RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 MRRFQ96E11 262 aaKnown RBP13.69□□□□□ -0.22
CTSD-202ENST00000367196 SERPINI1Q99574 410 aa13.69□□□□□ -0.22
CTSD-202ENST00000367196 ERVK-6Q9BXR3 956 aa13.69□□□□□ -0.22
CTSD-202ENST00000367196 PNPLA3Q9NST1 481 aa13.69□□□□□ -0.22
CTSD-202ENST00000367196 QPCTLQ9NXS2 382 aa13.69□□□□□ -0.22
CTSD-202ENST00000367196 TUBA8Q9NY65 449 aaPredicted RBP13.69□□□□□ -0.22
CTSD-202ENST00000367196 ACAD8Q9UKU7 415 aa13.69□□□□□ -0.22
CTSD-202ENST00000367196 ERVK-19Q9WJR5 959 aa13.69□□□□□ -0.22
CTSD-202ENST00000367196 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.69□□□□□ -0.22
CTSD-202ENST00000367196 INTS1Q8N201 2190 aaKnown RBP13.69□□□□□ -0.22
CTSD-202ENST00000367196 ADGRG4Q8IZF6 3080 aa13.69□□□□□ -0.22
CTSD-202ENST00000367196 TRGV5A0A0B4J1U4 118 aa13.68□□□□□ -0.22
CTSD-202ENST00000367196 ATP6AP2A0A1C7CYW4 349 aa13.68□□□□□ -0.22
CTSD-202ENST00000367196 TP53I11O14683 189 aa13.68□□□□□ -0.22
CTSD-202ENST00000367196 ATP6AP2O75787 350 aa13.68□□□□□ -0.22
CTSD-202ENST00000367196 RBP1P09455 135 aa13.68□□□□□ -0.22
CTSD-202ENST00000367196 FAM58BPP0C7Q3 252 aa13.68□□□□□ -0.22
CTSD-202ENST00000367196 SLC35E2P0CK97 266 aa13.68□□□□□ -0.22
CTSD-202ENST00000367196 CCNG1P51959 295 aa13.68□□□□□ -0.22
CTSD-202ENST00000367196 NUP107P57740 925 aa13.68□□□□□ -0.22
CTSD-202ENST00000367196 RPP38P78345 283 aaKnown RBP13.68□□□□□ -0.22
CTSD-202ENST00000367196 ZNF267Q14586 743 aaPredicted RBP13.68□□□□□ -0.22
CTSD-202ENST00000367196 TSNAXIP1Q2TAA8 658 aa13.68□□□□□ -0.22
CTSD-202ENST00000367196 HLA-DQA1Q5Y7H0 255 aa13.68□□□□□ -0.22
CTSD-202ENST00000367196 TTC19Q6DKK2 380 aaPredicted RBP13.68□□□□□ -0.22
CTSD-202ENST00000367196 MRM1Q6IN84 353 aaKnown RBP13.68□□□□□ -0.22
CTSD-202ENST00000367196 PAGE2Q7Z2X7 111 aa13.68□□□□□ -0.22
CTSD-202ENST00000367196 CDH24Q86UP0 819 aa13.68□□□□□ -0.22
CTSD-202ENST00000367196 LIX1Q8N485 282 aa13.68□□□□□ -0.22
CTSD-202ENST00000367196 OR5M9Q8NGP3 310 aa13.68□□□□□ -0.22
CTSD-202ENST00000367196 ZNF717Q9BY31 904 aaPredicted RBP13.68□□□□□ -0.22
CTSD-202ENST00000367196 WWTR1Q9GZV5 400 aa13.68□□□□□ -0.22
CTSD-202ENST00000367196 VPS11Q9H270 941 aa13.68□□□□□ -0.22
CTSD-202ENST00000367196 ACSS3Q9H6R3 686 aa13.68□□□□□ -0.22
CTSD-202ENST00000367196 ZNF703Q9H7S9 590 aaPredicted RBP13.68□□□□□ -0.22
CTSD-202ENST00000367196 SH2D2AQ9NP31 389 aa13.68□□□□□ -0.22
CTSD-202ENST00000367196 ZFP64Q9NPA5 681 aa13.68□□□□□ -0.22
CTSD-202ENST00000367196 AHSPQ9NZD4 102 aa13.68□□□□□ -0.22
CTSD-202ENST00000367196 PCDHGB3Q9Y5G1 929 aa13.68□□□□□ -0.22
CTSD-202ENST00000367196 HRH3Q9Y5N1 445 aa13.68□□□□□ -0.22
CTSD-202ENST00000367196 LIPGQ9Y5X9 500 aa13.68□□□□□ -0.22
CTSD-202ENST00000367196 HCFC1P51610 2035 aa13.68□□□□□ -0.22
CTSD-202ENST00000367196 F8P00451 2351 aa13.67□□□□□ -0.22
CTSD-202ENST00000367196 POLQO75417 2590 aa13.67□□□□□ -0.22
CTSD-202ENST00000367196 ESYT3A0FGR9 886 aa13.67□□□□□ -0.22
CTSD-202ENST00000367196 NKX2-6A6NCS4 301 aa13.67□□□□□ -0.22
CTSD-202ENST00000367196 STX16-NPEPL1H3BU86 382 aa13.67□□□□□ -0.22
CTSD-202ENST00000367196 STX16O14662 325 aa13.67□□□□□ -0.22
CTSD-202ENST00000367196 ZNF354AO60765 605 aaPredicted RBP13.67□□□□□ -0.22
CTSD-202ENST00000367196 SMIM24O75264 130 aa13.67□□□□□ -0.22
CTSD-202ENST00000367196 GUCY1B2O75343 617 aa13.67□□□□□ -0.22
CTSD-202ENST00000367196 TOXO94900 526 aa13.67□□□□□ -0.22
CTSD-202ENST00000367196 ALDOAP04075 364 aaKnown RBP13.67□□□□□ -0.22
CTSD-202ENST00000367196 FBXO45P0C2W1 286 aa13.67□□□□□ -0.22
CTSD-202ENST00000367196 IGFBP2P18065 325 aa13.67□□□□□ -0.22
CTSD-202ENST00000367196 PIK3R1P27986 724 aa13.67□□□□□ -0.22
CTSD-202ENST00000367196 BSGP35613 385 aa13.67□□□□□ -0.22
CTSD-202ENST00000367196 PIGAP37287 484 aa13.67□□□□□ -0.22
CTSD-202ENST00000367196 ZFP36L2P47974 494 aaKnown RBP13.67□□□□□ -0.22
CTSD-202ENST00000367196 SERPINB9P50453 376 aa13.67□□□□□ -0.22
CTSD-202ENST00000367196 NRG3P56975 720 aa13.67□□□□□ -0.22
CTSD-202ENST00000367196 SLC37A1P57057 533 aa13.67□□□□□ -0.22
CTSD-202ENST00000367196 EBPQ15125 230 aaKnown RBP13.67□□□□□ -0.22
CTSD-202ENST00000367196 TRADDQ15628 312 aa13.67□□□□□ -0.22
CTSD-202ENST00000367196 NTRK2Q16620 822 aa13.67□□□□□ -0.22
CTSD-202ENST00000367196 TECRLQ5HYJ1 363 aa13.67□□□□□ -0.22
CTSD-202ENST00000367196 C1orf185Q5T7R7 199 aa13.67□□□□□ -0.22
CTSD-202ENST00000367196 RELL1Q8IUW5 271 aa13.67□□□□□ -0.22
CTSD-202ENST00000367196 RNF175Q8N4F7 328 aa13.67□□□□□ -0.22
CTSD-202ENST00000367196 RPRMLQ8N4K4 120 aa13.67□□□□□ -0.22
CTSD-202ENST00000367196 PTGR2Q8N8N7 351 aaPredicted RBP13.67□□□□□ -0.22
CTSD-202ENST00000367196 WDR20Q8TBZ3 569 aa13.67□□□□□ -0.22
CTSD-202ENST00000367196 ZNF597Q96LX8 424 aa13.67□□□□□ -0.22
CTSD-202ENST00000367196 TTYH2Q9BSA4 534 aa13.67□□□□□ -0.22
CTSD-202ENST00000367196 NOL11Q9H8H0 719 aaKnown RBP13.67□□□□□ -0.22
CTSD-202ENST00000367196 ZDHHC18Q9NUE0 388 aa13.67□□□□□ -0.22
CTSD-202ENST00000367196 KCNN3Q9UGI6 736 aa13.67□□□□□ -0.22
CTSD-202ENST00000367196 ADAM29Q9UKF5 820 aa13.67□□□□□ -0.22
CTSD-202ENST00000367196 RNF11Q9Y3C5 154 aa13.67□□□□□ -0.22
CTSD-202ENST00000367196 ASB4Q9Y574 426 aa13.67□□□□□ -0.22
CTSD-202ENST00000367196 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.67□□□□□ -0.22
CTSD-202ENST00000367196 PDZD2O15018 2839 aa13.67□□□□□ -0.22
CTSD-202ENST00000367196 TEP1Q99973 2627 aaKnown RBP13.66□□□□□ -0.22
CTSD-202ENST00000367196 C2orf92A0A1B0GVN3 265 aa13.66□□□□□ -0.22
CTSD-202ENST00000367196 A0A1W2PR48 441 aa13.66□□□□□ -0.22
CTSD-202ENST00000367196 HMX2A2RU54 273 aa13.66□□□□□ -0.22
CTSD-202ENST00000367196 TMPRSS11DO60235 418 aa13.66□□□□□ -0.22
CTSD-202ENST00000367196 EEDO75530 441 aaKnown RBP13.66□□□□□ -0.22
CTSD-202ENST00000367196 PRKRAO75569 313 aaKnown RBP13.66□□□□□ -0.22
CTSD-202ENST00000367196 KRT38O76015 456 aa13.66□□□□□ -0.22
CTSD-202ENST00000367196 NADKO95544 446 aaPredicted RBP13.66□□□□□ -0.22
CTSD-202ENST00000367196 AIFM1O95831 613 aa13.66□□□□□ -0.22
CTSD-202ENST00000367196 CNTFP26441 200 aa13.66□□□□□ -0.22
CTSD-202ENST00000367196 PEX19P40855 299 aa13.66□□□□□ -0.22
CTSD-202ENST00000367196 SLC7A5Q01650 507 aa13.66□□□□□ -0.22
CTSD-202ENST00000367196 TFF3Q07654 80 aa13.66□□□□□ -0.22
CTSD-202ENST00000367196 IFT88Q13099 833 aa13.66□□□□□ -0.22
CTSD-202ENST00000367196 RPS6KA2Q15349 733 aa13.66□□□□□ -0.22
CTSD-202ENST00000367196 SLC25A35Q3KQZ1 300 aa13.66□□□□□ -0.22
CTSD-202ENST00000367196 PRAMEF20Q5VT98 475 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms