RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 GFOD2Q3B7J2 385 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 MARCH8Q5T0T0 291 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 CNKSR3Q6P9H4 555 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 ZNF527Q8NB42 609 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 NUP43Q8NFH3 380 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 SETD7Q8WTS6 366 aaKnown RBP11.03□□□□□ -0.64
PTCH1-203ENST00000375274 ZBED3Q96IU2 234 aaPredicted RBP11.03□□□□□ -0.64
PTCH1-203ENST00000375274 ACPTQ9BZG2 426 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 NMNAT1Q9HAN9 279 aaPredicted RBP11.03□□□□□ -0.64
PTCH1-203ENST00000375274 FOLH1BQ9HBA9 442 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 FBXL12Q9NXK8 326 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 PCDHGA3Q9Y5H0 932 aa11.03□□□□□ -0.64
PTCH1-203ENST00000375274 CACNA1SQ13698 1873 aa11.02□□□□□ -0.64
PTCH1-203ENST00000375274 PLD2O14939 933 aa11.02□□□□□ -0.64
PTCH1-203ENST00000375274 AP1G1O43747 822 aa11.02□□□□□ -0.64
PTCH1-203ENST00000375274 C21orf33P30042 268 aaPredicted RBP11.02□□□□□ -0.64
PTCH1-203ENST00000375274 ADRA1AP35348 466 aa11.02□□□□□ -0.64
PTCH1-203ENST00000375274 GGT2P36268 569 aa11.02□□□□□ -0.64
PTCH1-203ENST00000375274 POLR2IP36954 125 aaKnown RBP11.02□□□□□ -0.64
PTCH1-203ENST00000375274 SOX2P48431 317 aa11.02□□□□□ -0.64
PTCH1-203ENST00000375274 RAB2AP61019 212 aa11.02□□□□□ -0.64
PTCH1-203ENST00000375274 ODF4Q2M2E3 257 aa11.02□□□□□ -0.64
PTCH1-203ENST00000375274 SPRED1Q7Z699 444 aa11.02□□□□□ -0.64
PTCH1-203ENST00000375274 ECHDC3Q96DC8 303 aa11.02□□□□□ -0.64
PTCH1-203ENST00000375274 CACNG6Q9BXT2 260 aa11.02□□□□□ -0.64
PTCH1-203ENST00000375274 SPHK2Q9NRA0 654 aa11.02□□□□□ -0.64
PTCH1-203ENST00000375274 ELOVL2Q9NXB9 296 aa11.02□□□□□ -0.64
PTCH1-203ENST00000375274 A0A1B0GVT2 93 aa11.02□□□□□ -0.65
PTCH1-203ENST00000375274 A0A1W2PPK0 400 aa11.02□□□□□ -0.65
PTCH1-203ENST00000375274 H3BSH0 61 aa11.02□□□□□ -0.65
PTCH1-203ENST00000375274 GPR39O43194 453 aa11.02□□□□□ -0.65
PTCH1-203ENST00000375274 MTRF1O75570 445 aaKnown RBP11.02□□□□□ -0.65
PTCH1-203ENST00000375274 CNMDO75829 334 aa11.02□□□□□ -0.65
PTCH1-203ENST00000375274 RLN2P04090 185 aa11.02□□□□□ -0.65
PTCH1-203ENST00000375274 NDUFV2P19404 249 aa11.02□□□□□ -0.65
PTCH1-203ENST00000375274 SHMT2P34897 504 aa11.02□□□□□ -0.65
PTCH1-203ENST00000375274 NTRK2Q16620 822 aa11.02□□□□□ -0.65
PTCH1-203ENST00000375274 KLHL26Q53HC5 615 aa11.02□□□□□ -0.65
PTCH1-203ENST00000375274 ZNF691Q5VV52 312 aa11.02□□□□□ -0.65
PTCH1-203ENST00000375274 UBE2Q1Q7Z7E8 422 aa11.02□□□□□ -0.65
PTCH1-203ENST00000375274 OR2L3Q8NG85 312 aa11.02□□□□□ -0.65
PTCH1-203ENST00000375274 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.02□□□□□ -0.656e-8■■■■■ 75.4
PTCH1-203ENST00000375274 C16orf78Q8WTQ4 265 aa11.02□□□□□ -0.65
PTCH1-203ENST00000375274 STOX2Q9P2F5 926 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-203ENST00000375274 NUP50Q9UKX7 468 aa11.02□□□□□ -0.65
PTCH1-203ENST00000375274 NOP16Q9Y3C1 178 aaKnown RBP11.02□□□□□ -0.65
PTCH1-203ENST00000375274 DOT1LQ8TEK3 1739 aa11.02□□□□□ -0.65
PTCH1-203ENST00000375274 A0A1W2PQ45 241 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-203ENST00000375274 A0A1W2PQY0 241 aa11.02□□□□□ -0.65
PTCH1-203ENST00000375274 METTL21EPA6NDL7 271 aa11.02□□□□□ -0.65
PTCH1-203ENST00000375274 EMC8O43402 210 aa11.02□□□□□ -0.65
PTCH1-203ENST00000375274 NUAK1O60285 661 aa11.02□□□□□ -0.65
PTCH1-203ENST00000375274 PCDHGA12O60330 932 aa11.02□□□□□ -0.65
PTCH1-203ENST00000375274 PAK4O96013 591 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-203ENST00000375274 PCSK6P29122 969 aa11.02□□□□□ -0.65
PTCH1-203ENST00000375274 SLAMF1Q13291 335 aa11.02□□□□□ -0.65
PTCH1-203ENST00000375274 CAMK1Q14012 370 aa11.02□□□□□ -0.65
PTCH1-203ENST00000375274 MANEALQ5VSG8 457 aa11.02□□□□□ -0.65
PTCH1-203ENST00000375274 PLAG1Q6DJT9 500 aa11.02□□□□□ -0.65
PTCH1-203ENST00000375274 GRHL2Q6ISB3 625 aa11.02□□□□□ -0.65
PTCH1-203ENST00000375274 UNC5DQ6UXZ4 953 aa11.02□□□□□ -0.65
PTCH1-203ENST00000375274 CBARPQ8N350 705 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-203ENST00000375274 SLC44A3Q8N4M1 653 aa11.02□□□□□ -0.65
PTCH1-203ENST00000375274 OR6Q1Q8NGQ2 317 aa11.02□□□□□ -0.65
PTCH1-203ENST00000375274 RHOXF1Q8NHV9 184 aa11.02□□□□□ -0.65
PTCH1-203ENST00000375274 OTUB2Q96DC9 234 aa11.02□□□□□ -0.65
PTCH1-203ENST00000375274 DGAT2Q96PD7 388 aa11.02□□□□□ -0.65
PTCH1-203ENST00000375274 C11orf84Q9BUA3 381 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-203ENST00000375274 CERS4Q9HA82 394 aa11.02□□□□□ -0.65
PTCH1-203ENST00000375274 RDH14Q9HBH5 336 aa11.02□□□□□ -0.65
PTCH1-203ENST00000375274 ACOT13Q9NPJ3 140 aa11.02□□□□□ -0.65
PTCH1-203ENST00000375274 CD93Q9NPY3 652 aa11.02□□□□□ -0.65
PTCH1-203ENST00000375274 USP22Q9UPT9 525 aa11.02□□□□□ -0.65
PTCH1-203ENST00000375274 PCDHA9Q9Y5H5 950 aa11.02□□□□□ -0.65
PTCH1-203ENST00000375274 A0A0G2JPF8 293 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 DRGXA6NNA5 263 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 HNRNPCL3B7ZW38 293 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 TLX3O43711 291 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-203ENST00000375274 GPR37L1O60883 481 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 PRH1P02810 166 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 HNRNPCL4P0DMR1 293 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 ATP5A1P25705 553 aaKnown RBP11.01□□□□□ -0.65
PTCH1-203ENST00000375274 ACVR1BP36896 505 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 NR4A2P43354 598 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 MASP1P48740 699 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 BLKP51451 505 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 SELPLGQ14242 412 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 TRAM1Q15629 374 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 UGT3A2Q3SY77 523 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 HSD17B12Q53GQ0 312 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 EIF5AL1Q6IS14 154 aaKnown RBP11.01□□□□□ -0.65
PTCH1-203ENST00000375274 GRASPQ7Z6J2 395 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-203ENST00000375274 ZNF227Q86WZ6 799 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 THAP6Q8TBB0 222 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 ISL2Q96A47 359 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 SLC28A3Q9HAS3 691 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 BTNL2Q9UIR0 455 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 MYADML2A6NDP7 307 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 SLC22A31A6NKX4 558 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 UGDHO60701 494 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms