RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 CMPK1P30085 196 aa11.59□□□□□ -0.55
UBR4-203ENST00000375225 PKLRP30613 574 aa11.59□□□□□ -0.55
UBR4-203ENST00000375225 TRIM23P36406 574 aa11.59□□□□□ -0.55
UBR4-203ENST00000375225 IFNGR2P38484 337 aa11.59□□□□□ -0.55
UBR4-203ENST00000375225 KCNJ5P48544 419 aa11.59□□□□□ -0.55
UBR4-203ENST00000375225 STXBP1P61764 594 aaKnown RBP11.59□□□□□ -0.55
UBR4-203ENST00000375225 SNRPGP62308 76 aaKnown RBP11.59□□□□□ -0.55
UBR4-203ENST00000375225 CSNK1G2P78368 415 aa11.59□□□□□ -0.55
UBR4-203ENST00000375225 MRPS21P82921 87 aaKnown RBP11.59□□□□□ -0.55
UBR4-203ENST00000375225 ALDH6A1Q02252 535 aaKnown RBP11.59□□□□□ -0.55
UBR4-203ENST00000375225 ILKQ13418 452 aa11.59□□□□□ -0.55
UBR4-203ENST00000375225 TP53BP2Q13625 1128 aa11.59□□□□□ -0.55
UBR4-203ENST00000375225 ATP1A4Q13733 1029 aa11.59□□□□□ -0.55
UBR4-203ENST00000375225 PTGES3Q15185 160 aaKnown RBP11.59□□□□□ -0.55
UBR4-203ENST00000375225 IRF4Q15306 451 aa11.59□□□□□ -0.55
UBR4-203ENST00000375225 ZNF404Q494X3 552 aa11.59□□□□□ -0.55
UBR4-203ENST00000375225 ANKDD1AQ495B1 522 aa11.59□□□□□ -0.55
UBR4-203ENST00000375225 C2orf27AQ580R0 203 aa11.59□□□□□ -0.55
UBR4-203ENST00000375225 AGBL4Q5VU57 503 aa11.59□□□□□ -0.55
UBR4-203ENST00000375225 LAIR1Q6GTX8 287 aa11.59□□□□□ -0.55
UBR4-203ENST00000375225 FRMPD2BQ6IN97 320 aa11.59□□□□□ -0.55
UBR4-203ENST00000375225 PTCRAQ6ISU1 281 aaPredicted RBP11.59□□□□□ -0.55
UBR4-203ENST00000375225 SLC46A3Q7Z3Q1 461 aa11.59□□□□□ -0.55
UBR4-203ENST00000375225 ANKRD53Q8N9V6 530 aa11.59□□□□□ -0.55
UBR4-203ENST00000375225 OR9Q2Q8NGE9 314 aa11.59□□□□□ -0.55
UBR4-203ENST00000375225 OR56A1Q8NGH5 318 aa11.59□□□□□ -0.55
UBR4-203ENST00000375225 OR9Q1Q8NGQ5 310 aa11.59□□□□□ -0.55
UBR4-203ENST00000375225 GTPBP3Q969Y2 492 aaKnown RBP11.59□□□□□ -0.55
UBR4-203ENST00000375225 DHRS1Q96LJ7 313 aa11.59□□□□□ -0.55
UBR4-203ENST00000375225 CAMK1GQ96NX5 476 aa11.59□□□□□ -0.55
UBR4-203ENST00000375225 CDCA4Q9BXL8 241 aa11.59□□□□□ -0.55
UBR4-203ENST00000375225 ZNF717Q9BY31 904 aaPredicted RBP11.59□□□□□ -0.55
UBR4-203ENST00000375225 PRRG3Q9BZD7 231 aa11.59□□□□□ -0.55
UBR4-203ENST00000375225 SLC35C2Q9NQQ7 365 aa11.59□□□□□ -0.55
UBR4-203ENST00000375225 CUEDC1Q9NWM3 386 aaPredicted RBP11.59□□□□□ -0.55
UBR4-203ENST00000375225 LYARQ9NX58 379 aaKnown RBP11.59□□□□□ -0.55
UBR4-203ENST00000375225 MS4A12Q9NXJ0 267 aa11.59□□□□□ -0.55
UBR4-203ENST00000375225 ZNF226Q9NYT6 803 aa11.59□□□□□ -0.55
UBR4-203ENST00000375225 OSGIN1Q9UJX0 560 aa11.59□□□□□ -0.55
UBR4-203ENST00000375225 SLC13A4Q9UKG4 626 aa11.59□□□□□ -0.55
UBR4-203ENST00000375225 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.59□□□□□ -0.55
UBR4-203ENST00000375225 RPL36Q9Y3U8 105 aaKnown RBP11.59□□□□□ -0.55
UBR4-203ENST00000375225 REV3LO60673 3130 aa11.59□□□□□ -0.55
UBR4-203ENST00000375225 A0A0A6YYD5 115 aa11.58□□□□□ -0.56
UBR4-203ENST00000375225 A0A1W2PPV9 198 aa11.58□□□□□ -0.56
UBR4-203ENST00000375225 TLR4O00206 839 aa11.58□□□□□ -0.56
UBR4-203ENST00000375225 PCDH17O14917 1159 aa11.58□□□□□ -0.56
UBR4-203ENST00000375225 CASC3O15234 703 aaKnown RBP11.58□□□□□ -0.56
UBR4-203ENST00000375225 OR10H3O60404 316 aa11.58□□□□□ -0.56
UBR4-203ENST00000375225 SLITRK5O94991 958 aa11.58□□□□□ -0.56
UBR4-203ENST00000375225 KLF8O95600 359 aaPredicted RBP11.58□□□□□ -0.56
UBR4-203ENST00000375225 SERPIND1P05546 499 aa11.58□□□□□ -0.56
UBR4-203ENST00000375225 ASGR2P07307 311 aa11.58□□□□□ -0.56
UBR4-203ENST00000375225 SRFP11831 508 aa11.58□□□□□ -0.56
UBR4-203ENST00000375225 ACP5P13686 325 aa11.58□□□□□ -0.56
UBR4-203ENST00000375225 HOXB2P14652 356 aa11.58□□□□□ -0.56
UBR4-203ENST00000375225 GABRB1P18505 474 aa11.58□□□□□ -0.56
UBR4-203ENST00000375225 GSTM3P21266 225 aa11.58□□□□□ -0.56
UBR4-203ENST00000375225 DRD3P35462 400 aa11.58□□□□□ -0.56
UBR4-203ENST00000375225 TGFBR2P37173 567 aa11.58□□□□□ -0.56
UBR4-203ENST00000375225 GSSP48637 474 aa11.58□□□□□ -0.56
UBR4-203ENST00000375225 LSM3P62310 102 aaKnown RBP11.58□□□□□ -0.56
UBR4-203ENST00000375225 PRR5P85299 388 aa11.58□□□□□ -0.56
UBR4-203ENST00000375225 ST3GAL4Q11206 333 aa11.58□□□□□ -0.56
UBR4-203ENST00000375225 TDGQ13569 410 aa11.58□□□□□ -0.56
UBR4-203ENST00000375225 GANABQ14697 944 aaKnown RBP11.58□□□□□ -0.56
UBR4-203ENST00000375225 Q7L0L9 218 aa11.58□□□□□ -0.56
UBR4-203ENST00000375225 SAMD14Q8IZD0 417 aaPredicted RBP11.58□□□□□ -0.56
UBR4-203ENST00000375225 ADGRF3Q8IZF5 1079 aa11.58□□□□□ -0.56
UBR4-203ENST00000375225 IL17RCQ8NAC3 791 aa11.58□□□□□ -0.56
UBR4-203ENST00000375225 SUN3Q8TAQ9 357 aa11.58□□□□□ -0.56
UBR4-203ENST00000375225 GANCQ8TET4 914 aa11.58□□□□□ -0.56
UBR4-203ENST00000375225 SORBS1Q9BX66 1292 aaKnown RBP11.58□□□□□ -0.56
UBR4-203ENST00000375225 TEX12Q9BXU0 123 aa11.58□□□□□ -0.56
UBR4-203ENST00000375225 MROQ9BYG7 248 aa11.58□□□□□ -0.56
UBR4-203ENST00000375225 ROGDIQ9GZN7 287 aa11.58□□□□□ -0.56
UBR4-203ENST00000375225 C3orf14Q9HBI5 128 aa11.58□□□□□ -0.56
UBR4-203ENST00000375225 BCL2L10Q9HD36 194 aa11.58□□□□□ -0.56
UBR4-203ENST00000375225 SLC2A4RGQ9NR83 387 aa11.58□□□□□ -0.56
UBR4-203ENST00000375225 ZCCHC3Q9NUD5 404 aaKnown RBP11.58□□□□□ -0.56
UBR4-203ENST00000375225 IMP3Q9NV31 184 aaKnown RBP11.58□□□□□ -0.56
UBR4-203ENST00000375225 TRPC4Q9UBN4 977 aa11.58□□□□□ -0.56
UBR4-203ENST00000375225 FTSJ1Q9UET6 329 aa11.58□□□□□ -0.56
UBR4-203ENST00000375225 SNX7Q9UNH6 387 aa11.58□□□□□ -0.56
UBR4-203ENST00000375225 A0A0G2JPF8 293 aa11.57□□□□□ -0.56
UBR4-203ENST00000375225 FEZF1A0PJY2 475 aa11.57□□□□□ -0.56
UBR4-203ENST00000375225 HNRNPCL2B2RXH8 293 aa11.57□□□□□ -0.56
UBR4-203ENST00000375225 HNRNPCL3B7ZW38 293 aa11.57□□□□□ -0.56
UBR4-203ENST00000375225 J3KTA2 159 aa11.57□□□□□ -0.56
UBR4-203ENST00000375225 RTCAO00442 366 aaKnown RBP11.57□□□□□ -0.56
UBR4-203ENST00000375225 HMGN4O00479 90 aa11.57□□□□□ -0.56
UBR4-203ENST00000375225 MAN2B1O00754 1011 aa11.57□□□□□ -0.56
UBR4-203ENST00000375225 GASTP01350 101 aa11.57□□□□□ -0.56
UBR4-203ENST00000375225 DNTTP04053 509 aa11.57□□□□□ -0.56
UBR4-203ENST00000375225 HNRNPCL4P0DMR1 293 aa11.57□□□□□ -0.56
UBR4-203ENST00000375225 ADORA3P0DMS8 318 aa11.57□□□□□ -0.56
UBR4-203ENST00000375225 CHMP24386 653 aa11.57□□□□□ -0.56
UBR4-203ENST00000375225 BCAP31P51572 246 aa11.57□□□□□ -0.56
UBR4-203ENST00000375225 XKP51811 444 aa11.57□□□□□ -0.56
UBR4-203ENST00000375225 NCBP2P52298 156 aaKnown RBP eCLIP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms