RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 RAB8AP61006 207 aa13.61□□□□□ -0.23
LMX1B-202ENST00000373474 ZNF805Q5CZA5 627 aa13.61□□□□□ -0.23
LMX1B-202ENST00000373474 GLT8D1Q68CQ7 371 aa13.61□□□□□ -0.23
LMX1B-202ENST00000373474 ZNF776Q68DI1 518 aaPredicted RBP13.61□□□□□ -0.23
LMX1B-202ENST00000373474 ZNF529Q6P280 563 aa13.61□□□□□ -0.23
LMX1B-202ENST00000373474 VTCN1Q7Z7D3 282 aa13.61□□□□□ -0.23
LMX1B-202ENST00000373474 BEST3Q8N1M1 668 aa13.61□□□□□ -0.23
LMX1B-202ENST00000373474 SAMD12Q8N8I0 201 aa13.61□□□□□ -0.23
LMX1B-202ENST00000373474 A0A0G2JMP0 313 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 SORBS2O94875 1100 aaKnown RBP13.6□□□□□ -0.23
LMX1B-202ENST00000373474 OAZ2O95190 189 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 CKMT1AP12532 417 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 TCEA1P23193 301 aaKnown RBP13.6□□□□□ -0.23
LMX1B-202ENST00000373474 ETV3P41162 512 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 CHAF1BQ13112 559 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 NRROSQ86YC3 692 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 OR4M2Q8NGB6 313 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 FUBP1Q96AE4 644 aaKnown RBP13.6□□□□□ -0.23
LMX1B-202ENST00000373474 MCHR1Q99705 422 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 NENFQ9UMX5 172 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 SMIM30A4D0T7 59 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 TRAPPC13A5PLN9 417 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 TSPAN6O43657 245 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 HOXD8P13378 290 aaPredicted RBP13.6□□□□□ -0.23
LMX1B-202ENST00000373474 GTF2F2P13984 249 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 CRISP1P54107 249 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 NCS1P62166 190 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 LIPKQ5VXJ0 399 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 TERB2Q8NHR7 220 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 ARL11Q969Q4 196 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 SMG9Q9H0W8 520 aaKnown RBP13.6□□□□□ -0.23
LMX1B-202ENST00000373474 QPCTLQ9NXS2 382 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 CDC14AQ9UNH5 594 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 EEF1E1O43324 174 aaKnown RBP13.6□□□□□ -0.23
LMX1B-202ENST00000373474 LEFTY1O75610 366 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 PPP5CP53041 499 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 C3orf33Q6P1S2 294 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 PRSS58Q8IYP2 241 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 SSX3Q99909 188 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 C17orf62Q9BQA9 187 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 SERINC1Q9NRX5 453 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 STUB1Q9UNE7 303 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 PROM1O43490 865 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 ADH1BP00325 375 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 IL32P24001 234 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 CD97P48960 835 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 FXYD6P3P58550 94 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 MLLT1Q03111 559 aaPredicted RBP13.6□□□□□ -0.23
LMX1B-202ENST00000373474 TLDC1Q6P9B6 456 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 SLC29A4Q7RTT9 530 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 ZNF584Q8IVC4 421 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 MAPK15Q8TD08 544 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 BEX2Q9BXY8 128 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 KATNBL1Q9H079 304 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 BEX1Q9HBH7 125 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 TMEM181Q9P2C4 612 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 KCNK6Q9Y257 313 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 WDR45Q9Y484 360 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 LATS1O95835 1130 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 CERS1P27544 350 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 SSX2Q16385 188 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 DECR1Q16698 335 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 ATAD3CQ5T2N8 411 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 ZNF648Q5T619 568 aaPredicted RBP13.6□□□□□ -0.23
LMX1B-202ENST00000373474 SLC27A4Q6P1M0 643 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 THEM6Q8WUY1 208 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 MALSU1Q96EH3 234 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 TMEM68Q96MH6 324 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 GRHPRQ9UBQ7 328 aa13.6□□□□□ -0.23
LMX1B-202ENST00000373474 B4DGG1 531 aa13.59□□□□□ -0.23
LMX1B-202ENST00000373474 KIAA0513O60268 411 aa13.59□□□□□ -0.23
LMX1B-202ENST00000373474 HOXA11P31270 313 aaPredicted RBP13.59□□□□□ -0.23
LMX1B-202ENST00000373474 Q6ZVL8 140 aa13.59□□□□□ -0.23
LMX1B-202ENST00000373474 KDM1BQ8NB78 822 aa13.59□□□□□ -0.23
LMX1B-202ENST00000373474 OR52B6Q8NGF0 335 aa13.59□□□□□ -0.23
LMX1B-202ENST00000373474 GLYATL1Q969I3 302 aa13.59□□□□□ -0.23
LMX1B-202ENST00000373474 CIDECQ96AQ7 238 aaPredicted RBP13.59□□□□□ -0.23
LMX1B-202ENST00000373474 DPH2Q9BQC3 489 aaPredicted RBP13.59□□□□□ -0.23
LMX1B-202ENST00000373474 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.59□□□□□ -0.23
LMX1B-202ENST00000373474 UNC119BA6NIH7 251 aa13.59□□□□□ -0.23
LMX1B-202ENST00000373474 ZNF726A6NNF4 738 aa13.59□□□□□ -0.23
LMX1B-202ENST00000373474 PCDH17O14917 1159 aa13.59□□□□□ -0.23
LMX1B-202ENST00000373474 LRRTM2O43300 516 aa13.59□□□□□ -0.23
LMX1B-202ENST00000373474 PAHP00439 452 aa13.59□□□□□ -0.23
LMX1B-202ENST00000373474 GCAP28676 217 aa13.59□□□□□ -0.23
LMX1B-202ENST00000373474 MS4A2Q01362 244 aa13.59□□□□□ -0.23
LMX1B-202ENST00000373474 MAMDC4Q6UXC1 1216 aa13.59□□□□□ -0.23
LMX1B-202ENST00000373474 C7orf61Q8IZ16 206 aa13.59□□□□□ -0.23
LMX1B-202ENST00000373474 TMEM130Q8N3G9 435 aa13.59□□□□□ -0.23
LMX1B-202ENST00000373474 TP63Q9H3D4 680 aaPredicted RBP13.59□□□□□ -0.23
LMX1B-202ENST00000373474 INSL6Q9Y581 213 aa13.59□□□□□ -0.23
LMX1B-202ENST00000373474 A0A1B0GVT2 93 aa13.59□□□□□ -0.23
LMX1B-202ENST00000373474 SLC35F4A4IF30 521 aa13.59□□□□□ -0.23
LMX1B-202ENST00000373474 F8W036 122 aa13.59□□□□□ -0.23
LMX1B-202ENST00000373474 GALTP07902 379 aa13.59□□□□□ -0.23
LMX1B-202ENST00000373474 ITGA5P08648 1049 aa13.59□□□□□ -0.23
LMX1B-202ENST00000373474 HNRNPFP52597 415 aaKnown RBP13.59□□□□□ -0.23
LMX1B-202ENST00000373474 BLOC1S1P78537 153 aa13.59□□□□□ -0.23
LMX1B-202ENST00000373474 B3GNT9Q6UX72 402 aa13.59□□□□□ -0.23
LMX1B-202ENST00000373474 CEP68Q76N32 757 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms