RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 ZBTB26Q9HCK0 441 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 SH2D2AQ9NP31 389 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 PNPLA3Q9NST1 481 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 TUBA8Q9NY65 449 aaPredicted RBP13.13□□□□□ -0.31
NELFE-201ENST00000375425 LIPGQ9Y5X9 500 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 ATP6AP2A0A1C7CYW4 349 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 OR14I1A6ND48 311 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 POC1B-GALNT4F8VUJ3 575 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 ATP6AP2O75787 350 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 AIFM1O95831 613 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 CELA3AP09093 270 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 COL6A2P12110 1019 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 ELAVL4P26378 380 aaKnown RBP13.13□□□□□ -0.31
NELFE-201ENST00000375425 SERPINB9P50453 376 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 SLC37A1P57057 533 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 SLC10A1Q14973 349 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 HYAL4Q2M3T9 481 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 SPRED3Q2MJR0 410 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 FRG2Q64ET8 278 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 TTC19Q6DKK2 380 aaPredicted RBP13.13□□□□□ -0.31
NELFE-201ENST00000375425 RNF111Q6ZNA4 994 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 TRILQ7L0X0 811 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 NUDT13Q86X67 352 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 LILRB4Q8NHJ6 448 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 UHMK1Q8TAS1 419 aaKnown RBP13.13□□□□□ -0.31
NELFE-201ENST00000375425 PAQR8Q8TEZ7 354 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 ASB5Q8WWX0 329 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 SPACA9Q96E40 222 aaPredicted RBP13.13□□□□□ -0.31
NELFE-201ENST00000375425 LURAP1Q96LR2 239 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 FRG2BQ96QU4 278 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 GAL3ST4Q96RP7 486 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 FMO2Q99518 471 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 WWTR1Q9GZV5 400 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 ENKD1Q9H0I2 346 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 XPR1Q9UBH6 696 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 TNFRSF10DQ9UBN6 386 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 PCTPQ9UKL6 214 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 RNF6Q9Y252 685 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.13□□□□□ -0.31
NELFE-201ENST00000375425 ZNF407Q9C0G0 2248 aa13.12□□□□□ -0.31
NELFE-201ENST00000375425 A0A1B0GVC2 190 aa13.12□□□□□ -0.31
NELFE-201ENST00000375425 A0A1W2PS29 197 aa13.12□□□□□ -0.31
NELFE-201ENST00000375425 STX16-NPEPL1H3BU86 382 aa13.12□□□□□ -0.31
NELFE-201ENST00000375425 STX16O14662 325 aa13.12□□□□□ -0.31
NELFE-201ENST00000375425 BCKDKO14874 412 aa13.12□□□□□ -0.31
NELFE-201ENST00000375425 SMIM24O75264 130 aa13.12□□□□□ -0.31
NELFE-201ENST00000375425 KRT38O76015 456 aa13.12□□□□□ -0.31
NELFE-201ENST00000375425 CLPSP04118 112 aa13.12□□□□□ -0.31
NELFE-201ENST00000375425 KLK1P06870 262 aa13.12□□□□□ -0.31
NELFE-201ENST00000375425 SLC35E2P0CK97 266 aa13.12□□□□□ -0.31
NELFE-201ENST00000375425 SERPINB3P29508 390 aa13.12□□□□□ -0.31
NELFE-201ENST00000375425 ECHS1P30084 290 aa13.12□□□□□ -0.31
NELFE-201ENST00000375425 CHRNB4P30926 498 aa13.12□□□□□ -0.31
NELFE-201ENST00000375425 GALNSP34059 522 aa13.12□□□□□ -0.31
NELFE-201ENST00000375425 TSNAXIP1Q2TAA8 658 aa13.12□□□□□ -0.31
NELFE-201ENST00000375425 PRAMEF20Q5VT98 475 aa13.12□□□□□ -0.31
NELFE-201ENST00000375425 ZNF585AQ6P3V2 769 aa13.12□□□□□ -0.31
NELFE-201ENST00000375425 ADGRD1Q6QNK2 874 aa13.12□□□□□ -0.31
NELFE-201ENST00000375425 RPS27LQ71UM5 84 aaKnown RBP13.12□□□□□ -0.31
NELFE-201ENST00000375425 MILR1Q7Z6M3 343 aa13.12□□□□□ -0.31
NELFE-201ENST00000375425 CCDC71Q8IV32 467 aaPredicted RBP13.12□□□□□ -0.31
NELFE-201ENST00000375425 OR5M3Q8NGP4 307 aa13.12□□□□□ -0.31
NELFE-201ENST00000375425 DCAKDQ8WVC6 231 aa13.12□□□□□ -0.31
NELFE-201ENST00000375425 SMC6Q96SB8 1091 aa13.12□□□□□ -0.31
NELFE-201ENST00000375425 MRPL57Q9BQC6 102 aaKnown RBP13.12□□□□□ -0.31
NELFE-201ENST00000375425 UCK2Q9BZX2 261 aa13.12□□□□□ -0.31
NELFE-201ENST00000375425 LDAHQ9H6V9 325 aa13.12□□□□□ -0.31
NELFE-201ENST00000375425 TEX10Q9NXF1 929 aaPredicted RBP13.12□□□□□ -0.31
NELFE-201ENST00000375425 AHSPQ9NZD4 102 aa13.12□□□□□ -0.31
NELFE-201ENST00000375425 TMCO1Q9UM00 188 aa13.12□□□□□ -0.31
NELFE-201ENST00000375425 OR6C76A6NM76 312 aa13.11□□□□□ -0.31
NELFE-201ENST00000375425 TRIM49D1C9J1S8 452 aa13.11□□□□□ -0.31
NELFE-201ENST00000375425 PPP6CO00743 305 aa13.11□□□□□ -0.31
NELFE-201ENST00000375425 SUSD5O60279 629 aa13.11□□□□□ -0.31
NELFE-201ENST00000375425 SEMA3DO95025 777 aa13.11□□□□□ -0.31
NELFE-201ENST00000375425 FBXO45P0C2W1 286 aa13.11□□□□□ -0.31
NELFE-201ENST00000375425 RFPL3SP0C7P2 107 aa13.11□□□□□ -0.31
NELFE-201ENST00000375425 CNTFP26441 200 aa13.11□□□□□ -0.31
NELFE-201ENST00000375425 ACVR2AP27037 513 aa13.11□□□□□ -0.31
NELFE-201ENST00000375425 PIK3R1P27986 724 aa13.11□□□□□ -0.31
NELFE-201ENST00000375425 SSTR2P30874 369 aa13.11□□□□□ -0.31
NELFE-201ENST00000375425 SSTR4P31391 388 aa13.11□□□□□ -0.31
NELFE-201ENST00000375425 NUP107P57740 925 aa13.11□□□□□ -0.31
NELFE-201ENST00000375425 KCNJ2P63252 427 aa13.11□□□□□ -0.31
NELFE-201ENST00000375425 TBL3Q12788 808 aaKnown RBP13.11□□□□□ -0.31
NELFE-201ENST00000375425 IFT88Q13099 833 aa13.11□□□□□ -0.31
NELFE-201ENST00000375425 TRAF3Q13114 568 aa13.11□□□□□ -0.31
NELFE-201ENST00000375425 EBPQ15125 230 aaKnown RBP13.11□□□□□ -0.31
NELFE-201ENST00000375425 GLE1Q53GS7 698 aaKnown RBP13.11□□□□□ -0.31
NELFE-201ENST00000375425 SGO1Q5FBB7 561 aa13.11□□□□□ -0.31
NELFE-201ENST00000375425 OR52E8Q6IFG1 317 aa13.11□□□□□ -0.31
NELFE-201ENST00000375425 MEX3BQ6ZN04 569 aaKnown RBP13.11□□□□□ -0.31
NELFE-201ENST00000375425 ACAD11Q709F0 780 aa13.11□□□□□ -0.31
NELFE-201ENST00000375425 TAOK1Q7L7X3 1001 aa13.11□□□□□ -0.31
NELFE-201ENST00000375425 DND1Q8IYX4 353 aaKnown RBP13.11□□□□□ -0.31
NELFE-201ENST00000375425 ACBD4Q8NC06 268 aa13.11□□□□□ -0.31
NELFE-201ENST00000375425 FAM13CQ8NE31 585 aa13.11□□□□□ -0.31
NELFE-201ENST00000375425 MNS1Q8NEH6 495 aa13.11□□□□□ -0.31
NELFE-201ENST00000375425 OR4F6Q8NGB9 312 aa13.11□□□□□ -0.31
NELFE-201ENST00000375425 OR10G3Q8NGC4 313 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms