RNA–Protein interactions for RNA: ENST00000390687.8

SNRPN-202, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPN, Length 1,528 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-202ENST00000390687 CNPPD1Q9BV87 410 aa13.8□□□□□ -0.2
SNRPN-202ENST00000390687 TIMMDC1Q9NPL8 285 aa13.8□□□□□ -0.2
SNRPN-202ENST00000390687 DEPPQ9NTK1 212 aa13.8□□□□□ -0.2
SNRPN-202ENST00000390687 ERVK-19Q9WJR5 959 aa13.8□□□□□ -0.2
SNRPN-202ENST00000390687 TIMM22Q9Y584 194 aa13.8□□□□□ -0.2
SNRPN-202ENST00000390687 PCDHA9Q9Y5H5 950 aa13.8□□□□□ -0.2
SNRPN-202ENST00000390687 GTF3C1Q12789 2109 aa13.79□□□□□ -0.2
SNRPN-202ENST00000390687 TLDC2A0PJX2 215 aa13.79□□□□□ -0.2
SNRPN-202ENST00000390687 CLDN1O95832 211 aa13.79□□□□□ -0.2
SNRPN-202ENST00000390687 CLPSP04118 112 aa13.79□□□□□ -0.2
SNRPN-202ENST00000390687 HSD3B1P14060 373 aa13.79□□□□□ -0.2
SNRPN-202ENST00000390687 HSD3B2P26439 372 aa13.79□□□□□ -0.2
SNRPN-202ENST00000390687 PIK3R1P27986 724 aa13.79□□□□□ -0.2
SNRPN-202ENST00000390687 HMOX2P30519 316 aa13.79□□□□□ -0.2
SNRPN-202ENST00000390687 RFC3P40938 356 aa13.79□□□□□ -0.2
SNRPN-202ENST00000390687 HTR6P50406 440 aa13.79□□□□□ -0.2
SNRPN-202ENST00000390687 XKP51811 444 aa13.79□□□□□ -0.2
SNRPN-202ENST00000390687 NAGLUP54802 743 aa13.79□□□□□ -0.2
SNRPN-202ENST00000390687 FOXA1P55317 472 aa13.79□□□□□ -0.2
SNRPN-202ENST00000390687 SLC37A1P57057 533 aa13.79□□□□□ -0.2
SNRPN-202ENST00000390687 GPR85P60893 370 aa13.79□□□□□ -0.2
SNRPN-202ENST00000390687 SLC18A2Q05940 514 aa13.79□□□□□ -0.2
SNRPN-202ENST00000390687 ASPHQ12797 758 aa13.79□□□□□ -0.2
SNRPN-202ENST00000390687 MMP21Q8N119 569 aa13.79□□□□□ -0.2
SNRPN-202ENST00000390687 C4orf33Q8N1A6 199 aa13.79□□□□□ -0.2
SNRPN-202ENST00000390687 ZFP62Q8NB50 900 aaPredicted RBP13.79□□□□□ -0.2
SNRPN-202ENST00000390687 POGLUT1Q8NBL1 392 aa13.79□□□□□ -0.2
SNRPN-202ENST00000390687 PSD4Q8NDX1 1056 aa13.79□□□□□ -0.2
SNRPN-202ENST00000390687 C16orf52Q8NHV5 167 aa13.79□□□□□ -0.2
SNRPN-202ENST00000390687 AGAP11Q8TF27 550 aa13.79□□□□□ -0.2
SNRPN-202ENST00000390687 ART5Q96L15 291 aa13.79□□□□□ -0.2
SNRPN-202ENST00000390687 ACPTQ9BZG2 426 aa13.79□□□□□ -0.2
SNRPN-202ENST00000390687 CXorf21Q9HAI6 301 aa13.79□□□□□ -0.2
SNRPN-202ENST00000390687 UNC79Q9P2D8 2635 aa13.79□□□□□ -0.2
SNRPN-202ENST00000390687 STK38LQ9Y2H1 464 aa13.79□□□□□ -0.2
SNRPN-202ENST00000390687 EML6Q6ZMW3 1958 aa13.78□□□□□ -0.2
SNRPN-202ENST00000390687 TRGV8A0A0C4DH27 118 aa13.78□□□□□ -0.2
SNRPN-202ENST00000390687 COPEO14579 308 aa13.78□□□□□ -0.2
SNRPN-202ENST00000390687 ZNHIT1O43257 154 aa13.78□□□□□ -0.2
SNRPN-202ENST00000390687 SLC19A2O60779 497 aa13.78□□□□□ -0.2
SNRPN-202ENST00000390687 GUCY1B2O75343 617 aa13.78□□□□□ -0.2
SNRPN-202ENST00000390687 SLU7O95391 586 aaKnown RBP13.78□□□□□ -0.2
SNRPN-202ENST00000390687 ENO1P06733 434 aaKnown RBP13.78□□□□□ -0.2
SNRPN-202ENST00000390687 NUDT17P0C025 328 aa13.78□□□□□ -0.2
SNRPN-202ENST00000390687 CPA3P15088 417 aa13.78□□□□□ -0.2
SNRPN-202ENST00000390687 ZNF24P17028 368 aa13.78□□□□□ -0.2
SNRPN-202ENST00000390687 DNAJB13P59910 316 aa13.78□□□□□ -0.2
SNRPN-202ENST00000390687 HMGCS1Q01581 520 aa13.78□□□□□ -0.2
SNRPN-202ENST00000390687 RBPJQ06330 500 aa13.78□□□□□ -0.2
SNRPN-202ENST00000390687 CSTF3Q12996 717 aaKnown RBP13.78□□□□□ -0.2
SNRPN-202ENST00000390687 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.78□□□□□ -0.23e-9■□□□□ 10.7
SNRPN-202ENST00000390687 SLC48A1Q6P1K1 146 aa13.78□□□□□ -0.2
SNRPN-202ENST00000390687 OPN5Q6U736 354 aa13.78□□□□□ -0.2
SNRPN-202ENST00000390687 SCIMPQ6UWF3 145 aa13.78□□□□□ -0.2
SNRPN-202ENST00000390687 CHERPQ8IWX8 916 aaKnown RBP13.78□□□□□ -0.2
SNRPN-202ENST00000390687 GBP7Q8N8V2 638 aaPredicted RBP13.78□□□□□ -0.2
SNRPN-202ENST00000390687 AENQ8WTP8 325 aaKnown RBP13.78□□□□□ -0.2
SNRPN-202ENST00000390687 MID1IP1Q9NPA3 183 aa13.78□□□□□ -0.2
SNRPN-202ENST00000390687 OXSMQ9NWU1 459 aa13.78□□□□□ -0.2
SNRPN-202ENST00000390687 ZNF835Q9Y2P0 537 aa13.78□□□□□ -0.2
SNRPN-202ENST00000390687 PCNX1Q96RV3 2341 aa13.78□□□□□ -0.2
SNRPN-202ENST00000390687 C1orf226A1L170 272 aa13.77□□□□□ -0.21
SNRPN-202ENST00000390687 PINLYPA6NC86 204 aa13.77□□□□□ -0.21
SNRPN-202ENST00000390687 ZG16O60844 167 aa13.77□□□□□ -0.21
SNRPN-202ENST00000390687 NADKO95544 446 aaPredicted RBP13.77□□□□□ -0.21
SNRPN-202ENST00000390687 CT62P0C5K7 136 aa13.77□□□□□ -0.21
SNRPN-202ENST00000390687 CPMP14384 443 aa13.77□□□□□ -0.21
SNRPN-202ENST00000390687 PORP16435 677 aaPredicted RBP13.77□□□□□ -0.21
SNRPN-202ENST00000390687 SSTR4P31391 388 aa13.77□□□□□ -0.21
SNRPN-202ENST00000390687 CA7P43166 264 aa13.77□□□□□ -0.21
SNRPN-202ENST00000390687 TRA2BP62995 288 aaKnown RBP13.77□□□□□ -0.21
SNRPN-202ENST00000390687 RAE1P78406 368 aaKnown RBP13.77□□□□□ -0.21
SNRPN-202ENST00000390687 HSF1Q00613 529 aa13.77□□□□□ -0.21
SNRPN-202ENST00000390687 ZNF791Q3KP31 576 aaPredicted RBP13.77□□□□□ -0.21
SNRPN-202ENST00000390687 WDR93Q6P2C0 686 aa13.77□□□□□ -0.21
SNRPN-202ENST00000390687 RNF111Q6ZNA4 994 aa13.77□□□□□ -0.21
SNRPN-202ENST00000390687 SPPL2CQ8IUH8 684 aa13.77□□□□□ -0.21
SNRPN-202ENST00000390687 RDH11Q8TC12 318 aa13.77□□□□□ -0.21
SNRPN-202ENST00000390687 APIPQ96GX9 242 aa13.77□□□□□ -0.21
SNRPN-202ENST00000390687 SGCZQ96LD1 299 aa13.77□□□□□ -0.21
SNRPN-202ENST00000390687 WWTR1Q9GZV5 400 aa13.77□□□□□ -0.21
SNRPN-202ENST00000390687 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.77□□□□□ -0.21
SNRPN-202ENST00000390687 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.77□□□□□ -0.21
SNRPN-202ENST00000390687 V9GYY5 206 aaPredicted RBP13.77□□□□□ -0.21
SNRPN-202ENST00000390687 CROCCQ5TZA2 2017 aa13.77□□□□□ -0.21
SNRPN-202ENST00000390687 A0A0G2JMM0 328 aa13.76□□□□□ -0.21
SNRPN-202ENST00000390687 A0A1W2PPB8 328 aa13.76□□□□□ -0.21
SNRPN-202ENST00000390687 A0A1W2PRS3 328 aa13.76□□□□□ -0.21
SNRPN-202ENST00000390687 SERTM1A2A2V5 107 aa13.76□□□□□ -0.21
SNRPN-202ENST00000390687 KIR3DP1A8MWS1 328 aa13.76□□□□□ -0.21
SNRPN-202ENST00000390687 HS6ST1O60243 411 aa13.76□□□□□ -0.21
SNRPN-202ENST00000390687 S1PR1P21453 382 aa13.76□□□□□ -0.21
SNRPN-202ENST00000390687 CNR1P21554 472 aa13.76□□□□□ -0.21
SNRPN-202ENST00000390687 SERPINB3P29508 390 aa13.76□□□□□ -0.21
SNRPN-202ENST00000390687 PER3P56645 1201 aa13.76□□□□□ -0.21
SNRPN-202ENST00000390687 FUT7Q11130 342 aa13.76□□□□□ -0.21
SNRPN-202ENST00000390687 EBPQ15125 230 aaKnown RBP13.76□□□□□ -0.21
SNRPN-202ENST00000390687 LYPD8Q6UX82 237 aa13.76□□□□□ -0.21
SNRPN-202ENST00000390687 Q6ZPB1 254 aaPredicted RBP13.76□□□□□ -0.21
SNRPN-202ENST00000390687 RTL4Q6ZR62 310 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms