RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 ARFGAP1Q8N6T3 406 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 THAP6Q8TBB0 222 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 PNPLA2Q96AD5 504 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 MRGPRX3Q96LB0 322 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 WASF2Q9Y6W5 498 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 IGFALSP35858 605 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 ZNF460Q14592 562 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 DPPA2Q7Z7J5 298 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 GPATCH2Q9NW75 528 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 GAPDHSO14556 408 aaPredicted RBP4.71□□□□□ -1.65
PCDH9-201ENST00000377861 CHRM2P08172 466 aa4.71□□□□□ -1.65
PCDH9-201ENST00000377861 ZDHHC11BP0C7U3 371 aa4.71□□□□□ -1.65
PCDH9-201ENST00000377861 THEGLP0DJG4 465 aa4.71□□□□□ -1.65
PCDH9-201ENST00000377861 CORO1AP31146 461 aaKnown RBP4.71□□□□□ -1.65
PCDH9-201ENST00000377861 MS4A2Q01362 244 aa4.71□□□□□ -1.65
PCDH9-201ENST00000377861 CYP27C1Q4G0S4 372 aa4.71□□□□□ -1.65
PCDH9-201ENST00000377861 FAM199XQ6PEV8 388 aaPredicted RBP4.71□□□□□ -1.65
PCDH9-201ENST00000377861 TRBV5-4A0A0C4DH59 114 aa4.71□□□□□ -1.65
PCDH9-201ENST00000377861 ATP6V1G1O75348 118 aa4.71□□□□□ -1.65
PCDH9-201ENST00000377861 NDUFAF5Q5TEU4 345 aa4.71□□□□□ -1.65
PCDH9-201ENST00000377861 EEF1DP3Q658K8 133 aa4.71□□□□□ -1.65
PCDH9-201ENST00000377861 DLEU7Q6UYE1 221 aa4.71□□□□□ -1.65
PCDH9-201ENST00000377861 NDUFAF7Q7L592 441 aa4.71□□□□□ -1.65
PCDH9-201ENST00000377861 CD200R1Q8TD46 325 aa4.71□□□□□ -1.65
PCDH9-201ENST00000377861 RIPK3Q9Y572 518 aa4.71□□□□□ -1.65
PCDH9-201ENST00000377861 TNFRSF10BO14763 440 aa4.71□□□□□ -1.65
PCDH9-201ENST00000377861 USP12O75317 370 aa4.71□□□□□ -1.65
PCDH9-201ENST00000377861 SOD2P04179 222 aa4.71□□□□□ -1.65
PCDH9-201ENST00000377861 NFYAP23511 347 aaPredicted RBP4.71□□□□□ -1.65
PCDH9-201ENST00000377861 FMO3P31513 532 aa4.71□□□□□ -1.65
PCDH9-201ENST00000377861 TSPAN31Q12999 210 aa4.71□□□□□ -1.65
PCDH9-201ENST00000377861 ECH1Q13011 328 aa4.71□□□□□ -1.65
PCDH9-201ENST00000377861 TMEM205Q6UW68 189 aa4.71□□□□□ -1.65
PCDH9-201ENST00000377861 OR4K14Q8NGD5 310 aa4.71□□□□□ -1.65
PCDH9-201ENST00000377861 OR1J4Q8NGS1 313 aa4.71□□□□□ -1.65
PCDH9-201ENST00000377861 KHSRPQ92945 711 aaKnown RBP eCLIP4.71□□□□□ -1.65
PCDH9-201ENST00000377861 SLC25A46Q96AG3 418 aa4.71□□□□□ -1.65
PCDH9-201ENST00000377861 ZNF541Q9H0D2 1346 aa4.71□□□□□ -1.65
PCDH9-201ENST00000377861 IGLV3-27P01718 113 aa4.71□□□□□ -1.65
PCDH9-201ENST00000377861 GTF2E2P29084 291 aaKnown RBP4.71□□□□□ -1.65
PCDH9-201ENST00000377861 AFF1P51825 1210 aaKnown RBP4.71□□□□□ -1.65
PCDH9-201ENST00000377861 KCNE1BA0A087WTH5 132 aa4.71□□□□□ -1.65
PCDH9-201ENST00000377861 PCDH7O60245 1069 aa4.71□□□□□ -1.65
PCDH9-201ENST00000377861 C1QBP02746 253 aa4.71□□□□□ -1.65
PCDH9-201ENST00000377861 CYBAP13498 195 aa4.71□□□□□ -1.65
PCDH9-201ENST00000377861 RFX3P48380 749 aa4.71□□□□□ -1.65
PCDH9-201ENST00000377861 TMEM115Q12893 351 aaPredicted RBP4.71□□□□□ -1.65
PCDH9-201ENST00000377861 OR5L2Q8NGL0 311 aa4.71□□□□□ -1.65
PCDH9-201ENST00000377861 SPATA22Q8NHS9 363 aa4.71□□□□□ -1.65
PCDH9-201ENST00000377861 TCEAL4Q96EI5 215 aa4.71□□□□□ -1.65
PCDH9-201ENST00000377861 UBL7Q96S82 380 aaPredicted RBP4.71□□□□□ -1.65
PCDH9-201ENST00000377861 KIR2DS5A0A0G2JLQ3 304 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 A0A0G2JNG1 304 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 KIR2DS3K7RE56 304 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 RFXAPO00287 272 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 ZBTB7AO95365 584 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 ADCYAP1R1P41586 468 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 RPL38P63173 70 aaKnown RBP4.71□□□□□ -1.66
PCDH9-201ENST00000377861 KIR2DS5Q14953 304 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 AHSA2Q719I0 299 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 C10orf35Q96D05 121 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 SLC39A1Q9NY26 324 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 CBLCQ9ULV8 474 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 SLC7A11Q9UPY5 501 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 PLEKHM1Q9Y4G2 1056 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 ACP2P11117 423 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 CAP1Q01518 475 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 TUBB3Q13509 450 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 CDNFQ49AH0 187 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 RGMBQ6NW40 437 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 SHPRHQ149N8 1683 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 BORCS7-ASMTA0A0B4J1R7 106 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 PLD2O14939 933 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 MT-ATP6P00846 226 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 GALNSP34059 522 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 SPIBQ01892 262 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 MAD2L1BPQ15013 274 aaPredicted RBP4.71□□□□□ -1.66
PCDH9-201ENST00000377861 NXNL2Q5VZ03 156 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 C8orf82Q6P1X6 216 aaPredicted RBP4.71□□□□□ -1.66
PCDH9-201ENST00000377861 FGF20Q9NP95 211 aaPredicted RBP4.71□□□□□ -1.66
PCDH9-201ENST00000377861 OR2F2O95006 317 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 LMO2P25791 158 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 TIA1P31483 386 aaKnown RBP eCLIP4.71□□□□□ -1.66
PCDH9-201ENST00000377861 OR2F1Q13607 317 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 KLHL24Q6TFL4 600 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 OR2L2Q8NH16 312 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 XAGE5Q8WWM1 108 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 HSPA12BQ96MM6 686 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 GSDMCQ9BYG8 508 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 RNF13O43567 381 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 SFXN2Q96NB2 322 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 SLC35C2Q9NQQ7 365 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 WASH3PC4AMC7 463 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 STMND1H3BQB6 276 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 DBTP11182 482 aaKnown RBP4.71□□□□□ -1.66
PCDH9-201ENST00000377861 FPR3P25089 353 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 WASP42768 502 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 MRPL58Q14197 206 aaKnown RBP4.71□□□□□ -1.66
PCDH9-201ENST00000377861 PCYT2Q99447 389 aa4.71□□□□□ -1.66
PCDH9-201ENST00000377861 SLC35A5Q9BS91 424 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms