RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 SLC46A2Q9BY10 475 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 CCDC59Q9P031 241 aaKnown RBP12.31□□□□□ -0.44
PTPRK-207ENST00000368226 RNF6Q9Y252 685 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 TEX13DA0A0J9YY54 714 aaPredicted RBP12.31□□□□□ -0.44
PTPRK-207ENST00000368226 YY2O15391 372 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 CHP2O43745 196 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 MT-ND5P03915 603 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 OPN1LWP04000 364 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 RLN2P04090 185 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 DNAJB1P25685 340 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 GPR26Q8NDV2 337 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 C16orf78Q8WTQ4 265 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 PDLIM7Q9NR12 457 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 SH3BGRL2Q9UJC5 107 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 CHD2O14647 1828 aaKnown RBP12.31□□□□□ -0.44
PTPRK-207ENST00000368226 FAM171A2A8MVW0 826 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 FXYD6P3P58550 94 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 VMACQ2NL98 169 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 TMEM135Q86UB9 458 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 PIP5K1AQ99755 562 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 ZNF701Q9NV72 531 aaPredicted RBP12.31□□□□□ -0.44
PTPRK-207ENST00000368226 KCNS2Q9ULS6 477 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 CD8B2A6NJW9 211 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 CD8BP10966 210 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 MYOGP15173 224 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 CELP19835 753 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 CTBP2P56545 445 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 FIP1L1Q6UN15 594 aaKnown RBP12.31□□□□□ -0.44
PTPRK-207ENST00000368226 UBE2Q1Q7Z7E8 422 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 TMEM151BQ8IW70 566 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 SCRN2Q96FV2 425 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 MNTQ99583 582 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 APOOQ9BUR5 198 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 IL26Q9NPH9 171 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 ABLIM1O14639 778 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 ZNF217O75362 1048 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 KDM4BO94953 1096 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 FARS2O95363 451 aaKnown RBP12.31□□□□□ -0.44
PTPRK-207ENST00000368226 S100A9P06702 114 aaKnown RBP12.31□□□□□ -0.44
PTPRK-207ENST00000368226 SYPP08247 313 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 LAMP1P11279 417 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 PRKCAP17252 672 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 ARSFP54793 590 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 MAP4K2Q12851 820 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 PTPRRQ15256 657 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 GTDC1Q4AE62 458 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 NDUFAF5Q5TEU4 345 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 SHQ1Q6PI26 577 aaKnown RBP12.31□□□□□ -0.44
PTPRK-207ENST00000368226 LINC00471Q8N535 108 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 FANCFQ9NPI8 374 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 AIG1Q9NVV5 245 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 FBXO9Q9UK97 447 aaPredicted RBP12.31□□□□□ -0.44
PTPRK-207ENST00000368226 TRAV6A0A075B6T7 132 aa12.3□□□□□ -0.44
PTPRK-207ENST00000368226 A6NLC8 198 aa12.3□□□□□ -0.44
PTPRK-207ENST00000368226 HLA-DPB1P04440 258 aa12.3□□□□□ -0.44
PTPRK-207ENST00000368226 PROS1P07225 676 aa12.3□□□□□ -0.44
PTPRK-207ENST00000368226 GXYLT1Q4G148 440 aa12.3□□□□□ -0.44
PTPRK-207ENST00000368226 THAP4Q8WY91 577 aa12.3□□□□□ -0.44
PTPRK-207ENST00000368226 PTERQ96BW5 349 aa12.3□□□□□ -0.44
PTPRK-207ENST00000368226 SLC22A4Q9H015 551 aa12.3□□□□□ -0.44
PTPRK-207ENST00000368226 C1orf21Q9H246 121 aa12.3□□□□□ -0.44
PTPRK-207ENST00000368226 SUSD2Q9UGT4 822 aa12.3□□□□□ -0.44
PTPRK-207ENST00000368226 GPR52Q9Y2T5 361 aa12.3□□□□□ -0.44
PTPRK-207ENST00000368226 DNAJC15Q9Y5T4 150 aa12.3□□□□□ -0.44
PTPRK-207ENST00000368226 MYH1P12882 1939 aa12.3□□□□□ -0.44
PTPRK-207ENST00000368226 HTRA2O43464 458 aaPredicted RBP12.3□□□□□ -0.44
PTPRK-207ENST00000368226 SFTPDP35247 375 aa12.3□□□□□ -0.44
PTPRK-207ENST00000368226 KANK2Q63ZY3 851 aa12.3□□□□□ -0.44
PTPRK-207ENST00000368226 RDH12Q96NR8 316 aa12.3□□□□□ -0.44
PTPRK-207ENST00000368226 FUZQ9BT04 418 aa12.3□□□□□ -0.44
PTPRK-207ENST00000368226 IGSF5Q9NSI5 407 aa12.3□□□□□ -0.44
PTPRK-207ENST00000368226 ANKMY1Q9P2S6 941 aa12.3□□□□□ -0.44
PTPRK-207ENST00000368226 TMEM5Q9Y2B1 443 aa12.3□□□□□ -0.44
PTPRK-207ENST00000368226 PADI2Q9Y2J8 665 aa12.3□□□□□ -0.44
PTPRK-207ENST00000368226 MEMO1Q9Y316 297 aa12.3□□□□□ -0.44
PTPRK-207ENST00000368226 NOP16Q9Y3C1 178 aaKnown RBP12.3□□□□□ -0.44
PTPRK-207ENST00000368226 PCDHGA6Q9Y5G7 932 aa12.3□□□□□ -0.44
PTPRK-207ENST00000368226 METTL21EPA6NDL7 271 aa12.3□□□□□ -0.44
PTPRK-207ENST00000368226 CYP17A1P05093 508 aa12.3□□□□□ -0.44
PTPRK-207ENST00000368226 C8BP07358 591 aa12.3□□□□□ -0.44
PTPRK-207ENST00000368226 GCGRP47871 477 aa12.3□□□□□ -0.44
PTPRK-207ENST00000368226 ATP4BP51164 291 aa12.3□□□□□ -0.44
PTPRK-207ENST00000368226 ST3GAL4Q11206 333 aa12.3□□□□□ -0.44
PTPRK-207ENST00000368226 OR52E8Q6IFG1 317 aa12.3□□□□□ -0.44
PTPRK-207ENST00000368226 TCEAL8Q8IYN2 117 aa12.3□□□□□ -0.44
PTPRK-207ENST00000368226 OR2T33Q8NG76 320 aa12.3□□□□□ -0.44
PTPRK-207ENST00000368226 OR9A2Q8NGT5 310 aa12.3□□□□□ -0.44
PTPRK-207ENST00000368226 OR14L1PQ8NHC6 308 aa12.3□□□□□ -0.44
PTPRK-207ENST00000368226 CMAHPQ9Y471 501 aa12.3□□□□□ -0.44
PTPRK-207ENST00000368226 A8MV72 311 aaPredicted RBP12.3□□□□□ -0.44
PTPRK-207ENST00000368226 ARL6IP5O75915 188 aa12.3□□□□□ -0.44
PTPRK-207ENST00000368226 ZNF84P51523 738 aa12.3□□□□□ -0.44
PTPRK-207ENST00000368226 C6orf132Q5T0Z8 1188 aa12.3□□□□□ -0.44
PTPRK-207ENST00000368226 COMMD6Q7Z4G1 85 aa12.3□□□□□ -0.44
PTPRK-207ENST00000368226 CCDC36Q8IYA8 594 aa12.3□□□□□ -0.44
PTPRK-207ENST00000368226 CCNL2Q96S94 520 aaPredicted RBP12.3□□□□□ -0.44
PTPRK-207ENST00000368226 CLSTN3Q9BQT9 956 aa12.3□□□□□ -0.44
PTPRK-207ENST00000368226 CXCL16Q9H2A7 254 aa12.3□□□□□ -0.44
PTPRK-207ENST00000368226 PRSS21Q9Y6M0 314 aa12.3□□□□□ -0.44
PTPRK-207ENST00000368226 H3BML4 177 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms