RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.14■□□□□ 0.01
C9orf78-201ENST00000372447 TRIML2Q8N7C3 387 aa15.14■□□□□ 0.01
C9orf78-201ENST00000372447 OR10Q1Q8NGQ4 319 aa15.14■□□□□ 0.01
C9orf78-201ENST00000372447 CMKLR1Q99788 373 aa15.14■□□□□ 0.01
C9orf78-201ENST00000372447 PDE7BQ9NP56 450 aa15.14■□□□□ 0.01
C9orf78-201ENST00000372447 MIEF1Q9NQG6 463 aa15.14■□□□□ 0.01
C9orf78-201ENST00000372447 TMEM184CQ9NVA4 438 aa15.14■□□□□ 0.01
C9orf78-201ENST00000372447 SNX7Q9UNH6 387 aa15.14■□□□□ 0.01
C9orf78-201ENST00000372447 WBP11Q9Y2W2 641 aaKnown RBP15.14■□□□□ 0.01
C9orf78-201ENST00000372447 MAGED1Q9Y5V3 778 aaPredicted RBP15.14■□□□□ 0.01
C9orf78-201ENST00000372447 H3BNH8 94 aa15.13■□□□□ 0.01
C9orf78-201ENST00000372447 RTCAO00442 366 aaKnown RBP15.13■□□□□ 0.01
C9orf78-201ENST00000372447 CTSVO60911 334 aa15.13■□□□□ 0.01
C9orf78-201ENST00000372447 HPRP00739 348 aa15.13■□□□□ 0.01
C9orf78-201ENST00000372447 ALPLP05186 524 aa15.13■□□□□ 0.01
C9orf78-201ENST00000372447 TFAP2AP05549 437 aa15.13■□□□□ 0.01
C9orf78-201ENST00000372447 NUDT7P0C024 238 aa15.13■□□□□ 0.01
C9orf78-201ENST00000372447 CCL4P13236 92 aa15.13■□□□□ 0.01
C9orf78-201ENST00000372447 FOLR1P15328 257 aa15.13■□□□□ 0.01
C9orf78-201ENST00000372447 RPL5P46777 297 aaKnown RBP15.13■□□□□ 0.01
C9orf78-201ENST00000372447 MAPK12P53778 367 aa15.13■□□□□ 0.01
C9orf78-201ENST00000372447 IST1P53990 364 aa15.13■□□□□ 0.01
C9orf78-201ENST00000372447 MYBPC3Q14896 1274 aa15.13■□□□□ 0.01
C9orf78-201ENST00000372447 PRSS53Q2L4Q9 553 aa15.13■□□□□ 0.01
C9orf78-201ENST00000372447 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.13■□□□□ 0.01
C9orf78-201ENST00000372447 FBXO42Q6P3S6 717 aa15.13■□□□□ 0.01
C9orf78-201ENST00000372447 RAB11FIP2Q7L804 512 aa15.13■□□□□ 0.01
C9orf78-201ENST00000372447 ADCK2Q7Z695 626 aa15.13■□□□□ 0.01
C9orf78-201ENST00000372447 PAQR7Q86WK9 346 aa15.13■□□□□ 0.01
C9orf78-201ENST00000372447 RMND5BQ96G75 393 aaPredicted RBP15.13■□□□□ 0.01
C9orf78-201ENST00000372447 FBXL20Q96IG2 436 aa15.13■□□□□ 0.01
C9orf78-201ENST00000372447 QRFPRQ96P65 431 aa15.13■□□□□ 0.01
C9orf78-201ENST00000372447 FCRL4Q96PJ5 515 aa15.13■□□□□ 0.01
C9orf78-201ENST00000372447 SLC35A5Q9BS91 424 aa15.13■□□□□ 0.01
C9orf78-201ENST00000372447 CHRNA10Q9GZZ6 450 aa15.13■□□□□ 0.01
C9orf78-201ENST00000372447 KIF26BQ2KJY2 2108 aa15.13■□□□□ 0.01
C9orf78-201ENST00000372447 PTPRBP23467 1997 aa15.13■□□□□ 0.01
C9orf78-201ENST00000372447 A0A1W2PRB8 838 aa15.13■□□□□ 0.01
C9orf78-201ENST00000372447 PMS2P1A4D2B8 440 aa15.13■□□□□ 0.01
C9orf78-201ENST00000372447 H0YAE9 185 aa15.13■□□□□ 0.01
C9orf78-201ENST00000372447 LCMT2O60294 686 aaKnown RBP15.13■□□□□ 0.01
C9orf78-201ENST00000372447 PABPC4LP0CB38 370 aaKnown RBP15.13■□□□□ 0.01
C9orf78-201ENST00000372447 ATP6V1B1P15313 513 aa15.13■□□□□ 0.01
C9orf78-201ENST00000372447 DDCP20711 480 aa15.13■□□□□ 0.01
C9orf78-201ENST00000372447 MLLT3P42568 568 aaPredicted RBP15.13■□□□□ 0.01
C9orf78-201ENST00000372447 GABRA4P48169 554 aa15.13■□□□□ 0.01
C9orf78-201ENST00000372447 ADARB1P78563 741 aaKnown RBP15.13■□□□□ 0.01
C9orf78-201ENST00000372447 CBLL1Q75N03 491 aa15.13■□□□□ 0.01
C9orf78-201ENST00000372447 EIF3MQ7L2H7 374 aaKnown RBP15.13■□□□□ 0.01
C9orf78-201ENST00000372447 PLD3Q8IV08 490 aa15.13■□□□□ 0.01
C9orf78-201ENST00000372447 ZDHHC21Q8IVQ6 265 aa15.13■□□□□ 0.01
C9orf78-201ENST00000372447 MMP21Q8N119 569 aa15.13■□□□□ 0.01
C9orf78-201ENST00000372447 DNAJC22Q8N4W6 341 aa15.13■□□□□ 0.01
C9orf78-201ENST00000372447 RGMAQ96B86 450 aa15.13■□□□□ 0.01
C9orf78-201ENST00000372447 TM4SF18Q96CE8 201 aa15.13■□□□□ 0.01
C9orf78-201ENST00000372447 YIPF3Q9GZM5 350 aa15.13■□□□□ 0.01
C9orf78-201ENST00000372447 SLC6A16Q9GZN6 736 aa15.13■□□□□ 0.01
C9orf78-201ENST00000372447 IL1RAPQ9NPH3 570 aa15.13■□□□□ 0.01
C9orf78-201ENST00000372447 SIDT1Q9NXL6 827 aaKnown RBP15.13■□□□□ 0.01
C9orf78-201ENST00000372447 TAS2R9Q9NYW1 312 aa15.13■□□□□ 0.01
C9orf78-201ENST00000372447 ANKMY1Q9P2S6 941 aa15.13■□□□□ 0.01
C9orf78-201ENST00000372447 PILRAQ9UKJ1 303 aa15.13■□□□□ 0.01
C9orf78-201ENST00000372447 FAF1Q9UNN5 650 aaPredicted RBP15.13■□□□□ 0.01
C9orf78-201ENST00000372447 WASF3Q9UPY6 502 aa15.13■□□□□ 0.01
C9orf78-201ENST00000372447 LOXL2Q9Y4K0 774 aa15.13■□□□□ 0.01
C9orf78-201ENST00000372447 HEATR5BQ9P2D3 2071 aa15.12■□□□□ 0.01
C9orf78-201ENST00000372447 CCDC187A0A096LP49 1063 aa15.12■□□□□ 0.01
C9orf78-201ENST00000372447 EFCAB7A8K855 629 aa15.12■□□□□ 0.01
C9orf78-201ENST00000372447 HAT1O14929 419 aa15.12■□□□□ 0.01
C9orf78-201ENST00000372447 NDUFS4O43181 175 aa15.12■□□□□ 0.01
C9orf78-201ENST00000372447 CLEC3AO75596 197 aa15.12■□□□□ 0.01
C9orf78-201ENST00000372447 ALBP02768 609 aa15.12■□□□□ 0.01
C9orf78-201ENST00000372447 SEMG1P04279 462 aa15.12■□□□□ 0.01
C9orf78-201ENST00000372447 ITIH1P19827 911 aa15.12■□□□□ 0.01
C9orf78-201ENST00000372447 PCGF2P35227 344 aa15.12■□□□□ 0.01
C9orf78-201ENST00000372447 CRATP43155 626 aa15.12■□□□□ 0.01
C9orf78-201ENST00000372447 MVDP53602 400 aa15.12■□□□□ 0.01
C9orf78-201ENST00000372447 DEFB110Q30KQ9 67 aa15.12■□□□□ 0.01
C9orf78-201ENST00000372447 ANGPTL8Q6UXH0 198 aa15.12■□□□□ 0.01
C9orf78-201ENST00000372447 GALNT10Q86SR1 603 aa15.12■□□□□ 0.01
C9orf78-201ENST00000372447 SATL1Q86VE3 508 aa15.12■□□□□ 0.01
C9orf78-201ENST00000372447 NUDT13Q86X67 352 aa15.12■□□□□ 0.01
C9orf78-201ENST00000372447 BMPERQ8N8U9 685 aa15.12■□□□□ 0.01
C9orf78-201ENST00000372447 TSPAN14Q8NG11 270 aa15.12■□□□□ 0.01
C9orf78-201ENST00000372447 TTLQ8NG68 377 aa15.12■□□□□ 0.01
C9orf78-201ENST00000372447 OR52N2Q8NGI0 321 aa15.12■□□□□ 0.01
C9orf78-201ENST00000372447 OR5K1Q8NHB7 308 aa15.12■□□□□ 0.01
C9orf78-201ENST00000372447 OSBPL10Q9BXB5 764 aa15.12■□□□□ 0.01
C9orf78-201ENST00000372447 SYNPO2LQ9H987 977 aa15.12■□□□□ 0.01
C9orf78-201ENST00000372447 CLK4Q9HAZ1 481 aaKnown RBP15.12■□□□□ 0.01
C9orf78-201ENST00000372447 LHX9Q9NQ69 397 aa15.12■□□□□ 0.01
C9orf78-201ENST00000372447 GPATCH2Q9NW75 528 aa15.12■□□□□ 0.01
C9orf78-201ENST00000372447 AKAP7Q9P0M2 348 aaPredicted RBP15.12■□□□□ 0.01
C9orf78-201ENST00000372447 ADAM29Q9UKF5 820 aa15.12■□□□□ 0.01
C9orf78-201ENST00000372447 AP1M2Q9Y6Q5 423 aa15.12■□□□□ 0.01
C9orf78-201ENST00000372447 A0A0J9YVX5 310 aa15.11■□□□□ 0.01
C9orf78-201ENST00000372447 SMIM31A0A1B0GVY4 71 aa15.11■□□□□ 0.01
C9orf78-201ENST00000372447 TRBC2A0A5B9 178 aa15.11■□□□□ 0.01
C9orf78-201ENST00000372447 CLIC3O95833 236 aa15.11■□□□□ 0.01
C9orf78-201ENST00000372447 THRBP10828 461 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms