RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 QRFPRQ96P65 431 aa13.79□□□□□ -0.2
MSH5-201ENST00000375703 MVB12BQ9H7P6 319 aa13.79□□□□□ -0.2
MSH5-201ENST00000375703 SIAEQ9HAT2 523 aa13.79□□□□□ -0.2
MSH5-201ENST00000375703 MOV10Q9HCE1 1003 aaKnown RBP13.79□□□□□ -0.2
MSH5-201ENST00000375703 CUEDC1Q9NWM3 386 aaPredicted RBP13.79□□□□□ -0.2
MSH5-201ENST00000375703 STUB1Q9UNE7 303 aa13.79□□□□□ -0.2
MSH5-201ENST00000375703 PDE4DIPQ5VU43 2346 aa13.79□□□□□ -0.2
MSH5-201ENST00000375703 TLX2O43763 284 aaPredicted RBP13.79□□□□□ -0.2
MSH5-201ENST00000375703 HBQ1P09105 142 aa13.79□□□□□ -0.2
MSH5-201ENST00000375703 OR12D1P0DN82 309 aa13.79□□□□□ -0.2
MSH5-201ENST00000375703 DDX5P17844 614 aaKnown RBP13.79□□□□□ -0.2
MSH5-201ENST00000375703 ENDOUP21128 410 aaKnown RBP13.79□□□□□ -0.2
MSH5-201ENST00000375703 ITGB7P26010 798 aa13.79□□□□□ -0.2
MSH5-201ENST00000375703 NR4A2P43354 598 aa13.79□□□□□ -0.2
MSH5-201ENST00000375703 OR2B6P58173 313 aa13.79□□□□□ -0.2
MSH5-201ENST00000375703 DPTQ07507 201 aa13.79□□□□□ -0.2
MSH5-201ENST00000375703 SF3B4Q15427 424 aaKnown RBP eCLIP13.79□□□□□ -0.24e-9■■■■□ 20.4
MSH5-201ENST00000375703 SYPL1Q16563 259 aa13.79□□□□□ -0.2
MSH5-201ENST00000375703 OCLNQ16625 522 aa13.79□□□□□ -0.2
MSH5-201ENST00000375703 AGAP6Q5VW22 663 aa13.79□□□□□ -0.2
MSH5-201ENST00000375703 DCUN1D3Q8IWE4 304 aa13.79□□□□□ -0.2
MSH5-201ENST00000375703 SLC7A5P1Q8MH63 180 aa13.79□□□□□ -0.2
MSH5-201ENST00000375703 GPR151Q8TDV0 419 aa13.79□□□□□ -0.2
MSH5-201ENST00000375703 AGAP4Q96P64 663 aa13.79□□□□□ -0.2
MSH5-201ENST00000375703 TPK1Q9H3S4 243 aa13.79□□□□□ -0.2
MSH5-201ENST00000375703 MUTYHQ9UIF7 546 aa13.79□□□□□ -0.2
MSH5-201ENST00000375703 SSR3Q9UNL2 185 aa13.79□□□□□ -0.2
MSH5-201ENST00000375703 H3BQ06 376 aaPredicted RBP13.78□□□□□ -0.2
MSH5-201ENST00000375703 H7BY64 318 aa13.78□□□□□ -0.2
MSH5-201ENST00000375703 SLC9A3R1O14745 358 aaPredicted RBP13.78□□□□□ -0.2
MSH5-201ENST00000375703 TPST2O60704 377 aa13.78□□□□□ -0.2
MSH5-201ENST00000375703 NME6O75414 186 aaPredicted RBP13.78□□□□□ -0.2
MSH5-201ENST00000375703 RUNX1T1Q06455 604 aa13.78□□□□□ -0.2
MSH5-201ENST00000375703 C1DQ13901 141 aaKnown RBP13.78□□□□□ -0.2
MSH5-201ENST00000375703 LRRC26Q2I0M4 334 aa13.78□□□□□ -0.2
MSH5-201ENST00000375703 RSBN1Q5VWQ0 802 aaPredicted RBP13.78□□□□□ -0.2
MSH5-201ENST00000375703 PLPP4Q5VZY2 271 aa13.78□□□□□ -0.2
MSH5-201ENST00000375703 PAQR6Q6TCH4 344 aa13.78□□□□□ -0.2
MSH5-201ENST00000375703 TMPRSS11AQ6ZMR5 421 aa13.78□□□□□ -0.2
MSH5-201ENST00000375703 SZRD1Q7Z422 152 aa13.78□□□□□ -0.2
MSH5-201ENST00000375703 PDZD3Q86UT5 571 aa13.78□□□□□ -0.2
MSH5-201ENST00000375703 AMZ2Q86W34 360 aa13.78□□□□□ -0.2
MSH5-201ENST00000375703 C12orf40Q86WS4 652 aa13.78□□□□□ -0.2
MSH5-201ENST00000375703 IQCF1Q8N6M8 205 aa13.78□□□□□ -0.2
MSH5-201ENST00000375703 OR9Q1Q8NGQ5 310 aa13.78□□□□□ -0.2
MSH5-201ENST00000375703 TMCO6Q96DC7 493 aa13.78□□□□□ -0.2
MSH5-201ENST00000375703 TRMT61AQ96FX7 289 aaKnown RBP13.78□□□□□ -0.2
MSH5-201ENST00000375703 SLC6A18Q96N87 628 aa13.78□□□□□ -0.2
MSH5-201ENST00000375703 PRAP1Q96NZ9 151 aa13.78□□□□□ -0.2
MSH5-201ENST00000375703 TREX2Q9BQ50 279 aaPredicted RBP13.78□□□□□ -0.2
MSH5-201ENST00000375703 PELI2Q9HAT8 420 aa13.78□□□□□ -0.2
MSH5-201ENST00000375703 ACAD8Q9UKU7 415 aa13.78□□□□□ -0.2
MSH5-201ENST00000375703 TBC1D24Q9ULP9 559 aa13.78□□□□□ -0.2
MSH5-201ENST00000375703 CCDC88CQ9P219 2028 aa13.78□□□□□ -0.2
MSH5-201ENST00000375703 ZNF670-ZNF695F2Z2N8 137 aa13.78□□□□□ -0.2
MSH5-201ENST00000375703 UGT2B17O75795 530 aa13.78□□□□□ -0.2
MSH5-201ENST00000375703 ADH5P11766 374 aa13.78□□□□□ -0.2
MSH5-201ENST00000375703 ADRB3P13945 408 aa13.78□□□□□ -0.2
MSH5-201ENST00000375703 FRKP42685 505 aaPredicted RBP13.78□□□□□ -0.2
MSH5-201ENST00000375703 LIPKQ5VXJ0 399 aa13.78□□□□□ -0.2
MSH5-201ENST00000375703 PODNL1Q6PEZ8 512 aa13.78□□□□□ -0.2
MSH5-201ENST00000375703 PSD4Q8NDX1 1056 aa13.78□□□□□ -0.2
MSH5-201ENST00000375703 TMIEQ8NEW7 156 aa13.78□□□□□ -0.2
MSH5-201ENST00000375703 WFIKKN2Q8TEU8 576 aa13.78□□□□□ -0.2
MSH5-201ENST00000375703 CAPSLQ8WWF8 208 aa13.78□□□□□ -0.2
MSH5-201ENST00000375703 ASB15Q8WXK1 588 aa13.78□□□□□ -0.2
MSH5-201ENST00000375703 ING5Q8WYH8 240 aa13.78□□□□□ -0.2
MSH5-201ENST00000375703 UCN3Q969E3 161 aa13.78□□□□□ -0.2
MSH5-201ENST00000375703 OR2A14Q96R47 310 aa13.78□□□□□ -0.2
MSH5-201ENST00000375703 NEK6Q9HC98 313 aa13.78□□□□□ -0.2
MSH5-201ENST00000375703 SLC23A2Q9UGH3 650 aa13.78□□□□□ -0.2
MSH5-201ENST00000375703 HCN2Q9UL51 889 aa13.78□□□□□ -0.2
MSH5-201ENST00000375703 A4GNTQ9UNA3 340 aa13.78□□□□□ -0.2
MSH5-201ENST00000375703 KLHL20Q9Y2M5 609 aa13.78□□□□□ -0.2
MSH5-201ENST00000375703 LAMA2P24043 3122 aaKnown RBP13.78□□□□□ -0.2
MSH5-201ENST00000375703 CACNB4O00305 520 aaPredicted RBP13.77□□□□□ -0.2
MSH5-201ENST00000375703 MYL12BO14950 172 aa13.77□□□□□ -0.2
MSH5-201ENST00000375703 TMPRSS11DO60235 418 aa13.77□□□□□ -0.2
MSH5-201ENST00000375703 TP53P04637 393 aaPredicted RBP13.77□□□□□ -0.2
MSH5-201ENST00000375703 CYP17A1P05093 508 aa13.77□□□□□ -0.2
MSH5-201ENST00000375703 KRT8P05787 483 aa13.77□□□□□ -0.2
MSH5-201ENST00000375703 NR2F1P10589 423 aa13.77□□□□□ -0.2
MSH5-201ENST00000375703 ITGB8P26012 769 aa13.77□□□□□ -0.2
MSH5-201ENST00000375703 RCVRNP35243 200 aa13.77□□□□□ -0.2
MSH5-201ENST00000375703 CCR8P51685 355 aa13.77□□□□□ -0.2
MSH5-201ENST00000375703 FNDC3BQ53EP0 1204 aaKnown RBP13.77□□□□□ -0.2
MSH5-201ENST00000375703 TCEAL5Q5H9L2 206 aa13.77□□□□□ -0.2
MSH5-201ENST00000375703 ZNF362Q5T0B9 420 aaPredicted RBP13.77□□□□□ -0.2
MSH5-201ENST00000375703 C9orf64Q5T6V5 341 aa13.77□□□□□ -0.2
MSH5-201ENST00000375703 RNLSQ5VYX0 342 aa13.77□□□□□ -0.2
MSH5-201ENST00000375703 NRARPQ7Z6K4 114 aa13.77□□□□□ -0.2
MSH5-201ENST00000375703 FAM26EQ8N5C1 309 aa13.77□□□□□ -0.2
MSH5-201ENST00000375703 OR8D1Q8WZ84 308 aa13.77□□□□□ -0.2
MSH5-201ENST00000375703 RGMAQ96B86 450 aa13.77□□□□□ -0.2
MSH5-201ENST00000375703 ZNF486Q96H40 463 aaPredicted RBP13.77□□□□□ -0.2
MSH5-201ENST00000375703 FUZQ9BT04 418 aa13.77□□□□□ -0.2
MSH5-201ENST00000375703 FNDC11Q9BVV2 318 aa13.77□□□□□ -0.2
MSH5-201ENST00000375703 OR51I1Q9H343 314 aa13.77□□□□□ -0.2
MSH5-201ENST00000375703 LHX9Q9NQ69 397 aa13.77□□□□□ -0.2
MSH5-201ENST00000375703 NDUFB11Q9NX14 153 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms