RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 CLCA3PQ9Y6N3 262 aa17.08■□□□□ 0.33
GNE-201ENST00000377902 DNAH14Q0VDD8 3507 aa17.08■□□□□ 0.32
GNE-201ENST00000377902 ARRDC5A6NEK1 342 aa17.08■□□□□ 0.32
GNE-201ENST00000377902 M0R3H8 397 aa17.08■□□□□ 0.32
GNE-201ENST00000377902 LEFTY1O75610 366 aa17.08■□□□□ 0.32
GNE-201ENST00000377902 H1F0P07305 194 aaKnown RBP17.08■□□□□ 0.32
GNE-201ENST00000377902 C1GALT1C1LP0DN25 315 aa17.08■□□□□ 0.32
GNE-201ENST00000377902 POLR2EP19388 210 aaKnown RBP17.08■□□□□ 0.32
GNE-201ENST00000377902 PTGER1P34995 402 aa17.08■□□□□ 0.32
GNE-201ENST00000377902 C1DQ13901 141 aaKnown RBP17.08■□□□□ 0.32
GNE-201ENST00000377902 INSL4Q14641 139 aa17.08■□□□□ 0.32
GNE-201ENST00000377902 P2RY14Q15391 338 aa17.08■□□□□ 0.32
GNE-201ENST00000377902 FAM209AQ5JX71 171 aa17.08■□□□□ 0.32
GNE-201ENST00000377902 HENMT1Q5T8I9 393 aaKnown RBP17.08■□□□□ 0.32
GNE-201ENST00000377902 ZDHHC20Q5W0Z9 365 aa17.08■□□□□ 0.32
GNE-201ENST00000377902 YIPF7Q8N8F6 280 aa17.08■□□□□ 0.32
GNE-201ENST00000377902 FAM181AQ8N9Y4 354 aa17.08■□□□□ 0.32
GNE-201ENST00000377902 JPH3Q8WXH2 748 aaPredicted RBP17.08■□□□□ 0.32
GNE-201ENST00000377902 REPS1Q96D71 796 aa17.08■□□□□ 0.32
GNE-201ENST00000377902 MSLNLQ96KJ4 702 aa17.08■□□□□ 0.32
GNE-201ENST00000377902 IL17FQ96PD4 163 aa17.08■□□□□ 0.32
GNE-201ENST00000377902 DCLRE1CQ96SD1 692 aaKnown RBP17.08■□□□□ 0.32
GNE-201ENST00000377902 KATNB1Q9BVA0 655 aa17.08■□□□□ 0.32
GNE-201ENST00000377902 GPBP1L1Q9HC44 474 aaPredicted RBP17.08■□□□□ 0.32
GNE-201ENST00000377902 MYNNQ9NPC7 610 aa17.08■□□□□ 0.32
GNE-201ENST00000377902 MRPL17Q9NRX2 175 aaKnown RBP17.08■□□□□ 0.32
GNE-201ENST00000377902 HCN2Q9UL51 889 aa17.08■□□□□ 0.32
GNE-201ENST00000377902 PLAGL1Q9UM63 463 aa17.08■□□□□ 0.32
GNE-201ENST00000377902 GPR52Q9Y2T5 361 aa17.08■□□□□ 0.32
GNE-201ENST00000377902 A0A0X1KG70 313 aa17.07■□□□□ 0.32
GNE-201ENST00000377902 ATG13O75143 517 aa17.07■□□□□ 0.32
GNE-201ENST00000377902 NCR1O76036 304 aa17.07■□□□□ 0.32
GNE-201ENST00000377902 CCNYL3P0C7X3 344 aa17.07■□□□□ 0.32
GNE-201ENST00000377902 WDR5P61964 334 aaKnown RBP17.07■□□□□ 0.32
GNE-201ENST00000377902 CHRNEQ04844 493 aa17.07■□□□□ 0.32
GNE-201ENST00000377902 EFR3AQ14156 821 aa17.07■□□□□ 0.32
GNE-201ENST00000377902 SYT14P1Q58G82 188 aa17.07■□□□□ 0.32
GNE-201ENST00000377902 ARSIQ5FYB1 569 aa17.07■□□□□ 0.32
GNE-201ENST00000377902 HTR3DQ70Z44 454 aa17.07■□□□□ 0.32
GNE-201ENST00000377902 ZNF366Q8N895 744 aa17.07■□□□□ 0.32
GNE-201ENST00000377902 BTN2A2Q8WVV5 523 aa17.07■□□□□ 0.32
GNE-201ENST00000377902 MCOLN1Q9GZU1 580 aa17.07■□□□□ 0.32
GNE-201ENST00000377902 IRF2BPLQ9H1B7 796 aa17.07■□□□□ 0.32
GNE-201ENST00000377902 ANHXE9PGG2 379 aa17.07■□□□□ 0.32
GNE-201ENST00000377902 POLR1CO15160 346 aaPredicted RBP17.07■□□□□ 0.32
GNE-201ENST00000377902 AKR7A2O43488 359 aa17.07■□□□□ 0.32
GNE-201ENST00000377902 NTN1O95631 604 aa17.07■□□□□ 0.32
GNE-201ENST00000377902 PSKH1P11801 424 aa17.07■□□□□ 0.32
GNE-201ENST00000377902 E2F2Q14209 437 aa17.07■□□□□ 0.32
GNE-201ENST00000377902 TATDN3Q17R31 274 aa17.07■□□□□ 0.32
GNE-201ENST00000377902 CRTC2Q53ET0 693 aaPredicted RBP17.07■□□□□ 0.32
GNE-201ENST00000377902 SPOUT1Q5T280 376 aaKnown RBP17.07■□□□□ 0.32
GNE-201ENST00000377902 ADGRF3Q8IZF5 1079 aa17.07■□□□□ 0.32
GNE-201ENST00000377902 CYB5D2Q8WUJ1 264 aa17.07■□□□□ 0.32
GNE-201ENST00000377902 CITED4Q96RK1 184 aa17.07■□□□□ 0.32
GNE-201ENST00000377902 NDOR1Q9UHB4 597 aa17.07■□□□□ 0.32
GNE-201ENST00000377902 GOLGA4Q13439 2230 aaKnown RBP17.06■□□□□ 0.32
GNE-201ENST00000377902 A0A1W2PRU2 124 aa17.06■□□□□ 0.32
GNE-201ENST00000377902 ALPPP05187 535 aa17.06■□□□□ 0.32
GNE-201ENST00000377902 UQCRC2P22695 453 aa17.06■□□□□ 0.32
GNE-201ENST00000377902 SOX18P35713 384 aa17.06■□□□□ 0.32
GNE-201ENST00000377902 HTR2BP41595 481 aa17.06■□□□□ 0.32
GNE-201ENST00000377902 COL9A2Q14055 689 aaPredicted RBP17.06■□□□□ 0.32
GNE-201ENST00000377902 GINS1Q14691 196 aa17.06■□□□□ 0.32
GNE-201ENST00000377902 PODNL1Q6PEZ8 512 aa17.06■□□□□ 0.32
GNE-201ENST00000377902 SZRD1Q7Z422 152 aa17.06■□□□□ 0.32
GNE-201ENST00000377902 ENKURQ8TC29 256 aa17.06■□□□□ 0.32
GNE-201ENST00000377902 FOPNLQ96NB1 174 aa17.06■□□□□ 0.32
GNE-201ENST00000377902 PRR14Q9BWN1 585 aa17.06■□□□□ 0.32
GNE-201ENST00000377902 ACOXLQ9NUZ1 547 aa17.06■□□□□ 0.32
GNE-201ENST00000377902 PCDH10Q9P2E7 1040 aa17.06■□□□□ 0.32
GNE-201ENST00000377902 MGAT4BQ9UQ53 548 aa17.06■□□□□ 0.32
GNE-201ENST00000377902 DYRK1BQ9Y463 629 aa17.06■□□□□ 0.32
GNE-201ENST00000377902 SCN5AQ14524 2016 aa17.06■□□□□ 0.32
GNE-201ENST00000377902 THSD7BQ9C0I4 1608 aa17.06■□□□□ 0.32
GNE-201ENST00000377902 WASHC1A8K0Z3 465 aa17.06■□□□□ 0.32
GNE-201ENST00000377902 NEDD8-MDP1E9PL57 170 aa17.06■□□□□ 0.32
GNE-201ENST00000377902 FOXE1O00358 373 aaPredicted RBP17.06■□□□□ 0.32
GNE-201ENST00000377902 IL1AP01583 271 aa17.06■□□□□ 0.32
GNE-201ENST00000377902 OR12D1P0DN82 309 aa17.06■□□□□ 0.32
GNE-201ENST00000377902 CPEP16870 476 aa17.06■□□□□ 0.32
GNE-201ENST00000377902 VIPR1P32241 457 aa17.06■□□□□ 0.32
GNE-201ENST00000377902 IRS1P35568 1242 aa17.06■□□□□ 0.32
GNE-201ENST00000377902 MANFP55145 182 aaKnown RBP17.06■□□□□ 0.32
GNE-201ENST00000377902 SYPL1Q16563 259 aa17.06■□□□□ 0.32
GNE-201ENST00000377902 WASH2PQ6VEQ5 465 aa17.06■□□□□ 0.32
GNE-201ENST00000377902 OR5D16Q8NGK9 328 aa17.06■□□□□ 0.32
GNE-201ENST00000377902 ZNF582Q96NG8 517 aaPredicted RBP17.06■□□□□ 0.32
GNE-201ENST00000377902 SLA2Q9H6Q3 261 aa17.06■□□□□ 0.32
GNE-201ENST00000377902 B3GAT2Q9NPZ5 323 aa17.06■□□□□ 0.32
GNE-201ENST00000377902 PRAMEF27A3QJZ7 478 aa17.05■□□□□ 0.32
GNE-201ENST00000377902 LEFTY2O00292 366 aa17.05■□□□□ 0.32
GNE-201ENST00000377902 HPGDSO60760 199 aa17.05■□□□□ 0.32
GNE-201ENST00000377902 NME6O75414 186 aaPredicted RBP17.05■□□□□ 0.32
GNE-201ENST00000377902 MMP11P24347 488 aa17.05■□□□□ 0.32
GNE-201ENST00000377902 POLR2LP62875 67 aaKnown RBP17.05■□□□□ 0.32
GNE-201ENST00000377902 FABP5Q01469 135 aa17.05■□□□□ 0.32
GNE-201ENST00000377902 TAP2Q03519 686 aa17.05■□□□□ 0.32
GNE-201ENST00000377902 GRIN2CQ14957 1233 aa17.05■□□□□ 0.32
GNE-201ENST00000377902 DDI2Q5TDH0 399 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms