RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 OXSMQ9NWU1 459 aa17.55■□□□□ 0.4
CKS1B-203ENST00000368439 NMRK1Q9NWW6 199 aa17.55■□□□□ 0.4
CKS1B-203ENST00000368439 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.55■□□□□ 0.4
CKS1B-203ENST00000368439 ERVK-19Q9WJR5 959 aa17.55■□□□□ 0.4
CKS1B-203ENST00000368439 KLF13Q9Y2Y9 288 aaPredicted RBP17.55■□□□□ 0.4
CKS1B-203ENST00000368439 TIMM22Q9Y584 194 aa17.55■□□□□ 0.4
CKS1B-203ENST00000368439 V9GYY5 206 aaPredicted RBP17.55■□□□□ 0.4
CKS1B-203ENST00000368439 A8MVJ9 347 aa17.54■□□□□ 0.4
CKS1B-203ENST00000368439 PEX1O43933 1283 aa17.54■□□□□ 0.4
CKS1B-203ENST00000368439 CT62P0C5K7 136 aa17.54■□□□□ 0.4
CKS1B-203ENST00000368439 PIK3R1P27986 724 aa17.54■□□□□ 0.4
CKS1B-203ENST00000368439 HMOX2P30519 316 aa17.54■□□□□ 0.4
CKS1B-203ENST00000368439 MEOX1P50221 254 aa17.54■□□□□ 0.4
CKS1B-203ENST00000368439 NAGLUP54802 743 aa17.54■□□□□ 0.4
CKS1B-203ENST00000368439 SLC37A1P57057 533 aa17.54■□□□□ 0.4
CKS1B-203ENST00000368439 RAE1P78406 368 aaKnown RBP17.54■□□□□ 0.4
CKS1B-203ENST00000368439 ZNF267Q14586 743 aaPredicted RBP17.54■□□□□ 0.4
CKS1B-203ENST00000368439 ZNF750Q32MQ0 723 aa17.54■□□□□ 0.4
CKS1B-203ENST00000368439 PIGGQ5H8A4 983 aa17.54■□□□□ 0.4
CKS1B-203ENST00000368439 C1QL3Q5VWW1 255 aa17.54■□□□□ 0.4
CKS1B-203ENST00000368439 SLC48A1Q6P1K1 146 aa17.54■□□□□ 0.4
CKS1B-203ENST00000368439 EMBQ6PCB8 327 aa17.54■□□□□ 0.4
CKS1B-203ENST00000368439 LYPD8Q6UX82 237 aa17.54■□□□□ 0.4
CKS1B-203ENST00000368439 FRMD7Q6ZUT3 714 aa17.54■□□□□ 0.4
CKS1B-203ENST00000368439 TRABD2AQ86V40 505 aa17.54■□□□□ 0.4
CKS1B-203ENST00000368439 CHERPQ8IWX8 916 aaKnown RBP17.54■□□□□ 0.4
CKS1B-203ENST00000368439 GBP7Q8N8V2 638 aaPredicted RBP17.54■□□□□ 0.4
CKS1B-203ENST00000368439 PSD4Q8NDX1 1056 aa17.54■□□□□ 0.4
CKS1B-203ENST00000368439 OR4K14Q8NGD5 310 aa17.54■□□□□ 0.4
CKS1B-203ENST00000368439 CAVIN3Q969G5 261 aa17.54■□□□□ 0.4
CKS1B-203ENST00000368439 CNPPD1Q9BV87 410 aa17.54■□□□□ 0.4
CKS1B-203ENST00000368439 CXorf21Q9HAI6 301 aa17.54■□□□□ 0.4
CKS1B-203ENST00000368439 TNFRSF12AQ9NP84 129 aa17.54■□□□□ 0.4
CKS1B-203ENST00000368439 MID1IP1Q9NPA3 183 aa17.54■□□□□ 0.4
CKS1B-203ENST00000368439 HPF1Q9NWY4 346 aa17.54■□□□□ 0.4
CKS1B-203ENST00000368439 MKS1Q9NXB0 559 aa17.54■□□□□ 0.4
CKS1B-203ENST00000368439 LGALS13Q9UHV8 139 aa17.54■□□□□ 0.4
CKS1B-203ENST00000368439 TLDC2A0PJX2 215 aa17.53■□□□□ 0.4
CKS1B-203ENST00000368439 C1orf226A1L170 272 aa17.53■□□□□ 0.4
CKS1B-203ENST00000368439 NPIPA5E9PKD4 350 aa17.53■□□□□ 0.4
CKS1B-203ENST00000368439 DYRK3O43781 588 aa17.53■□□□□ 0.4
CKS1B-203ENST00000368439 OR10H2O60403 315 aa17.53■□□□□ 0.4
CKS1B-203ENST00000368439 CPMP14384 443 aa17.53■□□□□ 0.4
CKS1B-203ENST00000368439 CPA3P15088 417 aa17.53■□□□□ 0.4
CKS1B-203ENST00000368439 SOX18P35713 384 aa17.53■□□□□ 0.4
CKS1B-203ENST00000368439 XKP51811 444 aa17.53■□□□□ 0.4
CKS1B-203ENST00000368439 NAA20P61599 178 aa17.53■□□□□ 0.4
CKS1B-203ENST00000368439 TRA2BP62995 288 aaKnown RBP17.53■□□□□ 0.4
CKS1B-203ENST00000368439 HMGCS1Q01581 520 aa17.53■□□□□ 0.4
CKS1B-203ENST00000368439 ASPHQ12797 758 aa17.53■□□□□ 0.4
CKS1B-203ENST00000368439 KRTCAP3Q53RY4 240 aa17.53■□□□□ 0.4
CKS1B-203ENST00000368439 RIBC1Q8N443 379 aaPredicted RBP17.53■□□□□ 0.4
CKS1B-203ENST00000368439 BANPQ8N9N5 519 aa17.53■□□□□ 0.4
CKS1B-203ENST00000368439 ZFP62Q8NB50 900 aaPredicted RBP17.53■□□□□ 0.4
CKS1B-203ENST00000368439 POGLUT1Q8NBL1 392 aa17.53■□□□□ 0.4
CKS1B-203ENST00000368439 C16orf52Q8NHV5 167 aa17.53■□□□□ 0.4
CKS1B-203ENST00000368439 APIPQ96GX9 242 aa17.53■□□□□ 0.4
CKS1B-203ENST00000368439 TIMMDC1Q9NPL8 285 aa17.53■□□□□ 0.4
CKS1B-203ENST00000368439 PLEKHB1Q9UF11 243 aaPredicted RBP17.53■□□□□ 0.4
CKS1B-203ENST00000368439 MCM8Q9UJA3 840 aa17.53■□□□□ 0.4
CKS1B-203ENST00000368439 NPIPA1Q9UND3 350 aa17.53■□□□□ 0.4
CKS1B-203ENST00000368439 ERVK-11Q9UQG0 969 aa17.53■□□□□ 0.4
CKS1B-203ENST00000368439 ZNF835Q9Y2P0 537 aa17.53■□□□□ 0.4
CKS1B-203ENST00000368439 EXPH5Q8NEV8 1989 aa17.52■□□□□ 0.4
CKS1B-203ENST00000368439 PINLYPA6NC86 204 aa17.52■□□□□ 0.4
CKS1B-203ENST00000368439 KLRC4-KLRK1H3BQV0 150 aa17.52■□□□□ 0.4
CKS1B-203ENST00000368439 ASNA1O43681 348 aa17.52■□□□□ 0.4
CKS1B-203ENST00000368439 GUCY1B2O75343 617 aa17.52■□□□□ 0.4
CKS1B-203ENST00000368439 CLDN1O95832 211 aa17.52■□□□□ 0.4
CKS1B-203ENST00000368439 ZNF24P17028 368 aa17.52■□□□□ 0.4
CKS1B-203ENST00000368439 SSTR4P31391 388 aa17.52■□□□□ 0.4
CKS1B-203ENST00000368439 GPR85P60893 370 aa17.52■□□□□ 0.4
CKS1B-203ENST00000368439 MGAT2Q10469 447 aa17.52■□□□□ 0.4
CKS1B-203ENST00000368439 FUT7Q11130 342 aa17.52■□□□□ 0.4
CKS1B-203ENST00000368439 PCLAFQ15004 111 aa17.52■□□□□ 0.4
CKS1B-203ENST00000368439 EBPQ15125 230 aaKnown RBP17.52■□□□□ 0.4
CKS1B-203ENST00000368439 SCIMPQ6UWF3 145 aa17.52■□□□□ 0.4
CKS1B-203ENST00000368439 RNF111Q6ZNA4 994 aa17.52■□□□□ 0.4
CKS1B-203ENST00000368439 ZNF441Q8N8Z8 693 aa17.52■□□□□ 0.4
CKS1B-203ENST00000368439 SH2D2AQ9NP31 389 aa17.52■□□□□ 0.4
CKS1B-203ENST00000368439 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.52■□□□□ 0.4
CKS1B-203ENST00000368439 SIRT5Q9NXA8 310 aa17.52■□□□□ 0.4
CKS1B-203ENST00000368439 HEY2Q9UBP5 337 aa17.52■□□□□ 0.4
CKS1B-203ENST00000368439 PLLPQ9Y342 182 aa17.52■□□□□ 0.4
CKS1B-203ENST00000368439 A0A0G2JMM0 328 aa17.51■□□□□ 0.39
CKS1B-203ENST00000368439 A0A1B0GUH1 482 aa17.51■□□□□ 0.39
CKS1B-203ENST00000368439 A0A1W2PPB8 328 aa17.51■□□□□ 0.39
CKS1B-203ENST00000368439 A0A1W2PRS3 328 aa17.51■□□□□ 0.39
CKS1B-203ENST00000368439 OR6C76A6NM76 312 aa17.51■□□□□ 0.39
CKS1B-203ENST00000368439 KIR3DP1A8MWS1 328 aa17.51■□□□□ 0.39
CKS1B-203ENST00000368439 ESPNB1AK53 854 aa17.51■□□□□ 0.39
CKS1B-203ENST00000368439 PORP16435 677 aaPredicted RBP17.51■□□□□ 0.39
CKS1B-203ENST00000368439 S1PR1P21453 382 aa17.51■□□□□ 0.39
CKS1B-203ENST00000368439 RFC3P40938 356 aa17.51■□□□□ 0.39
CKS1B-203ENST00000368439 CA7P43166 264 aa17.51■□□□□ 0.39
CKS1B-203ENST00000368439 DUSP2Q05923 314 aa17.51■□□□□ 0.39
CKS1B-203ENST00000368439 ERCC6LQ2NKX8 1250 aa17.51■□□□□ 0.39
CKS1B-203ENST00000368439 ZNF791Q3KP31 576 aaPredicted RBP17.51■□□□□ 0.39
CKS1B-203ENST00000368439 LIPMQ5VYY2 423 aa17.51■□□□□ 0.39
CKS1B-203ENST00000368439 GALNT18Q6P9A2 607 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms