RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 SLC12A3P55017 1021 aa4.28□□□□□ -1.72
SNORA40.4-201ENST00000390971 STX1BP61266 288 aa4.28□□□□□ -1.72
SNORA40.4-201ENST00000390971 IGLV3-21P80748 117 aaPredicted RBP4.28□□□□□ -1.72
SNORA40.4-201ENST00000390971 CDKL1Q00532 357 aa4.28□□□□□ -1.72
SNORA40.4-201ENST00000390971 STX1AQ16623 288 aa4.28□□□□□ -1.72
SNORA40.4-201ENST00000390971 ITIH5Q86UX2 942 aa4.28□□□□□ -1.72
SNORA40.4-201ENST00000390971 NAXDQ8IW45 347 aa4.28□□□□□ -1.72
SNORA40.4-201ENST00000390971 NKAIN3Q8N8D7 197 aa4.28□□□□□ -1.72
SNORA40.4-201ENST00000390971 FIBINQ8TAL6 211 aa4.28□□□□□ -1.72
SNORA40.4-201ENST00000390971 UBTD2Q8WUN7 234 aa4.28□□□□□ -1.72
SNORA40.4-201ENST00000390971 TTYH2Q9BSA4 534 aa4.28□□□□□ -1.72
SNORA40.4-201ENST00000390971 Q9HAA7 133 aa4.28□□□□□ -1.72
SNORA40.4-201ENST00000390971 MAGEF1Q9HAY2 307 aa4.28□□□□□ -1.72
SNORA40.4-201ENST00000390971 SPG21Q9NZD8 308 aa4.28□□□□□ -1.72
SNORA40.4-201ENST00000390971 MLXQ9UH92 298 aa4.28□□□□□ -1.72
SNORA40.4-201ENST00000390971 ZNF646O15015 1829 aaPredicted RBP4.28□□□□□ -1.72
SNORA40.4-201ENST00000390971 TSPAN2O60636 221 aa4.27□□□□□ -1.73
SNORA40.4-201ENST00000390971 IGHG3P01860 377 aa4.27□□□□□ -1.73
SNORA40.4-201ENST00000390971 MBL2P11226 248 aaPredicted RBP4.27□□□□□ -1.73
SNORA40.4-201ENST00000390971 VCLP18206 1134 aa4.27□□□□□ -1.73
SNORA40.4-201ENST00000390971 TNFSF10P50591 281 aa4.27□□□□□ -1.73
SNORA40.4-201ENST00000390971 TTC31Q49AM3 519 aaPredicted RBP4.27□□□□□ -1.73
SNORA40.4-201ENST00000390971 UNC50Q53HI1 259 aa4.27□□□□□ -1.73
SNORA40.4-201ENST00000390971 RHBDD2Q6NTF9 364 aa4.27□□□□□ -1.73
SNORA40.4-201ENST00000390971 C11orf42Q8N5U0 333 aa4.27□□□□□ -1.73
SNORA40.4-201ENST00000390971 CFAP36Q96G28 342 aa4.27□□□□□ -1.73
SNORA40.4-201ENST00000390971 B3GALT6Q96L58 329 aa4.27□□□□□ -1.73
SNORA40.4-201ENST00000390971 TAS2R16Q9NYV7 291 aa4.27□□□□□ -1.73
SNORA40.4-201ENST00000390971 ZNF256Q9Y2P7 627 aaPredicted RBP4.27□□□□□ -1.73
SNORA40.4-201ENST00000390971 RALGAPA1Q6GYQ0 2036 aa4.27□□□□□ -1.73
SNORA40.4-201ENST00000390971 CROCCQ5TZA2 2017 aa4.26□□□□□ -1.73
SNORA40.4-201ENST00000390971 A0A0U1RQK1 487 aa4.26□□□□□ -1.73
SNORA40.4-201ENST00000390971 ZNF320A2RRD8 509 aa4.26□□□□□ -1.73
SNORA40.4-201ENST00000390971 SLC15A5A6NIM6 579 aa4.26□□□□□ -1.73
SNORA40.4-201ENST00000390971 TXNDC12O95881 172 aa4.26□□□□□ -1.73
SNORA40.4-201ENST00000390971 CHRNGP07510 517 aa4.26□□□□□ -1.73
SNORA40.4-201ENST00000390971 SNRPCP09234 159 aaKnown RBP4.26□□□□□ -1.73
SNORA40.4-201ENST00000390971 NUDT17P0C025 328 aa4.26□□□□□ -1.73
SNORA40.4-201ENST00000390971 TPBGLP0DKB5 382 aa4.26□□□□□ -1.73
SNORA40.4-201ENST00000390971 HMGCLP35914 325 aa4.26□□□□□ -1.73
SNORA40.4-201ENST00000390971 FNTAP49354 379 aa4.26□□□□□ -1.73
SNORA40.4-201ENST00000390971 SERPINH1P50454 418 aaKnown RBP4.26□□□□□ -1.73
SNORA40.4-201ENST00000390971 NDPQ00604 133 aa4.26□□□□□ -1.73
SNORA40.4-201ENST00000390971 TRADDQ15628 312 aa4.26□□□□□ -1.73
SNORA40.4-201ENST00000390971 KRT77Q7Z794 578 aa4.26□□□□□ -1.73
SNORA40.4-201ENST00000390971 SIDT2Q8NBJ9 832 aaKnown RBP4.26□□□□□ -1.73
SNORA40.4-201ENST00000390971 OR4L1Q8NH43 312 aa4.26□□□□□ -1.73
SNORA40.4-201ENST00000390971 CYYR1Q96J86 154 aa4.26□□□□□ -1.73
SNORA40.4-201ENST00000390971 EPSTI1Q96J88 318 aa4.26□□□□□ -1.73
SNORA40.4-201ENST00000390971 CAPNS2Q96L46 248 aa4.26□□□□□ -1.73
SNORA40.4-201ENST00000390971 NTMT1Q9BV86 223 aa4.26□□□□□ -1.73
SNORA40.4-201ENST00000390971 YTHDF1Q9BYJ9 559 aaKnown RBP4.26□□□□□ -1.73
SNORA40.4-201ENST00000390971 RNF41Q9H4P4 317 aaPredicted RBP4.26□□□□□ -1.73
SNORA40.4-201ENST00000390971 CNIH4Q9P003 139 aa4.26□□□□□ -1.73
SNORA40.4-201ENST00000390971 MRTO4Q9UKD2 239 aaKnown RBP4.26□□□□□ -1.73
SNORA40.4-201ENST00000390971 A0A1W2PNU3 283 aaPredicted RBP4.25□□□□□ -1.73
SNORA40.4-201ENST00000390971 SH3PXD2BA1X283 911 aa4.25□□□□□ -1.73
SNORA40.4-201ENST00000390971 YJEFN3A6XGL0 299 aa4.25□□□□□ -1.73
SNORA40.4-201ENST00000390971 CACNB4O00305 520 aaPredicted RBP4.25□□□□□ -1.73
SNORA40.4-201ENST00000390971 ZNF263O14978 683 aa4.25□□□□□ -1.73
SNORA40.4-201ENST00000390971 PSMD3O43242 534 aa4.25□□□□□ -1.73
SNORA40.4-201ENST00000390971 B4GALT1P15291 398 aa4.25□□□□□ -1.73
SNORA40.4-201ENST00000390971 PPP1R3AQ16821 1122 aa4.25□□□□□ -1.73
SNORA40.4-201ENST00000390971 MPPE1Q53F39 396 aa4.25□□□□□ -1.73
SNORA40.4-201ENST00000390971 CGB2Q6NT52 195 aa4.25□□□□□ -1.73
SNORA40.4-201ENST00000390971 KCTD9Q7L273 389 aa4.25□□□□□ -1.73
SNORA40.4-201ENST00000390971 Q8N7P7 452 aa4.25□□□□□ -1.73
SNORA40.4-201ENST00000390971 OR6M1Q8NGM8 313 aa4.25□□□□□ -1.73
SNORA40.4-201ENST00000390971 BADQ92934 168 aa4.25□□□□□ -1.73
SNORA40.4-201ENST00000390971 FAM46BQ96A09 425 aa4.25□□□□□ -1.73
SNORA40.4-201ENST00000390971 JAKMIP1Q96N16 626 aaKnown RBP4.25□□□□□ -1.73
SNORA40.4-201ENST00000390971 C19orf43Q9BQ61 176 aa4.25□□□□□ -1.73
SNORA40.4-201ENST00000390971 SLC26A1Q9H2B4 701 aa4.25□□□□□ -1.73
SNORA40.4-201ENST00000390971 GANQ9H2C0 597 aa4.25□□□□□ -1.73
SNORA40.4-201ENST00000390971 SLC25A19Q9HC21 320 aa4.25□□□□□ -1.73
SNORA40.4-201ENST00000390971 Q9UF83 564 aa4.25□□□□□ -1.73
SNORA40.4-201ENST00000390971 ATG4BQ9Y4P1 393 aa4.25□□□□□ -1.73
SNORA40.4-201ENST00000390971 A0A0A6YYC8 382 aaPredicted RBP4.24□□□□□ -1.73
SNORA40.4-201ENST00000390971 I3L1I5 382 aaPredicted RBP4.24□□□□□ -1.73
SNORA40.4-201ENST00000390971 STBD1O95210 358 aa4.24□□□□□ -1.73
SNORA40.4-201ENST00000390971 PRAMEF12O95522 483 aa4.24□□□□□ -1.73
SNORA40.4-201ENST00000390971 GOT2P00505 430 aaKnown RBP4.24□□□□□ -1.73
SNORA40.4-201ENST00000390971 GIG44P09565 113 aaPredicted RBP4.24□□□□□ -1.73
SNORA40.4-201ENST00000390971 SBK2P0C263 348 aa4.24□□□□□ -1.73
SNORA40.4-201ENST00000390971 MEOX2P50222 304 aa4.24□□□□□ -1.73
SNORA40.4-201ENST00000390971 ARHGDIAP52565 204 aa4.24□□□□□ -1.73
SNORA40.4-201ENST00000390971 SLC7A2P52569 658 aa4.24□□□□□ -1.73
SNORA40.4-201ENST00000390971 PIWIL3Q7Z3Z3 882 aaKnown RBP4.24□□□□□ -1.73
SNORA40.4-201ENST00000390971 PARP8Q8N3A8 854 aa4.24□□□□□ -1.73
SNORA40.4-201ENST00000390971 GTSF1Q8WW33 167 aa4.24□□□□□ -1.73
SNORA40.4-201ENST00000390971 GLYATL1Q969I3 302 aa4.24□□□□□ -1.73
SNORA40.4-201ENST00000390971 CXorf58Q96LI9 332 aa4.24□□□□□ -1.73
SNORA40.4-201ENST00000390971 SIGLEC12Q96PQ1 595 aa4.24□□□□□ -1.73
SNORA40.4-201ENST00000390971 DDX50Q9BQ39 737 aaKnown RBP4.24□□□□□ -1.73
SNORA40.4-201ENST00000390971 ST6GALNAC5Q9BVH7 336 aa4.24□□□□□ -1.73
SNORA40.4-201ENST00000390971 AKIRIN1Q9H9L7 192 aaPredicted RBP4.24□□□□□ -1.73
SNORA40.4-201ENST00000390971 DDX28Q9NUL7 540 aaKnown RBP4.24□□□□□ -1.73
SNORA40.4-201ENST00000390971 IGHV3OR16-12A0A075B7B8 117 aa4.23□□□□□ -1.73
SNORA40.4-201ENST00000390971 A0A1W2PRQ8 180 aa4.23□□□□□ -1.73
SNORA40.4-201ENST00000390971 SAP18O00422 153 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms