RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 DPAGT1Q9H3H5 408 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 TMPRSS4Q9NRS4 437 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 SNTG1Q9NSN8 517 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 COMMD3Q9UBI1 195 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 ENTPD2Q9Y5L3 495 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 KIR2DS5A0A0G2JLQ3 304 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 A0A0G2JNG1 304 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 SOWAHBA6NEL2 793 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 KIR2DS3K7RE56 304 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 M0QZ24 198 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 INSIG1O15503 277 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 SLC34A2O95436 690 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 CYBAP13498 195 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 PEX2P28328 305 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 L1CAMP32004 1257 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 SCAND1P57086 179 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 RPS23P62266 143 aaKnown RBP8.28□□□□□ -1.08
SYNE1-206ENST00000367253 ACTA2P62736 377 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 RPL38P63173 70 aaKnown RBP8.28□□□□□ -1.08
SYNE1-206ENST00000367253 ACTG2P63267 376 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 ACTC1P68032 377 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 ACTA1P68133 377 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 TEKQ02763 1124 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 KIR2DS5Q14953 304 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 SLC9A3R2Q15599 337 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 HYAL4Q2M3T9 481 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 CLEC9AQ6UXN8 241 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 ABHD15Q6UXT9 468 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 LHFPL3Q86UP9 236 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 PDSS2Q86YH6 399 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 LACC1Q8IV20 430 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 TMEFF1Q8IYR6 380 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 ZBTB2Q8N680 514 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 KDF1Q8NAX2 398 aaPredicted RBP8.28□□□□□ -1.08
SYNE1-206ENST00000367253 TSEN15Q8WW01 171 aaKnown RBP8.28□□□□□ -1.08
SYNE1-206ENST00000367253 TRMOQ9BU70 441 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 IL1RAPQ9NPH3 570 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 FAM96BQ9Y3D0 163 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 UBR2Q8IWV8 1755 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 BTAF1O14981 1849 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 TEX13DA0A0J9YY54 714 aaPredicted RBP8.28□□□□□ -1.08
SYNE1-206ENST00000367253 C20orf202A1L168 122 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 SOBPA7XYQ1 873 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 MEIS3P2A8K0S8 358 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 ZNF850A8MQ14 1090 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 DNAJA2O60884 412 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 LRATO95237 230 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 RNH1P13489 461 aaKnown RBP8.28□□□□□ -1.08
SYNE1-206ENST00000367253 LCN1P31025 176 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 IRS1P35568 1242 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 MC3RP41968 323 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 GABRB2P47870 512 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 DRG2P55039 364 aaKnown RBP8.28□□□□□ -1.08
SYNE1-206ENST00000367253 SNRPD2P62316 118 aaKnown RBP8.28□□□□□ -1.08
SYNE1-206ENST00000367253 KLF10Q13118 480 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 COL9A2Q14055 689 aaPredicted RBP8.28□□□□□ -1.08
SYNE1-206ENST00000367253 LIPMQ5VYY2 423 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 GLYATQ6IB77 296 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 CES3Q6UWW8 571 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 TMCO2Q7Z6W1 182 aaPredicted RBP8.28□□□□□ -1.08
SYNE1-206ENST00000367253 ZNF598Q86UK7 904 aaKnown RBP8.28□□□□□ -1.08
SYNE1-206ENST00000367253 POC1BQ8TC44 478 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 VRK1Q99986 396 aaPredicted RBP8.28□□□□□ -1.08
SYNE1-206ENST00000367253 FUZQ9BT04 418 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 EGLN1Q9GZT9 426 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 BPIFA1Q9NP55 256 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 ZFP57Q9NU63 452 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 WNT16Q9UBV4 365 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 NRAPQ86VF7 1730 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 LOC100509620A0A075B734 347 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 HCN1O60741 890 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 RFPL3O75679 317 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 ZNF25P17030 456 aaPredicted RBP8.28□□□□□ -1.08
SYNE1-206ENST00000367253 CSNK2A2P19784 350 aaPredicted RBP8.28□□□□□ -1.08
SYNE1-206ENST00000367253 SLC6A6P31641 620 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 RPL26P61254 145 aaKnown RBP8.28□□□□□ -1.08
SYNE1-206ENST00000367253 TXNL4AP83876 142 aaKnown RBP8.28□□□□□ -1.08
SYNE1-206ENST00000367253 ARHGAP1Q07960 439 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 C1orf61Q13536 156 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 DPYSL3Q14195 570 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 TTLL10Q6ZVT0 673 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 USP30Q70CQ3 517 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 OR9A4Q8NGU2 314 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 GPR151Q8TDV0 419 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 C15orf40Q8WUR7 153 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 C22orf15Q8WYQ4 148 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 ADAD1Q96M93 576 aaKnown RBP8.28□□□□□ -1.08
SYNE1-206ENST00000367253 MRPL57Q9BQC6 102 aaKnown RBP8.28□□□□□ -1.08
SYNE1-206ENST00000367253 EFCAB11Q9BUY7 163 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 CLMPQ9H6B4 373 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 MEAF6Q9HAF1 191 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 TM7SF3Q9NS93 570 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 ZNF175Q9Y473 711 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 ROBO3Q96MS0 1386 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 hCG_1807616A0A1W2PRN6 198 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 APOC4-APOC2K7ER74 178 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 NUAK1O60285 661 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 BEST1O76090 585 aa8.28□□□□□ -1.08
SYNE1-206ENST00000367253 APOC2P02655 101 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms