RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 C2CD3Q4AC94 2353 aa8.62□□□□□ -1.03
HMGN1-202ENST00000380747 ZFHX3Q15911 3703 aa8.62□□□□□ -1.03
HMGN1-202ENST00000380747 TNRC6AQ8NDV7 1962 aaKnown RBP8.61□□□□□ -1.03
HMGN1-202ENST00000380747 TRBV11-1A0A0K0K1C0 115 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 DYTNA2CJ06 578 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 WDR91A4D1P6 747 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 GOLGA6L10A6NI86 522 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 WASHC1A8K0Z3 465 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 C17orf105B2RV13 164 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 AZIN1O14977 448 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 TM9SF1O15321 606 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 PCDH7O60245 1069 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 OR10H2O60403 315 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 NPHS1O60500 1241 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 GUCY1B2O75343 617 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 AGFG2O95081 481 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 GPR75O95800 540 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 WDPCPO95876 746 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 CHRNGP07510 517 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 BPGMP07738 259 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 UROSP10746 265 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 NEFHP12036 1026 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 COX7A2P14406 83 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 ALOX15P16050 662 aaPredicted RBP8.61□□□□□ -1.03
HMGN1-202ENST00000380747 STT3AP46977 705 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 ST13P50502 369 aaKnown RBP8.61□□□□□ -1.03
HMGN1-202ENST00000380747 ACSM2AQ08AH3 577 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 GALNT1Q10472 559 aaPredicted RBP8.61□□□□□ -1.03
HMGN1-202ENST00000380747 CASP8Q14790 479 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 TERF2Q15554 542 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 MEP1AQ16819 746 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 SPIN4Q56A73 249 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 ARL13AQ5H913 290 aaPredicted RBP8.61□□□□□ -1.03
HMGN1-202ENST00000380747 ACER2Q5QJU3 275 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 FHL5Q5TD97 284 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 NDUFAF5Q5TEU4 345 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 ACSM2BQ68CK6 577 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 CLEC6AQ6EIG7 209 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 OR52E8Q6IFG1 317 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 IGFL2Q6UWQ7 119 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 CUZD1Q86UP6 607 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 NUDCD3Q8IVD9 361 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 BEST3Q8N1M1 668 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 ANKRD42Q8N9B4 389 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 C7orf57Q8NEG2 295 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 AGR3Q8TD06 166 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 ELP5Q8TE02 316 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 DOK4Q8TEW6 326 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 SSC4DQ8WTU2 575 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 PTPMT1Q8WUK0 201 aaPredicted RBP8.61□□□□□ -1.03
HMGN1-202ENST00000380747 CHTF18Q8WVB6 975 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 DAZLQ92904 295 aaKnown RBP8.61□□□□□ -1.03
HMGN1-202ENST00000380747 NCLNQ969V3 563 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 PPWD1Q96BP3 646 aaKnown RBP8.61□□□□□ -1.03
HMGN1-202ENST00000380747 VMP1Q96GC9 406 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 APIPQ96GX9 242 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 PKNOX2Q96KN3 472 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 PAIP2Q9BPZ3 127 aaKnown RBP8.61□□□□□ -1.03
HMGN1-202ENST00000380747 FAIM2Q9BWQ8 316 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 EBPLQ9BY08 206 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 DEFB126Q9BYW3 111 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 OR8D2Q9GZM6 311 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.61□□□□□ -1.03
HMGN1-202ENST00000380747 CDCP1Q9H5V8 836 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 SSU72Q9NP77 194 aaKnown RBP8.61□□□□□ -1.03
HMGN1-202ENST00000380747 GMPR2Q9P2T1 348 aaKnown RBP8.61□□□□□ -1.03
HMGN1-202ENST00000380747 VTI1BQ9UEU0 232 aa8.61□□□□□ -1.03
HMGN1-202ENST00000380747 APCP25054 2843 aa8.6□□□□□ -1.03
HMGN1-202ENST00000380747 GNG14A0A1W2PPG7 69 aa8.6□□□□□ -1.03
HMGN1-202ENST00000380747 C1orf226A1L170 272 aa8.6□□□□□ -1.03
HMGN1-202ENST00000380747 SLC28A1O00337 649 aa8.6□□□□□ -1.03
HMGN1-202ENST00000380747 PGRMC2O15173 223 aa8.6□□□□□ -1.03
HMGN1-202ENST00000380747 DYRK3O43781 588 aa8.6□□□□□ -1.03
HMGN1-202ENST00000380747 VPS4BO75351 444 aa8.6□□□□□ -1.03
HMGN1-202ENST00000380747 SORBS2O94875 1100 aaKnown RBP8.6□□□□□ -1.03
HMGN1-202ENST00000380747 CHEK2O96017 543 aa8.6□□□□□ -1.03
HMGN1-202ENST00000380747 PIK3R1P27986 724 aa8.6□□□□□ -1.03
HMGN1-202ENST00000380747 ETV4P43268 484 aa8.6□□□□□ -1.03
HMGN1-202ENST00000380747 ALDH9A1P49189 494 aa8.6□□□□□ -1.03
HMGN1-202ENST00000380747 IDH3AP50213 366 aa8.6□□□□□ -1.03
HMGN1-202ENST00000380747 CLCN2P51788 898 aa8.6□□□□□ -1.03
HMGN1-202ENST00000380747 IGLV3-21P80748 117 aaPredicted RBP8.6□□□□□ -1.03
HMGN1-202ENST00000380747 PLIN5Q00G26 463 aa8.6□□□□□ -1.03
HMGN1-202ENST00000380747 OC90Q02509 493 aaPredicted RBP8.6□□□□□ -1.03
HMGN1-202ENST00000380747 ZNF169Q14929 603 aaPredicted RBP8.6□□□□□ -1.03
HMGN1-202ENST00000380747 INPP5JQ15735 1006 aaPredicted RBP8.6□□□□□ -1.03
HMGN1-202ENST00000380747 PRR30Q53SZ7 412 aaPredicted RBP8.6□□□□□ -1.03
HMGN1-202ENST00000380747 TNFAIP8L3Q5GJ75 292 aa8.6□□□□□ -1.03
HMGN1-202ENST00000380747 SH2D4BQ5SQS7 431 aa8.6□□□□□ -1.03
HMGN1-202ENST00000380747 H3F3CQ6NXT2 135 aa8.6□□□□□ -1.03
HMGN1-202ENST00000380747 Q6ZS92 163 aa8.6□□□□□ -1.03
HMGN1-202ENST00000380747 BTLAQ7Z6A9 289 aa8.6□□□□□ -1.03
HMGN1-202ENST00000380747 RPS19BP1Q86WX3 136 aaKnown RBP8.6□□□□□ -1.03
HMGN1-202ENST00000380747 MMP21Q8N119 569 aa8.6□□□□□ -1.03
HMGN1-202ENST00000380747 Q8NA96 180 aa8.6□□□□□ -1.03
HMGN1-202ENST00000380747 APCDD1LQ8NCL9 501 aa8.6□□□□□ -1.03
HMGN1-202ENST00000380747 MORN4Q8NDC4 146 aa8.6□□□□□ -1.03
HMGN1-202ENST00000380747 OR4K14Q8NGD5 310 aa8.6□□□□□ -1.03
HMGN1-202ENST00000380747 OR1N1Q8NGS0 311 aa8.6□□□□□ -1.03
HMGN1-202ENST00000380747 OR14A16Q8NHC5 309 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms