RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 SLC46A1Q96NT5 459 aa14.8□□□□□ -0.04
CCDC107-204ENST00000378409 SLC39A3Q9BRY0 314 aa14.8□□□□□ -0.04
CCDC107-204ENST00000378409 ALOXE3Q9BYJ1 711 aa14.8□□□□□ -0.04
CCDC107-204ENST00000378409 SPRY4Q9C004 299 aa14.8□□□□□ -0.04
CCDC107-204ENST00000378409 VN1R1Q9GZP7 353 aa14.8□□□□□ -0.04
CCDC107-204ENST00000378409 SLC26A1Q9H2B4 701 aa14.8□□□□□ -0.04
CCDC107-204ENST00000378409 NECTIN3Q9NQS3 549 aa14.8□□□□□ -0.04
CCDC107-204ENST00000378409 SLC6A13Q9NSD5 602 aa14.8□□□□□ -0.04
CCDC107-204ENST00000378409 NDE1Q9NXR1 346 aa14.8□□□□□ -0.04
CCDC107-204ENST00000378409 TAS2R1Q9NYW7 299 aa14.8□□□□□ -0.04
CCDC107-204ENST00000378409 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.8□□□□□ -0.04
CCDC107-204ENST00000378409 CROTQ9UKG9 612 aa14.8□□□□□ -0.04
CCDC107-204ENST00000378409 PADI1Q9ULC6 663 aa14.8□□□□□ -0.04
CCDC107-204ENST00000378409 SNX8Q9Y5X2 465 aa14.8□□□□□ -0.04
CCDC107-204ENST00000378409 VSTM2BA6NLU5 285 aa14.79□□□□□ -0.04
CCDC107-204ENST00000378409 FXYD1O00168 92 aa14.79□□□□□ -0.04
CCDC107-204ENST00000378409 GYG2O15488 501 aa14.79□□□□□ -0.04
CCDC107-204ENST00000378409 CNOT3O75175 753 aaKnown RBP14.79□□□□□ -0.04
CCDC107-204ENST00000378409 HEXBP07686 556 aa14.79□□□□□ -0.04
CCDC107-204ENST00000378409 SLC35E2P0CK97 266 aa14.79□□□□□ -0.04
CCDC107-204ENST00000378409 PTPN4P29074 926 aa14.79□□□□□ -0.04
CCDC107-204ENST00000378409 PTPN6P29350 595 aa14.79□□□□□ -0.04
CCDC107-204ENST00000378409 CPOXP36551 454 aa14.79□□□□□ -0.04
CCDC107-204ENST00000378409 CDK9P50750 372 aaKnown RBP14.79□□□□□ -0.04
CCDC107-204ENST00000378409 PSME3P61289 254 aa14.79□□□□□ -0.04
CCDC107-204ENST00000378409 IGLV3-21P80748 117 aaPredicted RBP14.79□□□□□ -0.04
CCDC107-204ENST00000378409 FOXC1Q12948 553 aa14.79□□□□□ -0.04
CCDC107-204ENST00000378409 SERTAD2Q14140 314 aa14.79□□□□□ -0.04
CCDC107-204ENST00000378409 NCF4Q15080 339 aa14.79□□□□□ -0.04
CCDC107-204ENST00000378409 LTB4RQ15722 352 aa14.79□□□□□ -0.04
CCDC107-204ENST00000378409 GTDC1Q4AE62 458 aa14.79□□□□□ -0.04
CCDC107-204ENST00000378409 LRIF1Q5T3J3 769 aa14.79□□□□□ -0.04
CCDC107-204ENST00000378409 MSRB3Q8IXL7 192 aa14.79□□□□□ -0.04
CCDC107-204ENST00000378409 ESX1Q8N693 406 aa14.79□□□□□ -0.04
CCDC107-204ENST00000378409 OR9A2Q8NGT5 310 aa14.79□□□□□ -0.04
CCDC107-204ENST00000378409 GOT1L1Q8NHS2 421 aaPredicted RBP14.79□□□□□ -0.04
CCDC107-204ENST00000378409 PPWD1Q96BP3 646 aaKnown RBP14.79□□□□□ -0.04
CCDC107-204ENST00000378409 DGAT2Q96PD7 388 aa14.79□□□□□ -0.04
CCDC107-204ENST00000378409 CGREF1Q99674 301 aa14.79□□□□□ -0.04
CCDC107-204ENST00000378409 BTBD10Q9BSF8 475 aa14.79□□□□□ -0.04
CCDC107-204ENST00000378409 CXorf36Q9H7Y0 433 aa14.79□□□□□ -0.04
CCDC107-204ENST00000378409 WDR54Q9H977 334 aa14.79□□□□□ -0.04
CCDC107-204ENST00000378409 NEUROD4Q9HD90 331 aa14.79□□□□□ -0.04
CCDC107-204ENST00000378409 ERVK-11Q9UQG0 969 aa14.79□□□□□ -0.04
CCDC107-204ENST00000378409 PCDHB14Q9Y5E9 798 aa14.79□□□□□ -0.04
CCDC107-204ENST00000378409 CLDN16Q9Y5I7 305 aa14.79□□□□□ -0.04
CCDC107-204ENST00000378409 IGKV3D-11A0A0A0MRZ8 115 aa14.78□□□□□ -0.04
CCDC107-204ENST00000378409 CDRT15L2A8MXV6 281 aa14.78□□□□□ -0.04
CCDC107-204ENST00000378409 IDSB3KWA1 339 aa14.78□□□□□ -0.04
CCDC107-204ENST00000378409 RECKO95980 971 aa14.78□□□□□ -0.04
CCDC107-204ENST00000378409 IFNA16P05015 189 aa14.78□□□□□ -0.04
CCDC107-204ENST00000378409 ATP1B1P05026 303 aa14.78□□□□□ -0.04
CCDC107-204ENST00000378409 ZCCHC18P0CG32 403 aa14.78□□□□□ -0.04
CCDC107-204ENST00000378409 HOXB9P17482 250 aaPredicted RBP14.78□□□□□ -0.04
CCDC107-204ENST00000378409 NT5EP21589 574 aa14.78□□□□□ -0.04
CCDC107-204ENST00000378409 STT3AP46977 705 aa14.78□□□□□ -0.04
CCDC107-204ENST00000378409 EFNA3P52797 238 aa14.78□□□□□ -0.04
CCDC107-204ENST00000378409 GAB1Q13480 694 aa14.78□□□□□ -0.04
CCDC107-204ENST00000378409 MAP7Q14244 749 aa14.78□□□□□ -0.04
CCDC107-204ENST00000378409 NSDHLQ15738 373 aa14.78□□□□□ -0.04
CCDC107-204ENST00000378409 SPDYE7PQ495Y7 208 aa14.78□□□□□ -0.04
CCDC107-204ENST00000378409 FAAH2Q6GMR7 532 aa14.78□□□□□ -0.04
CCDC107-204ENST00000378409 TMEM107Q6UX40 140 aa14.78□□□□□ -0.04
CCDC107-204ENST00000378409 TMEM151BQ8IW70 566 aa14.78□□□□□ -0.04
CCDC107-204ENST00000378409 DEFB107AQ8IZN7 70 aa14.78□□□□□ -0.04
CCDC107-204ENST00000378409 ST13P4Q8IZP2 240 aaPredicted RBP14.78□□□□□ -0.04
CCDC107-204ENST00000378409 NLGN4XQ8N0W4 816 aa14.78□□□□□ -0.04
CCDC107-204ENST00000378409 PGAM4Q8N0Y7 254 aa14.78□□□□□ -0.04
CCDC107-204ENST00000378409 CLEC4FQ8N1N0 589 aa14.78□□□□□ -0.04
CCDC107-204ENST00000378409 TRIML2Q8N7C3 387 aa14.78□□□□□ -0.04
CCDC107-204ENST00000378409 ADCY4Q8NFM4 1077 aa14.78□□□□□ -0.04
CCDC107-204ENST00000378409 NLGN4YQ8NFZ3 816 aaPredicted RBP14.78□□□□□ -0.04
CCDC107-204ENST00000378409 OR5AK3PQ8NH89 298 aa14.78□□□□□ -0.04
CCDC107-204ENST00000378409 CT55Q8WUE5 264 aa14.78□□□□□ -0.04
CCDC107-204ENST00000378409 KAT2AQ92830 837 aa14.78□□□□□ -0.04
CCDC107-204ENST00000378409 RBM18Q96H35 190 aaKnown RBP14.78□□□□□ -0.04
CCDC107-204ENST00000378409 SPSB2Q99619 263 aa14.78□□□□□ -0.04
CCDC107-204ENST00000378409 CRB3Q9BUF7 120 aa14.78□□□□□ -0.04
CCDC107-204ENST00000378409 TRIM8Q9BZR9 551 aa14.78□□□□□ -0.04
CCDC107-204ENST00000378409 C1orf21Q9H246 121 aa14.78□□□□□ -0.04
CCDC107-204ENST00000378409 LRMDAQ9H2I8 198 aa14.78□□□□□ -0.04
CCDC107-204ENST00000378409 SEMA3GQ9NS98 782 aa14.78□□□□□ -0.04
CCDC107-204ENST00000378409 SIRT3Q9NTG7 399 aaPredicted RBP14.78□□□□□ -0.04
CCDC107-204ENST00000378409 SLC25A37Q9NYZ2 338 aa14.78□□□□□ -0.04
CCDC107-204ENST00000378409 VAPAQ9P0L0 249 aa14.78□□□□□ -0.04
CCDC107-204ENST00000378409 C3orf18Q9UK00 162 aa14.78□□□□□ -0.04
CCDC107-204ENST00000378409 NXT1Q9UKK6 140 aaKnown RBP14.78□□□□□ -0.04
CCDC107-204ENST00000378409 PCDHGA7Q9Y5G6 932 aa14.78□□□□□ -0.04
CCDC107-204ENST00000378409 AHCTF1Q8WYP5 2266 aa14.77□□□□□ -0.04
CCDC107-204ENST00000378409 TRBV5-3A0A0A0MS03 114 aa14.77□□□□□ -0.05
CCDC107-204ENST00000378409 RNF103-CHMP3A0A140T963 221 aa14.77□□□□□ -0.05
CCDC107-204ENST00000378409 MED19A0JLT2 244 aaPredicted RBP14.77□□□□□ -0.05
CCDC107-204ENST00000378409 STMND1H3BQB6 276 aa14.77□□□□□ -0.05
CCDC107-204ENST00000378409 RAD1O60671 282 aa14.77□□□□□ -0.05
CCDC107-204ENST00000378409 TCN2P20062 427 aa14.77□□□□□ -0.05
CCDC107-204ENST00000378409 UQCRC2P22695 453 aa14.77□□□□□ -0.05
CCDC107-204ENST00000378409 CHI3L1P36222 383 aaPredicted RBP14.77□□□□□ -0.05
CCDC107-204ENST00000378409 MC3RP41968 323 aa14.77□□□□□ -0.05
CCDC107-204ENST00000378409 EMP2P54851 167 aa14.77□□□□□ -0.05
CCDC107-204ENST00000378409 MRPS35P82673 323 aaKnown RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms