RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 MEDAGQ5VYS4 303 aa13.02□□□□□ -0.33
USP49-201ENST00000373006 TYW3Q6IPR3 259 aaKnown RBP13.02□□□□□ -0.33
USP49-201ENST00000373006 HMGN2P46Q86SG4 172 aa13.02□□□□□ -0.33
USP49-201ENST00000373006 ARL14EPQ8N8R7 260 aaPredicted RBP13.02□□□□□ -0.33
USP49-201ENST00000373006 TM9SF4Q92544 642 aa13.02□□□□□ -0.33
USP49-201ENST00000373006 UPRTQ96BW1 309 aa13.02□□□□□ -0.33
USP49-201ENST00000373006 MCOLN1Q9GZU1 580 aa13.02□□□□□ -0.33
USP49-201ENST00000373006 ZDHHC6Q9H6R6 413 aa13.02□□□□□ -0.33
USP49-201ENST00000373006 GALNT9Q9HCQ5 603 aa13.02□□□□□ -0.33
USP49-201ENST00000373006 ANGPT4Q9Y264 503 aa13.02□□□□□ -0.33
USP49-201ENST00000373006 A0A1W2PRB8 838 aa13.01□□□□□ -0.33
USP49-201ENST00000373006 HNRNPCL2B2RXH8 293 aa13.01□□□□□ -0.33
USP49-201ENST00000373006 SH3BP5O60239 455 aa13.01□□□□□ -0.33
USP49-201ENST00000373006 UGDHO60701 494 aa13.01□□□□□ -0.33
USP49-201ENST00000373006 KLK1P06870 262 aa13.01□□□□□ -0.33
USP49-201ENST00000373006 HLA-DMAP28067 261 aa13.01□□□□□ -0.33
USP49-201ENST00000373006 CD70P32970 193 aa13.01□□□□□ -0.33
USP49-201ENST00000373006 PCBP3P57721 371 aaKnown RBP13.01□□□□□ -0.33
USP49-201ENST00000373006 C19orf57Q0VDD7 668 aa13.01□□□□□ -0.33
USP49-201ENST00000373006 IL18Q14116 193 aa13.01□□□□□ -0.33
USP49-201ENST00000373006 WSCD2Q2TBF2 565 aa13.01□□□□□ -0.33
USP49-201ENST00000373006 TCTN3Q6NUS6 607 aa13.01□□□□□ -0.33
USP49-201ENST00000373006 CNIH2Q6PI25 160 aa13.01□□□□□ -0.33
USP49-201ENST00000373006 ZNF783Q6ZMS7 281 aa13.01□□□□□ -0.33
USP49-201ENST00000373006 LAPTM4BQ86VI4 370 aa13.01□□□□□ -0.33
USP49-201ENST00000373006 TCTE3Q8IZS6 198 aa13.01□□□□□ -0.33
USP49-201ENST00000373006 DBF4BQ8NFT6 615 aa13.01□□□□□ -0.33
USP49-201ENST00000373006 OR2AP1Q8NGE2 309 aa13.01□□□□□ -0.33
USP49-201ENST00000373006 OR52I1Q8NGK6 324 aa13.01□□□□□ -0.33
USP49-201ENST00000373006 OR8J1Q8NGP2 316 aa13.01□□□□□ -0.33
USP49-201ENST00000373006 ASZ1Q8WWH4 475 aa13.01□□□□□ -0.33
USP49-201ENST00000373006 ST8SIA2Q92186 375 aa13.01□□□□□ -0.33
USP49-201ENST00000373006 LRR1Q96L50 414 aa13.01□□□□□ -0.33
USP49-201ENST00000373006 ANKRA2Q9H9E1 313 aa13.01□□□□□ -0.33
USP49-201ENST00000373006 B3GAT2Q9NPZ5 323 aa13.01□□□□□ -0.33
USP49-201ENST00000373006 CTPS2Q9NRF8 586 aa13.01□□□□□ -0.33
USP49-201ENST00000373006 SH2B3Q9UQQ2 575 aa13.01□□□□□ -0.33
USP49-201ENST00000373006 AP1M2Q9Y6Q5 423 aa13.01□□□□□ -0.33
USP49-201ENST00000373006 IGLV3-16A0A075B6K0 115 aa13.01□□□□□ -0.33
USP49-201ENST00000373006 B8ZZF3 427 aa13.01□□□□□ -0.33
USP49-201ENST00000373006 TEX46H3BTG2 121 aa13.01□□□□□ -0.33
USP49-201ENST00000373006 GPR37L1O60883 481 aa13.01□□□□□ -0.33
USP49-201ENST00000373006 SOCS5O75159 536 aa13.01□□□□□ -0.33
USP49-201ENST00000373006 ADAP00813 363 aa13.01□□□□□ -0.33
USP49-201ENST00000373006 FURINP09958 794 aa13.01□□□□□ -0.33
USP49-201ENST00000373006 PRKAR2AP13861 404 aaKnown RBP13.01□□□□□ -0.33
USP49-201ENST00000373006 ELAVL4P26378 380 aaKnown RBP13.01□□□□□ -0.33
USP49-201ENST00000373006 EVI2BP34910 448 aa13.01□□□□□ -0.33
USP49-201ENST00000373006 CCT3P49368 545 aaKnown RBP13.01□□□□□ -0.33
USP49-201ENST00000373006 PRKCZQ05513 592 aa13.01□□□□□ -0.33
USP49-201ENST00000373006 PIN1Q13526 163 aaPredicted RBP13.01□□□□□ -0.33
USP49-201ENST00000373006 PLEKHS1Q5SXH7 462 aa13.01□□□□□ -0.33
USP49-201ENST00000373006 LAMTOR1Q6IAA8 161 aa13.01□□□□□ -0.33
USP49-201ENST00000373006 KIAA1841Q6NSI8 718 aa13.01□□□□□ -0.33
USP49-201ENST00000373006 CLDN22Q8N7P3 220 aa13.01□□□□□ -0.33
USP49-201ENST00000373006 TMEM245Q9H330 911 aa13.01□□□□□ -0.33
USP49-201ENST00000373006 MVB12BQ9H7P6 319 aa13.01□□□□□ -0.33
USP49-201ENST00000373006 BRF2Q9HAW0 419 aa13.01□□□□□ -0.33
USP49-201ENST00000373006 ATP13A2Q9NQ11 1180 aa13.01□□□□□ -0.33
USP49-201ENST00000373006 KLHL42Q9P2K6 505 aa13.01□□□□□ -0.33
USP49-201ENST00000373006 ANKDD1BA6NHY2 528 aa13□□□□□ -0.33
USP49-201ENST00000373006 PBLDP30039 288 aaPredicted RBP13□□□□□ -0.33
USP49-201ENST00000373006 DSTNP60981 165 aa13□□□□□ -0.33
USP49-201ENST00000373006 SP140Q13342 867 aa13□□□□□ -0.33
USP49-201ENST00000373006 INSL4Q14641 139 aa13□□□□□ -0.33
USP49-201ENST00000373006 USP45Q70EL2 814 aa13□□□□□ -0.33
USP49-201ENST00000373006 GPR32P1Q8NGA4 272 aa13□□□□□ -0.33
USP49-201ENST00000373006 GOT1L1Q8NHS2 421 aaPredicted RBP13□□□□□ -0.33
USP49-201ENST00000373006 RIT1Q92963 219 aa13□□□□□ -0.33
USP49-201ENST00000373006 B4GALT6Q9UBX8 382 aa13□□□□□ -0.33
USP49-201ENST00000373006 SLC23A1Q9UHI7 598 aa13□□□□□ -0.33
USP49-201ENST00000373006 ATP6V1HQ9UI12 483 aa13□□□□□ -0.33
USP49-201ENST00000373006 HCN2Q9UL51 889 aa13□□□□□ -0.33
USP49-201ENST00000373006 C5orf58C9J3I9 102 aa13□□□□□ -0.33
USP49-201ENST00000373006 CASKO14936 926 aa13□□□□□ -0.33
USP49-201ENST00000373006 SLC16A5O15375 505 aa13□□□□□ -0.33
USP49-201ENST00000373006 SGTAO43765 313 aa13□□□□□ -0.33
USP49-201ENST00000373006 PDE9AO76083 593 aa13□□□□□ -0.33
USP49-201ENST00000373006 ARAFP10398 606 aa13□□□□□ -0.33
USP49-201ENST00000373006 DDCP20711 480 aa13□□□□□ -0.33
USP49-201ENST00000373006 IMPA1P29218 277 aa13□□□□□ -0.33
USP49-201ENST00000373006 LMAN2Q12907 356 aa13□□□□□ -0.33
USP49-201ENST00000373006 SNTA1Q13424 505 aa13□□□□□ -0.33
USP49-201ENST00000373006 POU4F3Q15319 338 aa13□□□□□ -0.33
USP49-201ENST00000373006 TXNDC8Q6A555 127 aa13□□□□□ -0.33
USP49-201ENST00000373006 HSDL2Q6YN16 418 aa13□□□□□ -0.33
USP49-201ENST00000373006 LSRQ86X29 649 aaPredicted RBP13□□□□□ -0.33
USP49-201ENST00000373006 OR4D11Q8NGI4 311 aa13□□□□□ -0.33
USP49-201ENST00000373006 SLC7A13Q8TCU3 470 aa13□□□□□ -0.33
USP49-201ENST00000373006 SLC38A5Q8WUX1 472 aa13□□□□□ -0.33
USP49-201ENST00000373006 MAGEB10Q96LZ2 347 aaPredicted RBP13□□□□□ -0.33
USP49-201ENST00000373006 C1QTNF6Q9BXI9 259 aa13□□□□□ -0.33
USP49-201ENST00000373006 SLC6A16Q9GZN6 736 aa13□□□□□ -0.33
USP49-201ENST00000373006 CDCP1Q9H5V8 836 aa13□□□□□ -0.33
USP49-201ENST00000373006 KLHL21Q9UJP4 597 aa13□□□□□ -0.33
USP49-201ENST00000373006 LRFN2Q9ULH4 789 aa13□□□□□ -0.33
USP49-201ENST00000373006 GPR52Q9Y2T5 361 aa13□□□□□ -0.33
USP49-201ENST00000373006 PDHA2P29803 388 aa13□□□□□ -0.33
USP49-201ENST00000373006 CD79BP40259 229 aa13□□□□□ -0.33
USP49-201ENST00000373006 AVPR1BP47901 424 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms