RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 SPATA19Q7Z5L4 167 aa11.13□□□□□ -0.63
PCNA-201ENST00000379143 TICAM1Q8IUC6 712 aa11.13□□□□□ -0.63
PCNA-201ENST00000379143 LRRC25Q8N386 305 aaPredicted RBP11.13□□□□□ -0.63
PCNA-201ENST00000379143 NATD1Q8N6N6 113 aa11.13□□□□□ -0.63
PCNA-201ENST00000379143 CEP70Q8NHQ1 597 aa11.13□□□□□ -0.63
PCNA-201ENST00000379143 ACTRT2Q8TDY3 377 aa11.13□□□□□ -0.63
PCNA-201ENST00000379143 PTPMT1Q8WUK0 201 aaPredicted RBP11.13□□□□□ -0.63
PCNA-201ENST00000379143 RIT1Q92963 219 aa11.13□□□□□ -0.63
PCNA-201ENST00000379143 VMP1Q96GC9 406 aa11.13□□□□□ -0.63
PCNA-201ENST00000379143 THOC3Q96J01 351 aaKnown RBP11.13□□□□□ -0.63
PCNA-201ENST00000379143 EGLN2Q96KS0 407 aa11.13□□□□□ -0.63
PCNA-201ENST00000379143 PRPF18Q99633 342 aaKnown RBP11.13□□□□□ -0.63
PCNA-201ENST00000379143 C1orf50Q9BV19 199 aa11.13□□□□□ -0.63
PCNA-201ENST00000379143 SLC25A23Q9BV35 468 aa11.13□□□□□ -0.63
PCNA-201ENST00000379143 TRIM55Q9BYV6 548 aa11.13□□□□□ -0.63
PCNA-201ENST00000379143 REEP4Q9H6H4 257 aa11.13□□□□□ -0.63
PCNA-201ENST00000379143 SLC35C2Q9NQQ7 365 aa11.13□□□□□ -0.63
PCNA-201ENST00000379143 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.13□□□□□ -0.63
PCNA-201ENST00000379143 TEKT2Q9UIF3 430 aa11.13□□□□□ -0.63
PCNA-201ENST00000379143 PCDHGB7Q9Y5F8 929 aa11.13□□□□□ -0.63
PCNA-201ENST00000379143 MYO18BQ8IUG5 2567 aa11.13□□□□□ -0.63
PCNA-201ENST00000379143 WASHC1A8K0Z3 465 aa11.12□□□□□ -0.63
PCNA-201ENST00000379143 A8MUA0 341 aa11.12□□□□□ -0.63
PCNA-201ENST00000379143 ZNF195O14628 629 aa11.12□□□□□ -0.63
PCNA-201ENST00000379143 TBX19O60806 448 aa11.12□□□□□ -0.63
PCNA-201ENST00000379143 DIAPH2O60879 1101 aa11.12□□□□□ -0.63
PCNA-201ENST00000379143 DNAJB5O75953 348 aa11.12□□□□□ -0.63
PCNA-201ENST00000379143 CLCN2P51788 898 aa11.12□□□□□ -0.63
PCNA-201ENST00000379143 GUCY1A3Q02108 690 aa11.12□□□□□ -0.63
PCNA-201ENST00000379143 Q0VFX4 171 aa11.12□□□□□ -0.63
PCNA-201ENST00000379143 CEBPEQ15744 281 aa11.12□□□□□ -0.63
PCNA-201ENST00000379143 VWA5B1Q5TIE3 1220 aa11.12□□□□□ -0.63
PCNA-201ENST00000379143 AGAP7PQ5VUJ5 663 aa11.12□□□□□ -0.63
PCNA-201ENST00000379143 NXNQ6DKJ4 435 aa11.12□□□□□ -0.63
PCNA-201ENST00000379143 EPGNQ6UW88 154 aa11.12□□□□□ -0.63
PCNA-201ENST00000379143 HPS6Q86YV9 775 aa11.12□□□□□ -0.63
PCNA-201ENST00000379143 MMP21Q8N119 569 aa11.12□□□□□ -0.63
PCNA-201ENST00000379143 LSM14AQ8ND56 463 aaKnown RBP11.12□□□□□ -0.63
PCNA-201ENST00000379143 NFAM1Q8NET5 270 aaPredicted RBP11.12□□□□□ -0.63
PCNA-201ENST00000379143 FDCSPQ8NFU4 85 aa11.12□□□□□ -0.63
PCNA-201ENST00000379143 OR1N1Q8NGS0 311 aa11.12□□□□□ -0.63
PCNA-201ENST00000379143 ELP5Q8TE02 316 aa11.12□□□□□ -0.63
PCNA-201ENST00000379143 STON2Q8WXE9 905 aa11.12□□□□□ -0.63
PCNA-201ENST00000379143 UCN3Q969E3 161 aa11.12□□□□□ -0.63
PCNA-201ENST00000379143 EXOSC8Q96B26 276 aaKnown RBP11.12□□□□□ -0.63
PCNA-201ENST00000379143 PPCDCQ96CD2 204 aa11.12□□□□□ -0.63
PCNA-201ENST00000379143 CNRIP1Q96F85 164 aaPredicted RBP11.12□□□□□ -0.63
PCNA-201ENST00000379143 FBXL20Q96IG2 436 aa11.12□□□□□ -0.63
PCNA-201ENST00000379143 ZNF681Q96N22 645 aa11.12□□□□□ -0.63
PCNA-201ENST00000379143 AGAP4Q96P64 663 aa11.12□□□□□ -0.63
PCNA-201ENST00000379143 WDR55Q9H6Y2 383 aaPredicted RBP11.12□□□□□ -0.63
PCNA-201ENST00000379143 ATAD3AQ9NVI7 634 aa11.12□□□□□ -0.63
PCNA-201ENST00000379143 C5AR2Q9P296 337 aa11.12□□□□□ -0.63
PCNA-201ENST00000379143 COPS7AQ9UBW8 275 aa11.12□□□□□ -0.63
PCNA-201ENST00000379143 BAIAP2L1Q9UHR4 511 aa11.12□□□□□ -0.63
PCNA-201ENST00000379143 GOLGA8QA0A0J9YX86 632 aa11.11□□□□□ -0.63
PCNA-201ENST00000379143 MYOCOSA0A1B0GUC4 107 aa11.11□□□□□ -0.63
PCNA-201ENST00000379143 GOLGA8OA6NCC3 632 aa11.11□□□□□ -0.63
PCNA-201ENST00000379143 A6NL46 340 aa11.11□□□□□ -0.63
PCNA-201ENST00000379143 GOLGA8NF8WBI6 632 aa11.11□□□□□ -0.63
PCNA-201ENST00000379143 ATXN7O15265 892 aaPredicted RBP11.11□□□□□ -0.63
PCNA-201ENST00000379143 POLR3GO15318 223 aaPredicted RBP11.11□□□□□ -0.63
PCNA-201ENST00000379143 SLITRK5O94991 958 aa11.11□□□□□ -0.63
PCNA-201ENST00000379143 VIMP08670 466 aaKnown RBP11.11□□□□□ -0.63
PCNA-201ENST00000379143 G6PDP11413 515 aa11.11□□□□□ -0.63
PCNA-201ENST00000379143 PLA2G2AP14555 144 aa11.11□□□□□ -0.63
PCNA-201ENST00000379143 IDO1P14902 403 aa11.11□□□□□ -0.63
PCNA-201ENST00000379143 NT5EP21589 574 aa11.11□□□□□ -0.63
PCNA-201ENST00000379143 NTSP30990 170 aa11.11□□□□□ -0.63
PCNA-201ENST00000379143 FEN1P39748 380 aaKnown RBP11.11□□□□□ -0.63
PCNA-201ENST00000379143 GPR143P51810 404 aa11.11□□□□□ -0.63
PCNA-201ENST00000379143 PGDP52209 483 aa11.11□□□□□ -0.63
PCNA-201ENST00000379143 AQP5P55064 265 aa11.11□□□□□ -0.63
PCNA-201ENST00000379143 CLDN8P56748 225 aa11.11□□□□□ -0.63
PCNA-201ENST00000379143 C21orf58P58505 322 aa11.11□□□□□ -0.63
PCNA-201ENST00000379143 IRX1P78414 480 aaPredicted RBP11.11□□□□□ -0.63
PCNA-201ENST00000379143 PDE7AQ13946 482 aa11.11□□□□□ -0.63
PCNA-201ENST00000379143 PTGR1Q14914 329 aa11.11□□□□□ -0.63
PCNA-201ENST00000379143 SLC9B1Q4ZJI4 515 aa11.11□□□□□ -0.63
PCNA-201ENST00000379143 CRB2Q5IJ48 1285 aa11.11□□□□□ -0.63
PCNA-201ENST00000379143 TCTN3Q6NUS6 607 aa11.11□□□□□ -0.63
PCNA-201ENST00000379143 MAVSQ7Z434 540 aa11.11□□□□□ -0.63
PCNA-201ENST00000379143 GALNT12Q8IXK2 581 aa11.11□□□□□ -0.63
PCNA-201ENST00000379143 SLC5A8Q8N695 610 aa11.11□□□□□ -0.63
PCNA-201ENST00000379143 APCDD1LQ8NCL9 501 aa11.11□□□□□ -0.63
PCNA-201ENST00000379143 OR8K3Q8NH51 312 aa11.11□□□□□ -0.63
PCNA-201ENST00000379143 CLHC1Q8NHS4 586 aa11.11□□□□□ -0.63
PCNA-201ENST00000379143 SLC2A12Q8TD20 617 aa11.11□□□□□ -0.63
PCNA-201ENST00000379143 TM9SF4Q92544 642 aa11.11□□□□□ -0.63
PCNA-201ENST00000379143 GFM2Q969S9 779 aaKnown RBP11.11□□□□□ -0.63
PCNA-201ENST00000379143 PPWD1Q96BP3 646 aaKnown RBP11.11□□□□□ -0.63
PCNA-201ENST00000379143 ABHD17AQ96GS6 310 aa11.11□□□□□ -0.63
PCNA-201ENST00000379143 SENP5Q96HI0 755 aaPredicted RBP11.11□□□□□ -0.63
PCNA-201ENST00000379143 BBS4Q96RK4 519 aa11.11□□□□□ -0.63
PCNA-201ENST00000379143 SMAD5Q99717 465 aaKnown RBP11.11□□□□□ -0.63
PCNA-201ENST00000379143 SEMA4CQ9C0C4 833 aa11.11□□□□□ -0.63
PCNA-201ENST00000379143 OR8D2Q9GZM6 311 aa11.11□□□□□ -0.63
PCNA-201ENST00000379143 CXorf21Q9HAI6 301 aa11.11□□□□□ -0.63
PCNA-201ENST00000379143 KCNK13Q9HB14 408 aa11.11□□□□□ -0.63
PCNA-201ENST00000379143 SH3BP4Q9P0V3 963 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms