RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 RPS27LQ71UM5 84 aaKnown RBP11.05□□□□□ -0.64
VCL-202ENST00000372755 TMPRSS12Q86WS5 348 aa11.05□□□□□ -0.64
VCL-202ENST00000372755 SYNPOQ8N3V7 929 aa11.05□□□□□ -0.64
VCL-202ENST00000372755 OR8J1Q8NGP2 316 aa11.05□□□□□ -0.64
VCL-202ENST00000372755 TMEM185BQ9H7F4 350 aa11.05□□□□□ -0.64
VCL-202ENST00000372755 ADAM18Q9Y3Q7 739 aa11.05□□□□□ -0.64
VCL-202ENST00000372755 GRXCR2A6NFK2 248 aa11.05□□□□□ -0.64
VCL-202ENST00000372755 A6NLC8 198 aa11.05□□□□□ -0.64
VCL-202ENST00000372755 H2AFB2P0C5Z0 115 aa11.05□□□□□ -0.64
VCL-202ENST00000372755 JUPP14923 745 aa11.05□□□□□ -0.64
VCL-202ENST00000372755 ADH6P28332 368 aa11.05□□□□□ -0.64
VCL-202ENST00000372755 TBRG1Q3YBR2 411 aa11.05□□□□□ -0.64
VCL-202ENST00000372755 LRRC37A5PQ49AS3 106 aa11.05□□□□□ -0.64
VCL-202ENST00000372755 LIPKQ5VXJ0 399 aa11.05□□□□□ -0.64
VCL-202ENST00000372755 BORAQ6PGQ7 559 aa11.05□□□□□ -0.64
VCL-202ENST00000372755 TRIM74Q86UV6 250 aa11.05□□□□□ -0.64
VCL-202ENST00000372755 TXNDC5Q8NBS9 432 aaKnown RBP11.05□□□□□ -0.64
VCL-202ENST00000372755 TOR1AIP2Q8NFQ8 470 aa11.05□□□□□ -0.64
VCL-202ENST00000372755 SMG9Q9H0W8 520 aaKnown RBP11.05□□□□□ -0.64
VCL-202ENST00000372755 SUSD2Q9UGT4 822 aa11.05□□□□□ -0.64
VCL-202ENST00000372755 TIMM8BQ9Y5J9 83 aaPredicted RBP11.05□□□□□ -0.64
VCL-202ENST00000372755 KIDINS220Q9ULH0 1771 aa11.05□□□□□ -0.64
VCL-202ENST00000372755 A0A0D9SEW6 157 aa11.05□□□□□ -0.64
VCL-202ENST00000372755 MEN1O00255 615 aa11.05□□□□□ -0.64
VCL-202ENST00000372755 RNGTTO60942 597 aaKnown RBP11.05□□□□□ -0.64
VCL-202ENST00000372755 RHCEP18577 417 aa11.05□□□□□ -0.64
VCL-202ENST00000372755 AGTR1P30556 359 aa11.05□□□□□ -0.64
VCL-202ENST00000372755 OLIG2Q13516 323 aa11.05□□□□□ -0.64
VCL-202ENST00000372755 CATSPEREQ5SY80 951 aa11.05□□□□□ -0.64
VCL-202ENST00000372755 CENPSQ8N2Z9 138 aa11.05□□□□□ -0.64
VCL-202ENST00000372755 ISOC1Q96CN7 298 aa11.05□□□□□ -0.64
VCL-202ENST00000372755 ZNF317Q96PQ6 595 aaPredicted RBP11.05□□□□□ -0.64
VCL-202ENST00000372755 DNTTIP1Q9H147 329 aa11.05□□□□□ -0.64
VCL-202ENST00000372755 ADAMTS10Q9H324 1103 aa11.05□□□□□ -0.64
VCL-202ENST00000372755 MEAF6Q9HAF1 191 aa11.05□□□□□ -0.64
VCL-202ENST00000372755 HIF3AQ9Y2N7 669 aa11.05□□□□□ -0.64
VCL-202ENST00000372755 GXYLT2A0PJZ3 443 aa11.05□□□□□ -0.64
VCL-202ENST00000372755 COCHO43405 550 aa11.05□□□□□ -0.64
VCL-202ENST00000372755 SSX5O60225 188 aa11.05□□□□□ -0.64
VCL-202ENST00000372755 CSF2P04141 144 aa11.05□□□□□ -0.64
VCL-202ENST00000372755 NAA10P41227 235 aaPredicted RBP11.05□□□□□ -0.64
VCL-202ENST00000372755 MAP2K3P46734 347 aa11.05□□□□□ -0.64
VCL-202ENST00000372755 RING1Q06587 406 aa11.05□□□□□ -0.64
VCL-202ENST00000372755 SLC16A9Q7RTY1 509 aa11.05□□□□□ -0.64
VCL-202ENST00000372755 TBCCD1Q9NVR7 557 aa11.05□□□□□ -0.64
VCL-202ENST00000372755 GIMAP2Q9UG22 337 aa11.05□□□□□ -0.64
VCL-202ENST00000372755 POU2F3Q9UKI9 436 aa11.05□□□□□ -0.64
VCL-202ENST00000372755 HNRNPA1P09651 372 aaKnown RBP eCLIP11.04□□□□□ -0.64
VCL-202ENST00000372755 PTNP21246 168 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 ELK4P28324 431 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 SUOXP51687 545 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 CAV3P56539 151 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 GALK2Q01415 458 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 TMEM236Q5W0B7 351 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 ZC3H14Q6PJT7 736 aaKnown RBP11.04□□□□□ -0.64
VCL-202ENST00000372755 IGSF21Q96ID5 467 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 TMEM59LQ9UK28 342 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 A0A1W2PPW3 197 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 PCDH17O14917 1159 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 BRINP1O60477 761 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 EEDO75530 441 aaKnown RBP11.04□□□□□ -0.64
VCL-202ENST00000372755 FGF3P11487 239 aaPredicted RBP11.04□□□□□ -0.64
VCL-202ENST00000372755 ZNF14P17017 642 aaPredicted RBP11.04□□□□□ -0.64
VCL-202ENST00000372755 FASLGP48023 281 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 RAET1LQ5VY80 246 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 GPR137CQ8N3F9 429 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 CSNK1A1LQ8N752 337 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 ZBTB8BQ8NAP8 495 aaPredicted RBP11.04□□□□□ -0.64
VCL-202ENST00000372755 CHPT1Q8WUD6 406 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 SLC45A3Q96JT2 553 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 EIF5A2Q9GZV4 153 aaKnown RBP11.04□□□□□ -0.64
VCL-202ENST00000372755 MAGIXQ9H6Y5 334 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 ZNF442Q9H7R0 627 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 PIRO00625 290 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 CDC123O75794 336 aaPredicted RBP11.04□□□□□ -0.64
VCL-202ENST00000372755 ATE1O95260 518 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 UCHL1P09936 223 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 GCGRP47871 477 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 CTC1Q2NKJ3 1217 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 LHFPL3Q86UP9 236 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 RNF38Q9H0F5 515 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 UBE2J1Q9Y385 318 aaPredicted RBP11.04□□□□□ -0.64
VCL-202ENST00000372755 NFAT5O94916 1531 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 TRBV2A0A0J9YWF9 115 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 VSTM2BA6NLU5 285 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 RELL1Q8IUW5 271 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 LIX1LQ8IVB5 337 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 CNIH3Q8TBE1 160 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 TBC1D15Q8TC07 691 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 FKBP10Q96AY3 582 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 IMP4Q96G21 291 aaKnown RBP11.04□□□□□ -0.64
VCL-202ENST00000372755 MSLNLQ96KJ4 702 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 C7orf34Q96L11 122 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 MUS81Q96NY9 551 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 FBRSL1Q9HCM7 1045 aaKnown RBP11.04□□□□□ -0.64
VCL-202ENST00000372755 SOCS2O14508 198 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 RFPL1O75677 317 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 F2P00734 622 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 NDUFV2P19404 249 aa11.04□□□□□ -0.64
VCL-202ENST00000372755 POLR2HP52434 150 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms