2P34972 360 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 ZSWIM7Q19AV6 140 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 PROX2Q3B8N5 592 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 LEXMQ3ZCV2 418 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 TOR1AIP1Q5JTV8 583 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 SMARCD3Q6STE5 483 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 OLIG3Q7RTU3 272 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 PARGQ86W56 976 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 C12orf40Q86WS4 652 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 PLA2G15Q8NCC3 412 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 SPPL3Q8TCT6 385 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 PCNPQ8WW12 178 aaKnown RBP10.02□□□□□ -0.81
CALD1-203ENST00000393118 TMCO6Q96DC7 493 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 DPH7Q9BTV6 452 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 SRMSQ9H3Y6 488 aa10.02□□□□□ -0.81
CALD1-203ENST00000393118 TIGARQ9NQ88 270 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms