RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 HCAR2Q8TDS4 363 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 FOLH1BQ9HBA9 442 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 FBXL12Q9NXK8 326 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 MGAT4CQ9UBM8 478 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 EDARQ9UNE0 448 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 LRRC37AA6NMS7 1700 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 H3BSH0 61 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 EEDO75530 441 aaKnown RBP11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 POP7O75817 140 aaKnown RBP11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 CTSOP43234 321 aaPredicted RBP11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 FADDQ13158 208 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 TMEM69Q5SWH9 247 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 SSX6Q7RTT6 188 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 SYNPOQ8N3V7 929 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 MINDY1Q8N5J2 469 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 TTC9BQ8N6N2 239 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 TFGQ92734 400 aaPredicted RBP11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 FUNDC2Q9BWH2 189 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 ARL6Q9H0F7 186 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 ABCG5Q9H222 651 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 RGCCQ9H4X1 137 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 PCDHB16Q9NRJ7 776 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 HSPE1-MOB4S4R3N1 261 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 PCDH17O14917 1159 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 ADH1BP00325 375 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 ALDOAP04075 364 aaKnown RBP11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 AGTR2P50052 363 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 MECP2P51608 486 aaKnown RBP11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 ACTC1P68032 377 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 ACTA1P68133 377 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 CCDC58Q4VC31 144 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 SPATC1Q76KD6 591 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 TMEM135Q86UB9 458 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 OR8J1Q8NGP2 316 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 MFSD8Q8NHS3 518 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 SMARCD2Q92925 531 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 MOAP1Q96BY2 351 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 PFDN5Q99471 154 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 POTEKPQ9BYX7 375 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 SLC5A7Q9GZV3 580 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 NANSQ9NR45 359 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 FAM118AQ9NWS6 357 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 HTR2BP41595 481 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 LEPRP48357 1165 aaKnown RBP11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 EIF4HQ15056 248 aaKnown RBP11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 EXOC3L2Q2M3D2 409 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 ZNF805Q5CZA5 627 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 TECRLQ5HYJ1 363 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 VTCN1Q7Z7D3 282 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 ZNF584Q8IVC4 421 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 PLA2G15Q8NCC3 412 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 OR4K1Q8NGD4 311 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 C7orf34Q96L11 122 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 DPCDQ9BVM2 203 aaPredicted RBP11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 GPR89AB7ZAQ6 455 aa11.75□□□□□ -0.53
NPLOC4-202ENST00000374747 EIF1AYO14602 144 aaKnown RBP11.75□□□□□ -0.53
NPLOC4-202ENST00000374747 TOXO94900 526 aa11.75□□□□□ -0.53
NPLOC4-202ENST00000374747 AHSA1O95433 338 aa11.75□□□□□ -0.53
NPLOC4-202ENST00000374747 PTTG1O95997 202 aa11.75□□□□□ -0.53
NPLOC4-202ENST00000374747 GPR89BP0CG08 455 aa11.75□□□□□ -0.53
NPLOC4-202ENST00000374747 EIF1AXP47813 144 aaKnown RBP11.75□□□□□ -0.53
NPLOC4-202ENST00000374747 PPP5CP53041 499 aa11.75□□□□□ -0.53
NPLOC4-202ENST00000374747 MLLT10P55197 1068 aa11.75□□□□□ -0.53
NPLOC4-202ENST00000374747 SPHARQ15513 63 aa11.75□□□□□ -0.53
NPLOC4-202ENST00000374747 COL28A1Q2UY09 1125 aa11.75□□□□□ -0.53
NPLOC4-202ENST00000374747 RAB41Q5JT25 222 aa11.75□□□□□ -0.53
NPLOC4-202ENST00000374747 GTF2IRD2BQ6EKJ0 949 aa11.75□□□□□ -0.53
NPLOC4-202ENST00000374747 C22orf42Q6IC83 251 aa11.75□□□□□ -0.53
NPLOC4-202ENST00000374747 NOXRED1Q6NXP6 359 aa11.75□□□□□ -0.53
NPLOC4-202ENST00000374747 GTF2IRD2Q86UP8 949 aa11.75□□□□□ -0.53
NPLOC4-202ENST00000374747 OR2T33Q8NG76 320 aa11.75□□□□□ -0.53
NPLOC4-202ENST00000374747 HMGB4Q8WW32 186 aa11.75□□□□□ -0.53
NPLOC4-202ENST00000374747 UTP4Q969X6 686 aaKnown RBP11.75□□□□□ -0.53
NPLOC4-202ENST00000374747 SHDQ96IW2 340 aa11.75□□□□□ -0.53
NPLOC4-202ENST00000374747 DPYSL5Q9BPU6 564 aa11.75□□□□□ -0.53
NPLOC4-202ENST00000374747 SYT4Q9H2B2 425 aa11.75□□□□□ -0.53
NPLOC4-202ENST00000374747 FAIMQ9NVQ4 179 aa11.75□□□□□ -0.53
NPLOC4-202ENST00000374747 SMOXQ9NWM0 555 aa11.75□□□□□ -0.53
NPLOC4-202ENST00000374747 STUB1Q9UNE7 303 aa11.75□□□□□ -0.53
NPLOC4-202ENST00000374747 MMP20O60882 483 aa11.75□□□□□ -0.53
NPLOC4-202ENST00000374747 HOXB2P14652 356 aa11.75□□□□□ -0.53
NPLOC4-202ENST00000374747 TUBG1P23258 451 aa11.75□□□□□ -0.53
NPLOC4-202ENST00000374747 MLLT1Q03111 559 aaPredicted RBP11.75□□□□□ -0.53
NPLOC4-202ENST00000374747 NFATC3Q12968 1075 aa11.75□□□□□ -0.53
NPLOC4-202ENST00000374747 NPRL3Q12980 569 aa11.75□□□□□ -0.53
NPLOC4-202ENST00000374747 GRM2Q14416 872 aa11.75□□□□□ -0.53
NPLOC4-202ENST00000374747 GPRC6AQ5T6X5 926 aa11.75□□□□□ -0.53
NPLOC4-202ENST00000374747 OR5T2Q8NGG2 359 aa11.75□□□□□ -0.53
NPLOC4-202ENST00000374747 RAB8BQ92930 207 aa11.75□□□□□ -0.53
NPLOC4-202ENST00000374747 TESCQ96BS2 214 aa11.75□□□□□ -0.53
NPLOC4-202ENST00000374747 ORAI3Q9BRQ5 295 aa11.75□□□□□ -0.53
NPLOC4-202ENST00000374747 MCCC2Q9HCC0 563 aa11.75□□□□□ -0.53
NPLOC4-202ENST00000374747 ALKBH4Q9NXW9 302 aa11.75□□□□□ -0.53
NPLOC4-202ENST00000374747 RABL2AQ9UBK7 228 aaPredicted RBP11.75□□□□□ -0.53
NPLOC4-202ENST00000374747 RABL2BQ9UNT1 228 aa11.75□□□□□ -0.53
NPLOC4-202ENST00000374747 FOXD2O60548 495 aaPredicted RBP11.75□□□□□ -0.53
NPLOC4-202ENST00000374747 BPNT1O95861 308 aa11.75□□□□□ -0.53
NPLOC4-202ENST00000374747 MRPL3P09001 348 aaKnown RBP11.75□□□□□ -0.53
NPLOC4-202ENST00000374747 C8orf89P0DMQ9 161 aa11.75□□□□□ -0.53
NPLOC4-202ENST00000374747 SOX2P48431 317 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms