RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 AMBRA1Q9C0C7 1298 aa18.71■□□□□ 0.59
PDLIM5-205ENST00000380180 GABARAPL1Q9H0R8 117 aa18.71■□□□□ 0.59
PDLIM5-205ENST00000380180 STARD5Q9NSY2 213 aa18.71■□□□□ 0.59
PDLIM5-205ENST00000380180 TRPC4Q9UBN4 977 aa18.71■□□□□ 0.59
PDLIM5-205ENST00000380180 ZNF860A6NHJ4 632 aa18.71■□□□□ 0.59
PDLIM5-205ENST00000380180 TFAP2AP05549 437 aa18.71■□□□□ 0.59
PDLIM5-205ENST00000380180 RXRGP48443 463 aa18.71■□□□□ 0.59
PDLIM5-205ENST00000380180 HNRNPKP61978 463 aaKnown RBP eCLIP18.71■□□□□ 0.59
PDLIM5-205ENST00000380180 DMWDQ09019 674 aa18.71■□□□□ 0.59
PDLIM5-205ENST00000380180 EPS8Q12929 822 aa18.71■□□□□ 0.59
PDLIM5-205ENST00000380180 APOFQ13790 326 aa18.71■□□□□ 0.59
PDLIM5-205ENST00000380180 DEFB133Q30KQ1 61 aa18.71■□□□□ 0.59
PDLIM5-205ENST00000380180 FOXB2Q5VYV0 432 aa18.71■□□□□ 0.59
PDLIM5-205ENST00000380180 CYP4Z1Q86W10 505 aa18.71■□□□□ 0.59
PDLIM5-205ENST00000380180 ARMC8Q8IUR7 673 aa18.71■□□□□ 0.59
PDLIM5-205ENST00000380180 ZNF786Q8N393 782 aa18.71■□□□□ 0.59
PDLIM5-205ENST00000380180 CSNK1A1LQ8N752 337 aa18.71■□□□□ 0.59
PDLIM5-205ENST00000380180 AVL9Q8NBF6 648 aa18.71■□□□□ 0.59
PDLIM5-205ENST00000380180 TSPAN14Q8NG11 270 aa18.71■□□□□ 0.59
PDLIM5-205ENST00000380180 OR9A2Q8NGT5 310 aa18.71■□□□□ 0.59
PDLIM5-205ENST00000380180 SFXN5Q8TD22 340 aa18.71■□□□□ 0.59
PDLIM5-205ENST00000380180 NRBF2Q96F24 287 aa18.71■□□□□ 0.59
PDLIM5-205ENST00000380180 CSF3RQ99062 836 aa18.71■□□□□ 0.59
PDLIM5-205ENST00000380180 CLK4Q9HAZ1 481 aaKnown RBP18.71■□□□□ 0.59
PDLIM5-205ENST00000380180 PDP1Q9P0J1 537 aaPredicted RBP18.71■□□□□ 0.59
PDLIM5-205ENST00000380180 C3orf18Q9UK00 162 aa18.71■□□□□ 0.59
PDLIM5-205ENST00000380180 SH3GLB1Q9Y371 365 aa18.71■□□□□ 0.59
PDLIM5-205ENST00000380180 COL6A3P12111 3177 aa18.7■□□□□ 0.58
PDLIM5-205ENST00000380180 PRAMEF27A3QJZ7 478 aa18.7■□□□□ 0.58
PDLIM5-205ENST00000380180 C19orf67A6NJJ6 358 aa18.7■□□□□ 0.58
PDLIM5-205ENST00000380180 SDC3O75056 442 aa18.7■□□□□ 0.58
PDLIM5-205ENST00000380180 HMGN2P05204 90 aaKnown RBP18.7■□□□□ 0.58
PDLIM5-205ENST00000380180 RRM2P31350 389 aa18.7■□□□□ 0.58
PDLIM5-205ENST00000380180 DAPP51397 102 aa18.7■□□□□ 0.58
PDLIM5-205ENST00000380180 KCNAB2Q13303 367 aa18.7■□□□□ 0.58
PDLIM5-205ENST00000380180 SYPL1Q16563 259 aa18.7■□□□□ 0.58
PDLIM5-205ENST00000380180 TTC23Q5W5X9 447 aa18.7■□□□□ 0.58
PDLIM5-205ENST00000380180 KLHL35Q6PF15 583 aa18.7■□□□□ 0.58
PDLIM5-205ENST00000380180 BHLHB9Q6PI77 547 aa18.7■□□□□ 0.58
PDLIM5-205ENST00000380180 ELP4Q96EB1 424 aa18.7■□□□□ 0.58
PDLIM5-205ENST00000380180 CCDC3Q9BQI4 270 aa18.7■□□□□ 0.58
PDLIM5-205ENST00000380180 YIPF4Q9BSR8 244 aa18.7■□□□□ 0.58
PDLIM5-205ENST00000380180 THUMPD1Q9NXG2 353 aaKnown RBP18.7■□□□□ 0.58
PDLIM5-205ENST00000380180 MS4A12Q9NXJ0 267 aa18.7■□□□□ 0.58
PDLIM5-205ENST00000380180 PCDHGB3Q9Y5G1 929 aa18.7■□□□□ 0.58
PDLIM5-205ENST00000380180 SLC22A7Q9Y694 548 aa18.7■□□□□ 0.58
PDLIM5-205ENST00000380180 CABIN1Q9Y6J0 2220 aa18.7■□□□□ 0.58
PDLIM5-205ENST00000380180 FHP07954 510 aa18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 TLX1P31314 330 aaPredicted RBP18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 PIGAP37287 484 aa18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 MC3RP41968 323 aa18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 SIM1P81133 766 aaPredicted RBP18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 LASP1Q14847 261 aaKnown RBP18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 DEFB110Q30KQ9 67 aa18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 SHISA5Q8N114 240 aa18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 C19orf47Q8N9M1 422 aaKnown RBP18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 ZNF555Q8NEP9 628 aa18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 GEMIN6Q8WXD5 167 aaKnown RBP18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 DNASE2BQ8WZ79 361 aa18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 MOAP1Q96BY2 351 aa18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 ZNF300Q96RE9 604 aaPredicted RBP18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 SLC38A3Q99624 504 aa18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 EPYCQ99645 322 aa18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 ANKRA2Q9H9E1 313 aa18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 UCK1Q9HA47 277 aa18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 THSD1Q9NS62 852 aa18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 THEGQ9P2T0 379 aa18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 P2RX2Q9UBL9 471 aa18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 ORC6Q9Y5N6 252 aa18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 TMEM247A6NEH6 219 aa18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 SLC9B1P1A6NJY1 282 aa18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 LMO7DNF2Z398 122 aa18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 EMC8O43402 210 aa18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 SLC28A2O43868 658 aa18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 MITFO75030 526 aaPredicted RBP18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 MFN2O95140 757 aa18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 YAP1P46937 504 aaKnown RBP18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 XKP51811 444 aa18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 RAD23AP54725 363 aa18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 LTB4RQ15722 352 aa18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 LIN52Q52LA3 116 aa18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 C17orf82Q86X59 251 aaPredicted RBP18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 OR4N5Q8IXE1 308 aa18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 OR4K14Q8NGD5 310 aa18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 OR56A1Q8NGH5 318 aa18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 KAT2AQ92830 837 aa18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 OTUB1Q96FW1 271 aaPredicted RBP18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 ZNF347Q96SE7 839 aa18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 RSPO3Q9BXY4 272 aaPredicted RBP18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 LYRM4Q9HD34 91 aa18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 UCKL1Q9NWZ5 548 aa18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 NAALAD2Q9Y3Q0 740 aa18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 TESMINQ9Y4I5 508 aa18.69■□□□□ 0.58
PDLIM5-205ENST00000380180 LAMA1P25391 3075 aa18.68■□□□□ 0.58
PDLIM5-205ENST00000380180 PROS1P07225 676 aa18.68■□□□□ 0.58
PDLIM5-205ENST00000380180 CTSBP07858 339 aa18.68■□□□□ 0.58
PDLIM5-205ENST00000380180 IGFBP5P24593 272 aa18.68■□□□□ 0.58
PDLIM5-205ENST00000380180 POLR2IP36954 125 aaKnown RBP18.68■□□□□ 0.58
PDLIM5-205ENST00000380180 PI4KAP42356 2102 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms