RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 LSM1O15116 133 aaKnown RBP12.46□□□□□ -0.42
PTPRN2-202ENST00000389416 PGRMC2O15173 223 aa12.46□□□□□ -0.42
PTPRN2-202ENST00000389416 PLGP00747 810 aaPredicted RBP12.46□□□□□ -0.42
PTPRN2-202ENST00000389416 RENP00797 406 aa12.46□□□□□ -0.42
PTPRN2-202ENST00000389416 ARF3P61204 181 aaPredicted RBP12.46□□□□□ -0.42
PTPRN2-202ENST00000389416 RACK1P63244 317 aaKnown RBP12.46□□□□□ -0.42
PTPRN2-202ENST00000389416 MXD1Q05195 221 aa12.46□□□□□ -0.42
PTPRN2-202ENST00000389416 TUBB3Q13509 450 aa12.46□□□□□ -0.42
PTPRN2-202ENST00000389416 RCAN2Q14206 197 aa12.46□□□□□ -0.42
PTPRN2-202ENST00000389416 PIGGQ5H8A4 983 aa12.46□□□□□ -0.42
PTPRN2-202ENST00000389416 ENPP6Q6UWR7 440 aa12.46□□□□□ -0.42
PTPRN2-202ENST00000389416 RABEPKQ7Z6M1 372 aa12.46□□□□□ -0.42
PTPRN2-202ENST00000389416 TMEM151BQ8IW70 566 aa12.46□□□□□ -0.42
PTPRN2-202ENST00000389416 OR9A4Q8NGU2 314 aa12.46□□□□□ -0.42
PTPRN2-202ENST00000389416 OR51A7Q8NH64 312 aa12.46□□□□□ -0.42
PTPRN2-202ENST00000389416 CRB3Q9BUF7 120 aa12.46□□□□□ -0.42
PTPRN2-202ENST00000389416 KCNN2Q9H2S1 579 aa12.46□□□□□ -0.42
PTPRN2-202ENST00000389416 CRNNQ9UBG3 495 aaPredicted RBP12.46□□□□□ -0.42
PTPRN2-202ENST00000389416 RPL36Q9Y3U8 105 aaKnown RBP12.46□□□□□ -0.42
PTPRN2-202ENST00000389416 PCDHGA7Q9Y5G6 932 aa12.46□□□□□ -0.42
PTPRN2-202ENST00000389416 CHST10O43529 356 aa12.45□□□□□ -0.42
PTPRN2-202ENST00000389416 OLFM2O95897 454 aa12.45□□□□□ -0.42
PTPRN2-202ENST00000389416 SLC9A3P48764 834 aa12.45□□□□□ -0.42
PTPRN2-202ENST00000389416 SMSP52788 366 aa12.45□□□□□ -0.42
PTPRN2-202ENST00000389416 PPP2CBP62714 309 aa12.45□□□□□ -0.42
PTPRN2-202ENST00000389416 PPP2CAP67775 309 aa12.45□□□□□ -0.42
PTPRN2-202ENST00000389416 ZNF423Q2M1K9 1284 aa12.45□□□□□ -0.42
PTPRN2-202ENST00000389416 PRPF38BQ5VTL8 546 aaKnown RBP12.45□□□□□ -0.42
PTPRN2-202ENST00000389416 KIAA1211LQ6NV74 962 aa12.45□□□□□ -0.42
PTPRN2-202ENST00000389416 RPTNQ6XPR3 784 aa12.45□□□□□ -0.42
PTPRN2-202ENST00000389416 OR2L8Q8NGY9 312 aa12.45□□□□□ -0.42
PTPRN2-202ENST00000389416 MCFD2Q8NI22 146 aa12.45□□□□□ -0.42
PTPRN2-202ENST00000389416 NAT6Q93015 286 aa12.45□□□□□ -0.42
PTPRN2-202ENST00000389416 EFHD2Q96C19 240 aaPredicted RBP12.45□□□□□ -0.42
PTPRN2-202ENST00000389416 SHROOM3Q8TF72 1996 aa12.45□□□□□ -0.42
PTPRN2-202ENST00000389416 CD27P26842 260 aa12.45□□□□□ -0.42
PTPRN2-202ENST00000389416 CLCN2P51788 898 aa12.45□□□□□ -0.42
PTPRN2-202ENST00000389416 GFOD2Q3B7J2 385 aa12.45□□□□□ -0.42
PTPRN2-202ENST00000389416 TNFAIP8L3Q5GJ75 292 aa12.45□□□□□ -0.42
PTPRN2-202ENST00000389416 SLCO4C1Q6ZQN7 724 aa12.45□□□□□ -0.42
PTPRN2-202ENST00000389416 TMEM150AQ86TG1 271 aa12.45□□□□□ -0.42
PTPRN2-202ENST00000389416 CLIP4Q8N3C7 705 aa12.45□□□□□ -0.42
PTPRN2-202ENST00000389416 ATOH1Q92858 354 aaPredicted RBP12.45□□□□□ -0.42
PTPRN2-202ENST00000389416 FAM129BQ96TA1 746 aa12.45□□□□□ -0.42
PTPRN2-202ENST00000389416 EPHX3Q9H6B9 360 aa12.45□□□□□ -0.42
PTPRN2-202ENST00000389416 BRD7Q9NPI1 651 aa12.45□□□□□ -0.42
PTPRN2-202ENST00000389416 ABCB10Q9NRK6 738 aa12.45□□□□□ -0.42
PTPRN2-202ENST00000389416 RHBDL2Q9NX52 303 aa12.45□□□□□ -0.42
PTPRN2-202ENST00000389416 A0A1B0GTW7 788 aa12.45□□□□□ -0.42
PTPRN2-202ENST00000389416 HMGN2P05204 90 aaKnown RBP12.45□□□□□ -0.42
PTPRN2-202ENST00000389416 FNTBP49356 437 aa12.45□□□□□ -0.42
PTPRN2-202ENST00000389416 IST1P53990 364 aa12.45□□□□□ -0.42
PTPRN2-202ENST00000389416 ATP12AP54707 1039 aa12.45□□□□□ -0.42
PTPRN2-202ENST00000389416 ERV3-1Q14264 604 aa12.45□□□□□ -0.42
PTPRN2-202ENST00000389416 C6orf132Q5T0Z8 1188 aa12.45□□□□□ -0.42
PTPRN2-202ENST00000389416 ZSWIM9Q86XI8 627 aa12.45□□□□□ -0.42
PTPRN2-202ENST00000389416 PATE1Q8WXA2 126 aa12.45□□□□□ -0.42
PTPRN2-202ENST00000389416 STON2Q8WXE9 905 aa12.45□□□□□ -0.42
PTPRN2-202ENST00000389416 LGR4Q9BXB1 951 aa12.45□□□□□ -0.42
PTPRN2-202ENST00000389416 PLA2G2FQ9BZM2 168 aa12.45□□□□□ -0.42
PTPRN2-202ENST00000389416 CENPMQ9NSP4 180 aa12.45□□□□□ -0.42
PTPRN2-202ENST00000389416 KCMF1Q9P0J7 381 aa12.45□□□□□ -0.42
PTPRN2-202ENST00000389416 DPPA5A6NC42 116 aa12.44□□□□□ -0.42
PTPRN2-202ENST00000389416 SOX1O00570 391 aaPredicted RBP12.44□□□□□ -0.42
PTPRN2-202ENST00000389416 SLC30A4O14863 429 aa12.44□□□□□ -0.42
PTPRN2-202ENST00000389416 SEMA3DO95025 777 aa12.44□□□□□ -0.42
PTPRN2-202ENST00000389416 VNN2O95498 520 aa12.44□□□□□ -0.42
PTPRN2-202ENST00000389416 HSD17B1P14061 328 aa12.44□□□□□ -0.42
PTPRN2-202ENST00000389416 OR1D4P47884 311 aa12.44□□□□□ -0.42
PTPRN2-202ENST00000389416 ZNF41P51814 821 aaPredicted RBP12.44□□□□□ -0.42
PTPRN2-202ENST00000389416 KCNAB2Q13303 367 aa12.44□□□□□ -0.42
PTPRN2-202ENST00000389416 RGNQ15493 299 aa12.44□□□□□ -0.42
PTPRN2-202ENST00000389416 C5orf22Q49AR2 442 aa12.44□□□□□ -0.42
PTPRN2-202ENST00000389416 COLEC12Q5KU26 742 aa12.44□□□□□ -0.42
PTPRN2-202ENST00000389416 PERM1Q5SV97 790 aa12.44□□□□□ -0.42
PTPRN2-202ENST00000389416 TCEANCQ8N8B7 351 aa12.44□□□□□ -0.42
PTPRN2-202ENST00000389416 PSMA8Q8TAA3 256 aa12.44□□□□□ -0.42
PTPRN2-202ENST00000389416 ENKURQ8TC29 256 aa12.44□□□□□ -0.42
PTPRN2-202ENST00000389416 HSPBAP1Q96EW2 488 aa12.44□□□□□ -0.42
PTPRN2-202ENST00000389416 SEC61A2Q9H9S3 476 aa12.44□□□□□ -0.42
PTPRN2-202ENST00000389416 ZNFX1Q9P2E3 1918 aaKnown RBP12.44□□□□□ -0.42
PTPRN2-202ENST00000389416 UBFD1O14562 309 aaKnown RBP12.44□□□□□ -0.42
PTPRN2-202ENST00000389416 TP53I11O14683 189 aa12.44□□□□□ -0.42
PTPRN2-202ENST00000389416 FZD6O60353 706 aa12.44□□□□□ -0.42
PTPRN2-202ENST00000389416 UGT2B7P16662 529 aa12.44□□□□□ -0.42
PTPRN2-202ENST00000389416 NPTX1Q15818 432 aa12.44□□□□□ -0.42
PTPRN2-202ENST00000389416 SMU1Q2TAY7 513 aa12.44□□□□□ -0.42
PTPRN2-202ENST00000389416 FAM69BQ5VUD6 431 aa12.44□□□□□ -0.42
PTPRN2-202ENST00000389416 SYCE2Q6PIF2 218 aa12.44□□□□□ -0.42
PTPRN2-202ENST00000389416 Q6ZSR9 355 aa12.44□□□□□ -0.42
PTPRN2-202ENST00000389416 ZNF550Q7Z398 422 aa12.44□□□□□ -0.42
PTPRN2-202ENST00000389416 WDR53Q7Z5U6 358 aaPredicted RBP12.44□□□□□ -0.42
PTPRN2-202ENST00000389416 P2RY8Q86VZ1 359 aa12.44□□□□□ -0.42
PTPRN2-202ENST00000389416 LINC00471Q8N535 108 aa12.44□□□□□ -0.42
PTPRN2-202ENST00000389416 DTWD1Q8N5C7 304 aa12.44□□□□□ -0.42
PTPRN2-202ENST00000389416 MAFAQ8NHW3 353 aaPredicted RBP12.44□□□□□ -0.42
PTPRN2-202ENST00000389416 SLC37A2Q8TED4 501 aa12.44□□□□□ -0.42
PTPRN2-202ENST00000389416 TSEN15Q8WW01 171 aaKnown RBP12.44□□□□□ -0.42
PTPRN2-202ENST00000389416 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.44□□□□□ -0.426e-7■■■■■ 34.5
PTPRN2-202ENST00000389416 PSIP1O75475 530 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms